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CmoCh09G005490 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G005490
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr09:2616397..2619455
RNA-Seq ExpressionCmoCh09G005490
SyntenyCmoCh09G005490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024547.1 hypothetical protein SDJN02_13363, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-10070.86Show/hide
Query:  MSGRAESNETMMMQGLMNPSPEKNGVE-NRELQESMQSIN--------------------------ITNLVASKIEFLN--------NRTFALEFAGRKY
        MSGRAESNE MMMQGLMNPSPEKNGV  N   Q + Q  N                          +T+L   + E ++           FALEFAGRKY
Subjt:  MSGRAESNETMMMQGLMNPSPEKNGVE-NRELQESMQSIN--------------------------ITNLVASKIEFLN--------NRTFALEFAGRKY

Query:  LNHCHPRPRQLKDRVLVEVPSPTHPLFLGKKMILLKMQPTGFVAINQKLQYTHSPDPDHRFCCFRDILLIQLEIVRAIPTLLV--ESRAGGKSLGFYGST
        LNHC PRPRQLKDRVLVEV SPTHPLFLGKKMILLKMQPTGFVAI+QKLQYTHSPDPDHR CCFR ILLIQ+  + + P L    + ++     GFYGST
Subjt:  LNHCHPRPRQLKDRVLVEVPSPTHPLFLGKKMILLKMQPTGFVAINQKLQYTHSPDPDHRFCCFRDILLIQLEIVRAIPTLLV--ESRAGGKSLGFYGST

Query:  GTTSTTISCFWKVESGLKNASSTSLYQHCDESLQTLDSPDQHSSSFRLPILAVFRKTETSEEATDEEIRRSKSEGFRLIELSSRSSSPSYAGSTAPPATE
        GTTSTTISCFWKVESGLKNASSTSLYQHC+ESLQTLD PDQHSSSFRLPILAVFRKTET EEATDEEIRRSKSEGFRLIEL SRSSSPSYAGSTAPPATE
Subjt:  GTTSTTISCFWKVESGLKNASSTSLYQHCDESLQTLDSPDQHSSSFRLPILAVFRKTETSEEATDEEIRRSKSEGFRLIELSSRSSSPSYAGSTAPPATE

Query:  LS
        LS
Subjt:  LS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGAAGGGCCGAGTCTAACGAGACGATGATGATGCAAGGGCTGATGAATCCATCCCCAGAGAAGAATGGCGTCGAGAACCGTGAGCTTCAAGAGTCGATGCAGTC
CATCAACATCACTAATCTTGTTGCCAGCAAGATAGAGTTCCTTAATAATCGCACATTCGCTCTGGAGTTCGCGGGAAGAAAGTATCTGAATCATTGTCATCCCCGACCAC
GTCAATTGAAAGACAGGGTTCTAGTTGAAGTTCCTTCACCCACTCATCCACTCTTCTTAGGGAAGAAGATGATTCTGCTGAAAATGCAACCCACTGGTTTTGTGGCCATA
AACCAGAAACTCCAATACACACATTCTCCCGATCCTGATCATCGCTTTTGTTGTTTTCGGGACATTCTCCTGATCCAGCTCGAGATTGTCAGAGCAATACCCACCTTGCT
GGTTGAAAGCAGAGCTGGTGGGAAGAGCCTTGGTTTCTATGGCTCCACAGGAACAACTTCCACCACAATCTCCTGCTTCTGGAAGGTAGAATCTGGCTTGAAGAACGCTT
CTTCAACATCACTTTATCAGCACTGTGATGAGTCATTACAGACCCTGGACTCCCCGGATCAACATAGTTCCTCATTTCGTCTGCCAATTCTTGCAGTTTTTCGAAAGACT
GAGACATCGGAGGAGGCAACTGATGAGGAGATAAGGAGATCAAAGTCAGAAGGGTTCCGCTTGATCGAGTTGTCATCTCGCTCATCCTCCCCTTCATATGCTGGTTCTAC
TGCTCCTCCTGCTACAGAACTCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGGAAGGGCCGAGTCTAACGAGACGATGATGATGCAAGGGCTGATGAATCCATCCCCAGAGAAGAATGGCGTCGAGAACCGTGAGCTTCAAGAGTCGATGCAGTC
CATCAACATCACTAATCTTGTTGCCAGCAAGATAGAGTTCCTTAATAATCGCACATTCGCTCTGGAGTTCGCGGGAAGAAAGTATCTGAATCATTGTCATCCCCGACCAC
GTCAATTGAAAGACAGGGTTCTAGTTGAAGTTCCTTCACCCACTCATCCACTCTTCTTAGGGAAGAAGATGATTCTGCTGAAAATGCAACCCACTGGTTTTGTGGCCATA
AACCAGAAACTCCAATACACACATTCTCCCGATCCTGATCATCGCTTTTGTTGTTTTCGGGACATTCTCCTGATCCAGCTCGAGATTGTCAGAGCAATACCCACCTTGCT
GGTTGAAAGCAGAGCTGGTGGGAAGAGCCTTGGTTTCTATGGCTCCACAGGAACAACTTCCACCACAATCTCCTGCTTCTGGAAGGTAGAATCTGGCTTGAAGAACGCTT
CTTCAACATCACTTTATCAGCACTGTGATGAGTCATTACAGACCCTGGACTCCCCGGATCAACATAGTTCCTCATTTCGTCTGCCAATTCTTGCAGTTTTTCGAAAGACT
GAGACATCGGAGGAGGCAACTGATGAGGAGATAAGGAGATCAAAGTCAGAAGGGTTCCGCTTGATCGAGTTGTCATCTCGCTCATCCTCCCCTTCATATGCTGGTTCTAC
TGCTCCTCCTGCTACAGAACTCTCATGA
Protein sequenceShow/hide protein sequence
MSGRAESNETMMMQGLMNPSPEKNGVENRELQESMQSINITNLVASKIEFLNNRTFALEFAGRKYLNHCHPRPRQLKDRVLVEVPSPTHPLFLGKKMILLKMQPTGFVAI
NQKLQYTHSPDPDHRFCCFRDILLIQLEIVRAIPTLLVESRAGGKSLGFYGSTGTTSTTISCFWKVESGLKNASSTSLYQHCDESLQTLDSPDQHSSSFRLPILAVFRKT
ETSEEATDEEIRRSKSEGFRLIELSSRSSSPSYAGSTAPPATELS