CuGenDBv2

Gene ID	CmoCh09G005000
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF1218)
Genome location	Cmo_Chr09:2332484..2334728
RNA-Seq Expression	CmoCh09G005000
Synteny	CmoCh09G005000
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009606 - Modifying wall lignin-1/2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022937371.1 uncharacterized protein LOC111443679 [Cucurbita moschata]

2.7e-97

100

Show/hide

Query:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
        MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
Subjt:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI

Query:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA
        ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA
Subjt:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA

XP_022937374.1 uncharacterized protein LOC111443681 [Cucurbita moschata]

1.4e-93

96.3

Show/hide

Query:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
        MAVSVKIMSLT+ATLGVISFIFGVVAENKKPASGTPI GKGIVICQYPADPTV LGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
Subjt:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI

Query:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA
        ALFTTGLAITLLVWPTVTEQIHLT NVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI+ENGDS EALKN+A
Subjt:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA

XP_022976207.1 uncharacterized protein LOC111476666 [Cucurbita maxima]

1.6e-94

96.83

Show/hide

Query:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
        MAVSVKIMSLTV TLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSS+FSIFFNI
Subjt:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI

Query:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA
        ALFTTGLAITLL+WPTV EQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLV LMLAGNAREDYFDEIEENGDS EALKNNA
Subjt:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA

XP_023536367.1 uncharacterized protein LOC111797557 [Cucurbita pepo subsp. pepo]

5.6e-95

97.88

Show/hide

Query:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
        M VSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIP KGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
Subjt:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI

Query:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA
        ALFTTGLAITLLVWPTVTEQIHLTRNVH+NLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDS EALKNNA
Subjt:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA

XP_023536512.1 uncharacterized protein LOC111797667 [Cucurbita pepo subsp. pepo]

5.6e-95

97.35

Show/hide

Query:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
        MAVSVKIMSLTVATLGVISFIFGV+AENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIF NI
Subjt:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI

Query:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA
        ALFTTGLAITLLVWPTVTEQIHLT NVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDS +ALKNNA
Subjt:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EYG1 uncharacterized protein LOC111439668

6.9e-91

93.65

Show/hide

Query:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
        MA+SVKI+SLTVATLGVISFIFGVVAENKKPASGT IPGKGIV+CQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQ KSVPR A+F+S+SFSIFFNI
Subjt:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI

Query:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA
        ALFTTGLAITLLVWPTV EQIHLTRNV+HNLE ACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA
Subjt:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA

A0A6J1FA61 uncharacterized protein LOC111443679

1.3e-97

100

Show/hide

Query:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
        MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
Subjt:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI

Query:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA
        ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA
Subjt:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA

A0A6J1FGG0 uncharacterized protein LOC111443681

6.7e-94

96.3

Show/hide

Query:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
        MAVSVKIMSLT+ATLGVISFIFGVVAENKKPASGTPI GKGIVICQYPADPTV LGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
Subjt:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI

Query:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA
        ALFTTGLAITLLVWPTVTEQIHLT NVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI+ENGDS EALKN+A
Subjt:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA

A0A6J1IF65 uncharacterized protein LOC111476666

7.9e-95

96.83

Show/hide

Query:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
        MAVSVKIMSLTV TLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSS+FSIFFNI
Subjt:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI

Query:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA
        ALFTTGLAITLL+WPTV EQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLV LMLAGNAREDYFDEIEENGDS EALKNNA
Subjt:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA

A0A6J1ILG3 uncharacterized protein LOC111476667

9.0e-91

94.71

Show/hide

Query:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
        MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVIC+YPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKS PRGAMFKSSSFSIFFNI
Subjt:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI

Query:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA
        ALFTTGLAITLLVWPTVTEQIHLTRNVH NLE ACPTAKTGLLGGGAFLSLDSSLFWLVALMLA NAREDYFDEIEE G S E LKN+A
Subjt:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G31130.1 Protein of unknown function (DUF1218)

