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CmoCh09G004710 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G004710
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCoatomer subunit zeta
Genome locationCmo_Chr09:2114683..2117687
RNA-Seq ExpressionCmoCh09G004710
SyntenyCmoCh09G004710
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
InterPro domainsIPR039652 - Coatomer subunit zeta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466411.1 PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo]1.5e-3698.78Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
XP_022134177.1 uncharacterized protein LOC111006502 [Momordica charantia]1.5e-3698.78Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
XP_022936551.1 uncharacterized protein LOC111443125 [Cucurbita moschata]6.7e-37100Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
XP_023536268.1 uncharacterized protein LOC111797492 [Cucurbita pepo subsp. pepo]6.7e-37100Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
XP_038896955.1 TSET complex member tstD [Benincasa hispida]1.5e-3698.78Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
TrEMBL top hitse value%identityAlignment
A0A1S3CRC6 Coatomer subunit zeta7.3e-3798.78Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
A0A5D3E691 Coatomer subunit zeta7.3e-3798.78Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
A0A6J1BYX2 Coatomer subunit zeta7.3e-3798.78Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
A0A6J1F7S8 Coatomer subunit zeta3.3e-37100Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
A0A6J1IMX0 Coatomer subunit zeta3.3e-37100Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
SwissProt top hitse value%identityAlignment
C0HLF1 TSET complex member tstD1.2e-0428.92Show/hide
Query:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
        M+ ++LI N+ GNI+  +++  +  E++  +   L +   D    +KNE+  V        V+T +GD+ +++ G +E DELA
Subjt:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
Arabidopsis top hitse value%identityAlignment
AT1G15370.1 SNARE-like superfamily protein7.9e-3684.15Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA
        M+LAVL ANSVGN+L+ERF+GVPAEERLHWRSFLVKLGADNLKG KNEEL VA HKSVYIVYT+LGDV++++VGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTGGCTGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTTGAACGGTTCCATGGAGTTCCGGCAGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAACT
AGGAGCAGATAATCTCAAAGGTGCAAAAAATGAAGAGCTCTTTGTTGCTTCACACAAGTCTGTATATATTGTTTACACTGTGCTTGGCGATGTTGCAGTTTATGTTGTTG
GGAAGGACGAATATGATGAATTAGCTTAA
mRNA sequenceShow/hide mRNA sequence
CGTGGATACGCTATTATAATTCTCGAATCGGATTCCACTATATCTGTTTCCAAACGAGCCCTAATTGCGGCCTTGAGGGAAAAGGGGGGAGAAAAGGCGCGAGCGAAAAT
CTGGGATTGTTAGATTTGTTCCCAGGCTTCGAGGAGAGAGATTTTTTCCTTCAGAAATTCCGATCGAAGAGTTGAAGCAGGCGGCGAAAGATTAGGCATGTTGCTGGCTG
TGCTGATCGCCAACTCCGTCGGCAACATTCTCGTTGAACGGTTCCATGGAGTTCCGGCAGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAACTAGGAGCAGATAAT
CTCAAAGGTGCAAAAAATGAAGAGCTCTTTGTTGCTTCACACAAGTCTGTATATATTGTTTACACTGTGCTTGGCGATGTTGCAGTTTATGTTGTTGGGAAGGACGAATA
TGATGAATTAGCTTAAGTGATCTTTGTAGTAACGTCATCAATAAAGGATGCCTGTGGCAAAGCTCCAACTGAGCGCTCGTTTCTCGACAAATATGGAAAGATTTGTTTGT
GTCTTGATGAAATTGTCTGGACGAATTTATGGGGCATCCTGGAGAACACGGAGAAAGACAGGATCAAGAGGCTGATAAGGTTAAAGCCTCCCAATGAGTTTTGATTAATG
AAACGGCTG
Protein sequenceShow/hide protein sequence
MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELA