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CmoCh09G005100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G005100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionflowering-promoting factor 1-like protein 1
Genome locationCmo_Chr09:2372372..2372737
RNA-Seq ExpressionCmoCh09G005100
SyntenyCmoCh09G005100
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466327.1 PREDICTED: flowering-promoting factor 1-like protein 2 [Cucumis melo]1.1e-5989.15Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHN--------GGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
        MSGVWVFRSNGVMRLVEN+QAG DYSSDGHH HHHH+        GGGRKK+LVHLPSGQPV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHN--------GGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS

Query:  LPMDFSKFNSIYMYDLVVKNPNVFHVREP
        LPMDFSKFNSIYMYDLVVKNPNVFHVREP
Subjt:  LPMDFSKFNSIYMYDLVVKNPNVFHVREP

XP_022937028.1 flowering-promoting factor 1-like protein 2 [Cucurbita moschata]2.3e-65100Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
        MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF

Query:  NSIYMYDLVVKNPNVFHVREP
        NSIYMYDLVVKNPNVFHVREP
Subjt:  NSIYMYDLVVKNPNVFHVREP

XP_022976219.1 flowering-promoting factor 1-like protein 2 [Cucurbita maxima]2.3e-6298.35Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
        MSGVWVFRSNGVMRLVENAQAGGDYSSDG  HHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF

Query:  NSIYMYDLVVKNPNVFHVREP
        NSIYMYDLVVKNPNVFHVREP
Subjt:  NSIYMYDLVVKNPNVFHVREP

XP_023536365.1 flowering-promoting factor 1-like protein 2 [Cucurbita pepo subsp. pepo]5.6e-6499.18Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDG-HHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSK
        MSGVWVFRSNGVMRLVENAQAGGDYSSDG HHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSK
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDG-HHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSK

Query:  FNSIYMYDLVVKNPNVFHVREP
        FNSIYMYDLVVKNPNVFHVREP
Subjt:  FNSIYMYDLVVKNPNVFHVREP

XP_038899381.1 flowering-promoting factor 1-like protein 2 [Benincasa hispida]1.7e-6094.21Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
        MSGVWVFRSNGVMRLVEN+QAG DYSSDGHHH HH NGGGRKKILVHLPSGQ V+SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF

Query:  NSIYMYDLVVKNPNVFHVREP
        NSIYMYDLV+KNPNVFHVREP
Subjt:  NSIYMYDLVVKNPNVFHVREP

TrEMBL top hitse value%identityAlignment
A0A0A0LHE6 Uncharacterized protein5.8e-5991.06Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHN--GGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFS
        MSGVWVFRSNGVMRLVEN+QAG DYSSDGH H HHH+  GGGRKK+LVHLPSGQPV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFS
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHN--GGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFS

Query:  KFNSIYMYDLVVKNPNVFHVREP
        KFNSIYM+DLV+KNPNVFHVREP
Subjt:  KFNSIYMYDLVVKNPNVFHVREP

A0A1S3CSB1 flowering-promoting factor 1-like protein 25.3e-6089.15Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHN--------GGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
        MSGVWVFRSNGVMRLVEN+QAG DYSSDGHH HHHH+        GGGRKK+LVHLPSGQPV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHN--------GGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS

Query:  LPMDFSKFNSIYMYDLVVKNPNVFHVREP
        LPMDFSKFNSIYMYDLVVKNPNVFHVREP
Subjt:  LPMDFSKFNSIYMYDLVVKNPNVFHVREP

A0A5A7UF14 Flowering-promoting factor 1-like protein 25.3e-6089.15Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHN--------GGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
        MSGVWVFRSNGVMRLVEN+QAG DYSSDGHH HHHH+        GGGRKK+LVHLPSGQPV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHN--------GGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLIS

Query:  LPMDFSKFNSIYMYDLVVKNPNVFHVREP
        LPMDFSKFNSIYMYDLVVKNPNVFHVREP
Subjt:  LPMDFSKFNSIYMYDLVVKNPNVFHVREP

A0A6J1FEW7 flowering-promoting factor 1-like protein 21.1e-65100Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
        MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF

Query:  NSIYMYDLVVKNPNVFHVREP
        NSIYMYDLVVKNPNVFHVREP
Subjt:  NSIYMYDLVVKNPNVFHVREP

A0A6J1IMX4 flowering-promoting factor 1-like protein 21.1e-6298.35Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
        MSGVWVFRSNGVMRLVENAQAGGDYSSDG  HHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF

Query:  NSIYMYDLVVKNPNVFHVREP
        NSIYMYDLVVKNPNVFHVREP
Subjt:  NSIYMYDLVVKNPNVFHVREP

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 11.4e-3358.68Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSK
        MSGVWVF+ NGV+RLVEN    G  + +            R+K++V+LP+G+ V+SY  L++IL+ LGWERY+  GD D  QFHKRSSIDLISLP DF+K
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSK

Query:  FNSIYMYDLVVKNPNVFHVRE
        FNS+YMYD+VVKNPN FHVR+
Subjt:  FNSIYMYDLVVKNPNVFHVRE

O24340 Flowering-promoting factor 18.2e-3459.84Show/hide
Query:  MSGVWVFRSNGVMRLVENA-QAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFS
        MSGVWVF+ NGV+RLVEN  Q+GGD +S             R+K++V+LP+G+ ++SY  L++IL  LGWERY+  GD D  QFHKRSSIDLISLP DF+
Subjt:  MSGVWVFRSNGVMRLVENA-QAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFS

