; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G004700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G004700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionethylene-responsive transcription factor SHINE 2-like
Genome locationCmo_Chr09:2110532..2112508
RNA-Seq ExpressionCmoCh09G004700
SyntenyCmoCh09G004700
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591574.1 Ethylene-responsive transcription factor SHINE 3, partial [Cucurbita argyrosperma subsp. sororia]7.8e-10599.47Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
        PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTS+EPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS

KAG7024462.1 Ethylene-responsive transcription factor SHINE 3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-10398.44Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEAS--HGHGSSPMTPKALSELLSTKLRKCC
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEAS  HGHGSSPMTPKALSELLSTKLRKCC
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEAS--HGHGSSPMTPKALSELLSTKLRKCC

Query:  KNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
        KNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTS+EPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
Subjt:  KNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS

XP_022936544.1 ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita moschata]3.5e-105100Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
        PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS

XP_022936545.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata]3.5e-105100Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
        PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS

XP_022976202.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita maxima]9.6e-10398.44Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEAS--HGHGSSPMTPKALSELLSTKLRKCC
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEAS  HGHGSSPMTPKALSELLSTKLRKCC
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEAS--HGHGSSPMTPKALSELLSTKLRKCC

Query:  KNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
        KNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQE DGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
Subjt:  KNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS

TrEMBL top hitse value%identityAlignment
A0A0A0LJA8 AP2/ERF domain-containing protein8.8e-9489.39Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKD S EASHGHGSSPM+PKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDG--------HRNGIDEEDRIAMQMIEELLNWNCPLPSISS
        PSPSLTCLRLD DNAHIGVWQKRAGTRATSNWVMRIELGKKE+    PSPESTSQE DG        H+N IDEEDRIAMQMIEELLNWNCPLPS SS
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDG--------HRNGIDEEDRIAMQMIEELLNWNCPLPSISS

A0A6J1F8L5 ethylene-responsive transcription factor SHINE 2 isoform X11.7e-105100Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
        PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS

A0A6J1FE03 ethylene-responsive transcription factor SHINE 2 isoform X21.7e-105100Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
        PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS

A0A6J1IGA2 ethylene-responsive transcription factor SHINE 2 isoform X14.6e-10398.44Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEAS--HGHGSSPMTPKALSELLSTKLRKCC
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEAS  HGHGSSPMTPKALSELLSTKLRKCC
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEAS--HGHGSSPMTPKALSELLSTKLRKCC

Query:  KNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
        KNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQE DGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
Subjt:  KNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS

A0A6J1IIU8 ethylene-responsive transcription factor SHINE 2 isoform X24.6e-10398.44Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEAS--HGHGSSPMTPKALSELLSTKLRKCC
        MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEAS  HGHGSSPMTPKALSELLSTKLRKCC
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEAS--HGHGSSPMTPKALSELLSTKLRKCC

Query:  KNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
        KNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQE DGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS
Subjt:  KNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS

SwissProt top hitse value%identityAlignment
P16146 Protein PPLZ021.4e-1953.76Show/hide
Query:  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKC
        +++RG RQR WGSWVSEIRH +LK R+W GTF++AEDAARAYD+AA LM G  A+TNFP + + S  +S          K LS  L  KL +C
Subjt:  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKC

Q3E958 Ethylene-responsive transcription factor SHINE 36.1e-6063.04Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
        MV+S+KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAE AARAYDQAA+LMNGQ+AKTNFP  K   +  S    S+  +PK+LSELL+ KLRK CK+
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCP
         +P LTCLRLD+D++HIGVWQKRAG++ + NWV  +ELG K   +  P  +  + +       + E+D++AMQMIEELLNW CP
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCP

Q94AW5 Ethylene-responsive transcription factor ERF0031.0e-2260.22Show/hide
Query:  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKC
        ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAEDAARAYD+AA LM G  A+TNFP + +    +S          K LS  L+ KL KC
Subjt:  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKC

