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CmoCh09G004940 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G004940
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPolyamine-modulated factor 1-binding protein
Genome locationCmo_Chr09:2270616..2279285
RNA-Seq ExpressionCmoCh09G004940
SyntenyCmoCh09G004940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024488.1 hypothetical protein SDJN02_13304 [Cucurbita argyrosperma subsp. argyrosperma]5.3e-4596.33Show/hide
Query:  MASSESKPNDQLIPLPESESLP--ESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDML
        MASSESKPNDQLIPLPESESLP  ESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDML
Subjt:  MASSESKPNDQLIPLPESESLP--ESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDML

Query:  NNGGGTLST
        NNGGGTL +
Subjt:  NNGGGTLST
XP_004136463.2 uncharacterized protein LOC101215419 [Cucumis sativus]1.4e-4093.2Show/hide
Query:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
        MA+SESKPNDQLIPLPESESLP  ESESQLS L+F ISQQAQGAMENMLRMISEIDQNAVGI+EDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGG
        GGG
Subjt:  GGG
XP_022937053.1 uncharacterized protein LOC111443468 [Cucurbita moschata]1.7e-4698.13Show/hide
Query:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
        MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGGTLST
        GGGTL +
Subjt:  GGGTLST
XP_022976221.1 uncharacterized protein LOC111476676 [Cucurbita maxima]1.6e-4495.33Show/hide
Query:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
        MASSESKP DQLIPLPESESL ESESE+QLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGGTLST
        GGGTL +
Subjt:  GGGTLST
XP_023535872.1 uncharacterized protein LOC111797169 [Cucurbita pepo subsp. pepo]1.4e-4596.26Show/hide
Query:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
        MASSESKPND LIPLPESESLPE+ESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGGTLST
        GGGTL +
Subjt:  GGGTLST
TrEMBL top hitse value%identityAlignment
A0A0A0LJE0 Uncharacterized protein6.6e-4193.2Show/hide
Query:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
        MA+SESKPNDQLIPLPESESLP  ESESQLS L+F ISQQAQGAMENMLRMISEIDQNAVGI+EDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGG
        GGG
Subjt:  GGG
A0A1S3CR82 uncharacterized protein LOC1035037842.1e-3990.57Show/hide
Query:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
        MA+SESKPNDQLIPLPE ESLP  E ESQLS L+F ISQQAQGAMENMLRMISEIDQNAVGI+EDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  -GGGTL
         GGGTL
Subjt:  -GGGTL
A0A5A7TBQ0 Uncharacterized protein2.1e-3990.57Show/hide
Query:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
        MA+SESKPNDQLIPLPE ESLP  E ESQLS L+F ISQQAQGAMENMLRMISEIDQNAVGI+EDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  -GGGTL
         GGGTL
Subjt:  -GGGTL
A0A6J1FEZ1 uncharacterized protein LOC1114434688.0e-4798.13Show/hide
Query:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
        MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGGTLST
        GGGTL +
Subjt:  GGGTLST
A0A6J1IGC1 uncharacterized protein LOC1114766767.5e-4595.33Show/hide
Query:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
        MASSESKP DQLIPLPESESL ESESE+QLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGGTLST
        GGGTL +
Subjt:  GGGTLST
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G25570.1 unknown protein2.8e-2051.46Show/hide
Query:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
        MA S S+ + QL+    +   P  +++S L+ L+F +SQQ Q  MENML+M+ EIDQN+VGI E+IEK +  A+++K +LEEEK QFQ+AAYT+LDML+N
Subjt:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGG
          G
Subjt:  GGG
AT5G25570.2 unknown protein2.8e-2051.46Show/hide