Query:  KFNSIYMYDLVVKNPNVFHVRE
        KF+S+YMYD+VVKNPN FHVR+
Subjt:  KFNSIYMYDLVVKNPNVFHVRE

Q5Q0B3 Flowering-promoting factor 1-like protein 12.3e-3666.13Show/hide
Query:  MSGVWVFRSNGVMRLVENA--QAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISLPMD
        MSGVWVF  NGVMRLVEN   Q+ GD SS+      +     R+KILVHLPS + V+SYG L+KIL+ LGWERYY GD      QFHKR+SIDLISLP D
Subjt:  MSGVWVFRSNGVMRLVENA--QAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISLPMD

Query:  FSKFNSIYMYDLVVKNPNVFHVRE
        FSKFNSI+MYD+VVKNPNVFHVR+
Subjt:  FSKFNSIYMYDLVVKNPNVFHVRE

Q9LGE3 Flowering-promoting factor 1-like protein 16.1e-2958.47Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
        MSGVWVF+ NGV+RLVE  QA    +            GGR+K LVH PSGQ V+SY  L+  L  LGWERYYE DP  FQFHKR S+DLISLP DFS F
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF

Query:  NSIYMYDLVVKNPNVFHV
        +S++MYD+VVKN + F V
Subjt:  NSIYMYDLVVKNPNVFHV

Q9LXB5 Flowering-promoting factor 1-like protein 21.8e-3661.67Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
        MSGVWVF +NGV+RLVEN    G  S+  H         GR+ +LV+LP+G+ V+SY  L++IL  LGWERY+ GD D  Q+HKRSSIDLISLP DFSKF
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF

Query:  NSIYMYDLVVKNPNVFHVRE
        NS+YMYD+VVKNPN FHVR+
Subjt:  NSIYMYDLVVKNPNVFHVRE

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 11.6e-3766.13Show/hide
Query:  MSGVWVFRSNGVMRLVENA--QAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISLPMD
        MSGVWVF  NGVMRLVEN   Q+ GD SS+      +     R+KILVHLPS + V+SYG L+KIL+ LGWERYY GD      QFHKR+SIDLISLP D
Subjt:  MSGVWVFRSNGVMRLVENA--QAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISLPMD

Query:  FSKFNSIYMYDLVVKNPNVFHVRE
        FSKFNSI+MYD+VVKNPNVFHVR+
Subjt:  FSKFNSIYMYDLVVKNPNVFHVRE

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)1.3e-3761.67Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF
        MSGVWVF +NGV+RLVEN    G  S+  H         GR+ +LV+LP+G+ V+SY  L++IL  LGWERY+ GD D  Q+HKRSSIDLISLP DFSKF
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKF

Query:  NSIYMYDLVVKNPNVFHVRE
        NS+YMYD+VVKNPN FHVR+
Subjt:  NSIYMYDLVVKNPNVFHVRE

AT5G24860.1 flowering promoting factor 19.9e-3558.68Show/hide
Query:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSK
        MSGVWVF+ NGV+RLVEN    G  + +            R+K++V+LP+G+ V+SY  L++IL+ LGWERY+  GD D  QFHKRSSIDLISLP DF+K
Subjt:  MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSK

Query:  FNSIYMYDLVVKNPNVFHVRE
        FNS+YMYD+VVKNPN FHVR+
Subjt:  FNSIYMYDLVVKNPNVFHVRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGCGTTTGGGTATTCCGATCCAACGGTGTGATGCGCCTCGTCGAAAACGCGCAGGCCGGCGGCGATTACTCCTCCGACGGCCACCATCACCACCACCACCACAA
CGGCGGCGGAAGAAAGAAGATTCTGGTTCATCTTCCTTCCGGCCAGCCGGTCACATCCTACGGATTTCTTCAGAAGATTCTGGAAGGTCTAGGATGGGAGCGATATTACG
AAGGCGATCCCGATTTCTTCCAATTTCATAAGCGATCTTCCATTGATCTCATTTCGCTCCCAATGGACTTCTCCAAATTCAACTCCATTTATATGTACGATCTCGTCGTC
AAGAACCCTAACGTTTTTCACGTCCGCGAGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGCGTTTGGGTATTCCGATCCAACGGTGTGATGCGCCTCGTCGAAAACGCGCAGGCCGGCGGCGATTACTCCTCCGACGGCCACCATCACCACCACCACCACAA
CGGCGGCGGAAGAAAGAAGATTCTGGTTCATCTTCCTTCCGGCCAGCCGGTCACATCCTACGGATTTCTTCAGAAGATTCTGGAAGGTCTAGGATGGGAGCGATATTACG
AAGGCGATCCCGATTTCTTCCAATTTCATAAGCGATCTTCCATTGATCTCATTTCGCTCCCAATGGACTTCTCCAAATTCAACTCCATTTATATGTACGATCTCGTCGTC
AAGAACCCTAACGTTTTTCACGTCCGCGAGCCCTAA
Protein sequenceShow/hide protein sequence
MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVV
KNPNVFHVREP