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CmoCh09G005070 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G005070
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein FAM32A-like
Genome locationCmo_Chr09:2361916..2362730
RNA-Seq ExpressionCmoCh09G005070
SyntenyCmoCh09G005070
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
InterPro domainsIPR013865 - Protein FAM32A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466328.1 PREDICTED: protein FAM32A-like [Cucumis melo]2.3e-2067.5Show/hide
Query:  TSLVDCSKENLN----------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
        TSLVDCSKE +             DMLT  ERRYLQQWEKID+QR++KMA KSHRD I EFNQ L NLSEHHDIPK+GPG
Subjt:  TSLVDCSKENLN----------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
XP_011652514.1 protein FAM32A-like [Cucumis sativus]1.5e-1968.83Show/hide
Query:  TSLVDCSKENLN-------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
        TSLVDCSKE           +DMLT  ERRYL+QWEKI++QR+AKMA KSHRD I EFNQ L NLSEHHDIPK+GPG
Subjt:  TSLVDCSKENLN-------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
XP_022152816.1 protein FAM32A-like [Momordica charantia]1.2e-2166.27Show/hide
Query:  TSLVDCSKENLN-------------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
        TSLVDCSKE++N              +D LTP ERRYLQQWEKID++R+A+MA KSHR  IHEFNQYL NLSEHHDIPK+GPG
Subjt:  TSLVDCSKENLN-------------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
XP_023536135.1 LOW QUALITY PROTEIN: protein FAM32A-like [Cucurbita pepo subsp. pepo]1.3e-2683.56Show/hide
Query:  MDATSLVDCSKENLNMNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
        M+ATSLVDCSKEN+NMNDMLTP ER YLQQ EKIDVQRIAKMA KSHRD IHEFNQYLT+L+EH++IPK+GPG
Subjt:  MDATSLVDCSKENLNMNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
XP_038897245.1 protein FAM32A-like [Benincasa hispida]7.4e-1974.63Show/hide
Query:  DCSKENLNMND-MLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
        D  K +   ND MLTP ERRYLQQWEKID+QR+A+MA KSHRD I EFNQYL NLSEHHDIPK+GPG
Subjt:  DCSKENLNMND-MLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
TrEMBL top hitse value%identityAlignment
A0A0A0LDT5 Uncharacterized protein7.2e-2068.83Show/hide
Query:  TSLVDCSKENLN-------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
        TSLVDCSKE           +DMLT  ERRYL+QWEKI++QR+AKMA KSHRD I EFNQ L NLSEHHDIPK+GPG
Subjt:  TSLVDCSKENLN-------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
A0A1S3CQZ2 protein FAM32A-like1.1e-2067.5Show/hide
Query:  TSLVDCSKENLN----------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
        TSLVDCSKE +             DMLT  ERRYLQQWEKID+QR++KMA KSHRD I EFNQ L NLSEHHDIPK+GPG
Subjt:  TSLVDCSKENLN----------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
A0A5A7TBK8 Protein FAM32A-like1.1e-2067.5Show/hide
Query:  TSLVDCSKENLN----------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
        TSLVDCSKE +             DMLT  ERRYLQQWEKID+QR++KMA KSHRD I EFNQ L NLSEHHDIPK+GPG
Subjt:  TSLVDCSKENLN----------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
A0A6J1DIW7 protein FAM32A-like5.9e-2266.27Show/hide
Query:  TSLVDCSKENLN-------------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
        TSLVDCSKE++N              +D LTP ERRYLQQWEKID++R+A+MA KSHR  IHEFNQYL NLSEHHDIPK+GPG
Subjt:  TSLVDCSKENLN-------------MNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
B9H7C0 Uncharacterized protein1.8e-1864.38Show/hide
Query:  MDATSLVDCSKENLNMNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
        M+ T   D   +    +D LTP E+RYLQQWEKID QR+ KMA KSHRD I EFNQYL NLSEH+DIPK+GPG
Subjt:  MDATSLVDCSKENLNMNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
SwissProt top hitse value%identityAlignment
A6QR31 Protein FAM32A7.4e-0639.62Show/hide
Query:  DMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKI
        D  TP +  + +  EK  ++RI K A K+H+  + +FN++L  L+EH+DIPK+
Subjt:  DMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKI
B2RYG1 Protein FAM32A7.4e-0639.62Show/hide
Query:  DMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKI
        D  TP +  + +  EK  ++RI K A K+H+  + +FN++L  L+EH+DIPK+
Subjt:  DMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKI
Q5R9E5 Protein FAM32A7.4e-0639.62Show/hide
Query:  DMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKI
        D  TP +  + +  EK  ++RI K A K+H+  + +FN++L  L+EH+DIPK+
Subjt:  DMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKI
Q9CR80 Protein FAM32A7.4e-0639.62Show/hide
Query:  DMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKI
        D  TP +  + +  EK  ++RI K A K+H+  + +FN++L  L+EH+DIPK+
Subjt:  DMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKI
Q9Y421 Protein FAM32A7.4e-0639.62Show/hide
Query:  DMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKI
        D  TP +  + +  EK  ++RI K A K+H+  + +FN++L  L+EH+DIPK+
Subjt:  DMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKI
Arabidopsis top hitse value%identityAlignment
AT1G16810.1 unknown protein8.7e-1858.73Show/hide
Query:  KENLNMNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
        ++ L+ +D LTP ERRY++Q +++DVQ++AK A KSHR+ I +FNQYL N+SEH+DIPK+GPG
Subjt:  KENLNMNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
AT1G16810.2 unknown protein8.7e-1858.73Show/hide
Query:  KENLNMNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG
        ++ L+ +D LTP ERRY++Q +++DVQ++AK A KSHR+ I +FNQYL N+SEH+DIPK+GPG
Subjt:  KENLNMNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCTACTTCATTGGTTGACTGTTCTAAAGAGAACCTGAACATGAACGATATGCTAACACCTGGGGAGAGGCGATATCTTCAGCAATGGGAGAAGATTGATGTTCA
AAGAATAGCAAAGATGGCCATAAAATCTCATCGGGATCATATTCACGAATTCAATCAATATCTTACCAATCTGAGTGAACACCATGATATTCCTAAAATCGGGCCCGGCT
AA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGAGTACGAGAACGTGGTGGTGGGGAAATTAAGGCTGAAGGGGAAGGCCTTGGGCGTAAGAGGAGATGGAATCAGGAAGAAAAAGAAGTCGAAGAAGCAGTTTAA
CAATTTTTCTCAAACTGTCAGAGAAGACGATCTCTCACCAGGTTAATCTTTTGGAAGACGAGTTCAAGAAATGGACGCTACTTCATTGGTTGACTGTTCTAAAGAGAACC
TGAACATGAACGATATGCTAACACCTGGGGAGAGGCGATATCTTCAGCAATGGGAGAAGATTGATGTTCAAAGAATAGCAAAGATGGCCATAAAATCTCATCGGGATCAT
ATTCACGAATTCAATCAATATCTTACCAATCTGAGTGAACACCATGATATTCCTAAAATCGGGCCCGGCTAA
Protein sequenceShow/hide protein sequence
MDATSLVDCSKENLNMNDMLTPGERRYLQQWEKIDVQRIAKMAIKSHRDHIHEFNQYLTNLSEHHDIPKIGPG