Q9LFN7 Ethylene-responsive transcription factor SHINE 24.7e-6062.43Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSP-MTPKALSELLSTKLRKCCK
        MV+SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAA+LMNGQNAKTNFP  K +         +SP M+PK+LSELL+ KLRK CK
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSP-MTPKALSELLSTKLRKCCK

Query:  NPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLP------SPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWN
        + +PSLTCLRLD+D++HIGVWQKRAG++ +  WVMR+ELG     S +       + ++  +E +     I +ED++AM+MIEELLNW+
Subjt:  NPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLP------SPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWN

Q9XI33 Ethylene-responsive transcription factor WIN16.3e-5757.29Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHG--------SSPMTPKALSELLST
        MV ++KFRGVRQR WGSWV+EIRHPLLKRR+WLGTF+TAE+AARAYD+AA+LM+G+NAKTNFP + + + E S G          SS  +  +LS +LS 
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHG--------SSPMTPKALSELLST

Query:  KLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPES--------TSQEPDGHRNGI-DEEDRIAMQMIEELLNWN
        KLRKCCK+PSPSLTCLRLD+ ++HIGVWQKRAG+++ S+WVM +ELG         S  S        T  E  G R  + DEE+++A+QMIEELLN N
Subjt:  KLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPES--------TSQEPDGHRNGI-DEEDRIAMQMIEELLNWN

Arabidopsis top hitse value%identityAlignment
AT1G15360.1 Integrase-type DNA-binding superfamily protein4.5e-5857.29Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHG--------SSPMTPKALSELLST
        MV ++KFRGVRQR WGSWV+EIRHPLLKRR+WLGTF+TAE+AARAYD+AA+LM+G+NAKTNFP + + + E S G          SS  +  +LS +LS 
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHG--------SSPMTPKALSELLST

Query:  KLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPES--------TSQEPDGHRNGI-DEEDRIAMQMIEELLNWN
        KLRKCCK+PSPSLTCLRLD+ ++HIGVWQKRAG+++ S+WVM +ELG         S  S        T  E  G R  + DEE+++A+QMIEELLN N
Subjt:  KLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPES--------TSQEPDGHRNGI-DEEDRIAMQMIEELLNWN

AT5G11190.1 Integrase-type DNA-binding superfamily protein3.3e-6162.43Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSP-MTPKALSELLSTKLRKCCK
        MV+SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTF+TAE AARAYDQAA+LMNGQNAKTNFP  K +         +SP M+PK+LSELL+ KLRK CK
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSP-MTPKALSELLSTKLRKCCK

Query:  NPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLP------SPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWN
        + +PSLTCLRLD+D++HIGVWQKRAG++ +  WVMR+ELG     S +       + ++  +E +     I +ED++AM+MIEELLNW+
Subjt:  NPSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLP------SPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWN

AT5G25190.1 Integrase-type DNA-binding superfamily protein7.2e-2460.22Show/hide
Query:  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKC
        ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAEDAARAYD+AA LM G  A+TNFP + +    +S          K LS  L+ KL KC
Subjt:  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKC

AT5G25390.1 Integrase-type DNA-binding superfamily protein7.7e-5861.41Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
        MV+S+KFRGVRQRQWGSWVSEIRHPLL   VWLGTFDTAE AARAYDQAA+LMNGQ+AKTNFP  K   +  S    S+  +PK+LSELL+ KLRK CK+
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCP
         +P LTCLRLD+D++HIGVWQKRAG++ + NWV  +ELG K   +  P  +  + +       + E+D++AMQMIEELLNW CP
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCP

AT5G25390.2 Integrase-type DNA-binding superfamily protein4.3e-6163.04Show/hide
Query:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN
        MV+S+KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAE AARAYDQAA+LMNGQ+AKTNFP  K   +  S    S+  +PK+LSELL+ KLRK CK+
Subjt:  MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKN

Query:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCP
         +P LTCLRLD+D++HIGVWQKRAG++ + NWV  +ELG K   +  P  +  + +       + E+D++AMQMIEELLNW CP
Subjt:  PSPSLTCLRLDSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTATTCAAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATCCGCCACCCATTGCTGAAGAGAAGGGTGTGGCTGGGGACATTCGA
CACAGCAGAGGATGCAGCACGAGCGTATGATCAAGCAGCCATCTTAATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCAATCTGCAGAAGCCAGCC
ATGGGCACGGATCTTCTCCAATGACCCCAAAAGCCCTCTCAGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCCTCCTTGACATGCCTGCGGCTC
GACAGTGACAACGCCCACATCGGTGTCTGGCAGAAGCGCGCAGGCACTCGAGCCACCTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAGGAGATACCATCCCCGTT
GCCATCGCCCGAATCAACGAGCCAGGAACCCGATGGCCATCGGAACGGAATCGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCC
CTCTTCCTTCAATTTCAAGCTAA
mRNA sequenceShow/hide mRNA sequence
TCAAACACTCCATCTTCCTCACTGGGATCATAAATGGCGCTTTATGATCTAAACCTGCAAATTTTCCTCTTCCCTTTCCCCATTCCCACAAAGCTCAGGAGTGAAATTTA
ATGAAACCTTCTTTTCGGATAGCAGACAGATTAGAAGTTTTGGGGGTTCCATTTCGATCCGCCATTGGAGAGATAGAAGAAAAGTTGCAGAAATGGGAGAGAGATTTGAA
ATGAGCGGAATCTCATTAAATTTTGGTTGTTAAGAAGCTACGACTGTGGATCTTTCATGGTGAGCAGGTGAAAGATTTTAATGGCCAACCCCATTTAAAAAGTACTATTG
TTGTTGTTGTTCTTCTTCTTCTCTATCAAATAATTTTCAATTTCCACCGACAATTCTATATAAATGGCTGAAATTATTACTCTCTAGTTATGGTTTATTCAAGGAAGTTC
AGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATCCGCCACCCATTGCTGAAGAGAAGGGTGTGGCTGGGGACATTCGACACAGCAGAGGATGCAGCACG
AGCGTATGATCAAGCAGCCATCTTAATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCAATCTGCAGAAGCCAGCCATGGGCACGGATCTTCTCCAA
TGACCCCAAAAGCCCTCTCAGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCCTCCTTGACATGCCTGCGGCTCGACAGTGACAACGCCCACATC
GGTGTCTGGCAGAAGCGCGCAGGCACTCGAGCCACCTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAGGAGATACCATCCCCGTTGCCATCGCCCGAATCAACGAG
CCAGGAACCCGATGGCCATCGGAACGGAATCGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAATTTCAAGCT
AAGTACAAGATCTTCAACTCTAATAATAAGGTAACAATAGTAATAAAACCCCATAAGATCAAAACAAATAGGCTTAATTATGTATATATATATATATCTCTGTTGTGCTT
ACTGTTTATGTGACTTTGAGAAGCTCGAAATCTGTACAAAGGGAGAGCTTTTGCATTTAGATATTGTCTGTTTTGGATCGGTTTTAATCAAAATATCAAATGGGGTTTAT
GATCTTTGTAAGTCATATATATATATATATATAGAAATGAACAAAGTTTGCAGATGAAGAACGATAATTAGTGTCTTACCTATTAAATTATGGTTCGGAATCATAAATTT
AGAAGTTTTTT
Protein sequenceShow/hide protein sequence
MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSAEASHGHGSSPMTPKALSELLSTKLRKCCKNPSPSLTCLRL
DSDNAHIGVWQKRAGTRATSNWVMRIELGKKEIPSPLPSPESTSQEPDGHRNGIDEEDRIAMQMIEELLNWNCPLPSISS