4.5e-74

76.14

Show/hide

Query:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI
        MAVS+K MSL V+ LGV+SF+ GV+AENKKPASGTPI GKG+VIC+YP+DPTVALGYLS AFLLA ++AGY SLF  Y+GKSVP   +FKS+SFS+FFNI
Subjt:  MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNI

Query:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIE
        AL T+GLA++LL+WPT+TEQ+HLTRNVH NLE +CPTAKTGLLGGGAF+SLDS LFWLVALMLA NARED+FDE+E
Subjt:  ALFTTGLAITLLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCGTGTCTGTCAAGATAATGTCTCTTACTGTCGCAACTTTAGGTGTGATATCCTTTATATTTGGAGTCGTAGCTGAGAACAAGAAGCCTGCATCTGGAACTCCCAT
CCCAGGCAAAGGCATTGTTATTTGTCAATATCCAGCGGACCCAACTGTGGCCCTGGGATATCTTTCCGTTGCGTTTCTTCTTGCTTCTTCGATCGCAGGATACTTCTCTT
TGTTCTATCCTTACCAAGGAAAATCCGTTCCTCGAGGTGCCATGTTTAAGAGCAGCAGTTTCTCTATTTTCTTCAACATTGCCCTGTTCACAACTGGATTGGCTATAACT
TTGCTTGTATGGCCTACAGTCACCGAGCAAATTCACTTGACTCGCAACGTTCATCACAATCTCGAAGCAGCATGCCCGACTGCTAAGACGGGTCTTCTGGGTGGTGGTGC
ATTTCTATCCCTTGATTCATCCCTCTTCTGGTTGGTTGCCCTGATGTTGGCTGGAAATGCTCGAGAGGACTACTTTGATGAAATAGAGGAAAACGGAGACAGCGTTGAGG
CTCTTAAGAACAACGCATGA

mRNA sequence

Show/hide mRNA sequence

ATTCGGAGTGGGAGTGGGAGCTGGAACGAAAGCGATTTTCCTGTTCTCTTCCCCATTTTTCTTCGTCGTTCAATTCTGTAGGTGACTGGTAACATTTATCTTGGGATCAA
TGGCCGTGTCTGTCAAGATAATGTCTCTTACTGTCGCAACTTTAGGTGTGATATCCTTTATATTTGGAGTCGTAGCTGAGAACAAGAAGCCTGCATCTGGAACTCCCATC
CCAGGCAAAGGCATTGTTATTTGTCAATATCCAGCGGACCCAACTGTGGCCCTGGGATATCTTTCCGTTGCGTTTCTTCTTGCTTCTTCGATCGCAGGATACTTCTCTTT
GTTCTATCCTTACCAAGGAAAATCCGTTCCTCGAGGTGCCATGTTTAAGAGCAGCAGTTTCTCTATTTTCTTCAACATTGCCCTGTTCACAACTGGATTGGCTATAACTT
TGCTTGTATGGCCTACAGTCACCGAGCAAATTCACTTGACTCGCAACGTTCATCACAATCTCGAAGCAGCATGCCCGACTGCTAAGACGGGTCTTCTGGGTGGTGGTGCA
TTTCTATCCCTTGATTCATCCCTCTTCTGGTTGGTTGCCCTGATGTTGGCTGGAAATGCTCGAGAGGACTACTTTGATGAAATAGAGGAAAACGGAGACAGCGTTGAGGC
TCTTAAGAACAACGCATGAAATTTCTTCGATCAATGAGAATAATAATTCAGTTTCACTTTACTGTTGTGATTGACTATTAAGTAAGGACTTAATTGTAAATATGATATTC
TAAGAAATGTTCATCAGTAAAATTATAGTCTAATTGTATGAGTTTTTATTTTCGCC

Protein sequence

Show/hide protein sequence

MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAIT
LLVWPTVTEQIHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSVEALKNNA

CmoCh09G005000 (gene) of Cucurbita moschata (Rifu) v1 genome