Query:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN
        MA S S+ + QL+    +   P  +++S L+ L+F +SQQ Q  MENML+M+ EIDQN+VGI E+IEK +  A+++K +LEEEK QFQ+AAYT+LDML+N
Subjt:  MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGG
          G
Subjt:  GGG
AT5G25570.3 unknown protein3.8e-1762.69Show/hide
Query:  ISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNGGG
        +SQQ Q  MENML+M+ EIDQN+VGI E+IEK +  A+++K +LEEEK QFQ+AAYT+LDML+N  G
Subjt:  ISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNGGG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCCGAATCAAAACCCAATGATCAGCTTATTCCCTTGCCGGAATCTGAGTCATTGCCAGAATCTGAATCTGAATCGCAGCTCTCAGTTCTCCTATTCCATAT
ATCACAACAGGCCCAAGGGGCTATGGAGAACATGCTTAGAATGATCAGTGAAATCGATCAAAATGCTGTTGGTATATTGGAAGACATAGAGAAGTGCAGGGGTTCTGCTC
TTGACAGGAAGGGAGTGCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACATGCTCAACAACGGAGGGGGAACGCTATCCACTATTTTTCTA
ACCTCAGTGAAGTTGATGAAAAGGATTAGATTTGATTCCAAGAGAACATGGAATGCAGATGAAAAATCACAAGATTACTTACCACTGATCCAGACACCAAAATGTAGAAA
TCTGTTGGTGGAAAGTACTCGGCTTTCATCTCAGACACCTGCACAAATATGTCTTAGGCCAACAGGAGAACTGAGAATAGCAATAAATTTAGCTCGTGAAAATTCTGTAT
ATTACCTGAAATGGAAGAGTGGAGGCTACGTCCATGGGGAACCACAGGCTTGTAAGATGGAAGAAGAAACCCAAACCAAAACATTACTTGGAATGGGCAAAATGAACATA
CCGTACAGCAATCTTCTTATGATCATCAACGAGGAGATAACCACGAAGAAGGTCAAGACAATATCAAGGGCAAAGAATGCATCCACCACCAAATCAACGGGTAAAAGAGA
CCCAGTTGCCACTTTCTTGAAGGCAAGCTCAAAGGGAGATACCCACGCTGAGTACACCACAAGCACTACCAGGAAAGTTTGCCACCACCTGCATTGCATCATCATTCATA
TTCCAAAATGCCCAACCAAAGTGGTCCGCTCCTTTCTCTCGCCAAAAGCAAAATTGCATCTACAAGTTGTTGAATTGACTCACCGATATCTTCTATCATACGGAACTATA
ATGAACTTGTTCAGGTTTGAGTATCCATCGGTCACAACAGTTCCAAACGCCGGCAAAAGGCTGCTGGAAACCGACGTCAAGTTCTTTATTTCGCCACTTGAGTGCCGCCG
GAACAGCAAAGGCAACGGCGACCTTGTTTCGGACATTGGTGTCGTCATTGTGTTTCAGCCTCTGCAAATTCTAATGACCCAGAAACAAGACGGTCACTTTTCATGCATGC
CTGAGACTTTTTATGCACACAAAAGAGGTAACTTCTACGCGAAGCCCGTGAGTTCAACTTAA
mRNA sequenceShow/hide mRNA sequence
CAGTCTCTCTGTACGATGGCAAGTTCCGAATCAAAACCCAATGATCAGCTTATTCCCTTGCCGGAATCTGAGTCATTGCCAGAATCTGAATCTGAATCGCAGCTCTCAGT
TCTCCTATTCCATATATCACAACAGGCCCAAGGGGCTATGGAGAACATGCTTAGAATGATCAGTGAAATCGATCAAAATGCTGTTGGTATATTGGAAGACATAGAGAAGT
GCAGGGGTTCTGCTCTTGACAGGAAGGGAGTGCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACATGCTCAACAACGGAGGGGGAACGCTA
TCCACTATTTTTCTAACCTCAGTGAAGTTGATGAAAAGGATTAGATTTGATTCCAAGAGAACATGGAATGCAGATGAAAAATCACAAGATTACTTACCACTGATCCAGAC
ACCAAAATGTAGAAATCTGTTGGTGGAAAGTACTCGGCTTTCATCTCAGACACCTGCACAAATATGTCTTAGGCCAACAGGAGAACTGAGAATAGCAATAAATTTAGCTC
GTGAAAATTCTGTATATTACCTGAAATGGAAGAGTGGAGGCTACGTCCATGGGGAACCACAGGCTTGTAAGATGGAAGAAGAAACCCAAACCAAAACATTACTTGGAATG
GGCAAAATGAACATACCGTACAGCAATCTTCTTATGATCATCAACGAGGAGATAACCACGAAGAAGGTCAAGACAATATCAAGGGCAAAGAATGCATCCACCACCAAATC
AACGGGTAAAAGAGACCCAGTTGCCACTTTCTTGAAGGCAAGCTCAAAGGGAGATACCCACGCTGAGTACACCACAAGCACTACCAGGAAAGTTTGCCACCACCTGCATT
GCATCATCATTCATATTCCAAAATGCCCAACCAAAGTGGTCCGCTCCTTTCTCTCGCCAAAAGCAAAATTGCATCTACAAGTTGTTGAATTGACTCACCGATATCTTCTA
TCATACGGAACTATAATGAACTTGTTCAGGTTTGAGTATCCATCGGTCACAACAGTTCCAAACGCCGGCAAAAGGCTGCTGGAAACCGACGTCAAGTTCTTTATTTCGCC
ACTTGAGTGCCGCCGGAACAGCAAAGGCAACGGCGACCTTGTTTCGGACATTGGTGTCGTCATTGTGTTTCAGCCTCTGCAAATTCTAATGACCCAGAAACAAGACGGTC
ACTTTTCATGCATGCCTGAGACTTTTTATGCACACAAAAGAGGTAACTTCTACGCGAAGCCCGTGAGTTCAACTTAA
Protein sequenceShow/hide protein sequence
MASSESKPNDQLIPLPESESLPESESESQLSVLLFHISQQAQGAMENMLRMISEIDQNAVGILEDIEKCRGSALDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTLSTIFL
TSVKLMKRIRFDSKRTWNADEKSQDYLPLIQTPKCRNLLVESTRLSSQTPAQICLRPTGELRIAINLARENSVYYLKWKSGGYVHGEPQACKMEEETQTKTLLGMGKMNI
PYSNLLMIINEEITTKKVKTISRAKNASTTKSTGKRDPVATFLKASSKGDTHAEYTTSTTRKVCHHLHCIIIHIPKCPTKVVRSFLSPKAKLHLQVVELTHRYLLSYGTI
MNLFRFEYPSVTTVPNAGKRLLETDVKFFISPLECRRNSKGNGDLVSDIGVVIVFQPLQILMTQKQDGHFSCMPETFYAHKRGNFYAKPVSST