; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G005590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G005590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpre-rRNA-processing protein TSR2 homolog
Genome locationCmo_Chr09:2673346..2679921
RNA-Seq ExpressionCmoCh09G005590
SyntenyCmoCh09G005590
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR019398 - Pre-rRNA-processing protein TSR2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591676.1 Pre-rRNA-processing protein TSR2-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.7e-16282.81Show/hide
Query:  MANFHRSKSDYDDRRRCKRHPKHHQSPGVCSLCLAEKLSQIVSTKSSRKVSDSLSSSCSTSYYSSASSCSSCSSPNPPYGYNTDRRKAFVFSASSIFKKS
        MANFHRSKSDYDDRRRCKRHPKHHQSPGVCSLCLAEKLSQIVSTKSSRKVSDSLSSSCSTSYYSSASSCSSCSSPNPPYGYNTDRRKAFVFSASSIFKKS
Subjt:  MANFHRSKSDYDDRRRCKRHPKHHQSPGVCSLCLAEKLSQIVSTKSSRKVSDSLSSSCSTSYYSSASSCSSCSSPNPPYGYNTDRRKAFVFSASSIFKKS

Query:  RSMAFAPRLRRGTESDSGKNNNLGFWSKILRRPRRKIMEFEEGRAHIFSVVKPSESQSQLSFDRSSPSISFSALSCFKGSTFGGGEMEGGENRLLPAGAL
        RSMAFAPRLRRGTESDSGKNNNLG  S I  RP     +F    + +  V++    + +++                             +NRLLPAGAL
Subjt:  RSMAFAPRLRRGTESDSGKNNNLGFWSKILRRPRRKIMEFEEGRAHIFSVVKPSESQSQLSFDRSSPSISFSALSCFKGSTFGGGEMEGGENRLLPAGAL

Query:  PLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIVMHEECLDGNFSSIE
        PLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIVMHEECLDGNFSSIE
Subjt:  PLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIVMHEECLDGNFSSIE

Query:  KLRQSPLPRVARSHVSQVMSDDDE---EEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN
        KLRQSPLPRVARSHVSQVMSDDDE   EEDEEEGGDVVV NGRRDMMVDAIQ TPVNQPTPEATAEAEDGWVQVTSRRSRGTRN
Subjt:  KLRQSPLPRVARSHVSQVMSDDDE---EEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN

KAG7024555.1 Pre-rRNA-processing protein TSR2-like protein [Cucurbita argyrosperma subsp. argyrosperma]1.5e-9997.47Show/hide
Query:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
        MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
Subjt:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDE---EEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN
        MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDE   EEDEEEGGDVVV NGRRDMMVDAIQ TPVNQPTPEATAEAEDGWVQVTSRRSRGTRN
Subjt:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDE---EEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN

XP_022936382.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita moschata]3.0e-103100Show/hide
Query:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
        MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
Subjt:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN
        MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN
Subjt:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN

XP_022975934.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita maxima]1.1e-9796.92Show/hide
Query:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
        MEGGENRLLPA ALP FQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
Subjt:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN
        MHEECLDGNFSSIEKLRQSPLP+VARSHVSQVMS DDEEEDEEEGGDV VGNGRRDMMVDAIQP PVNQPTPEATAEAEDGWVQVTSRRSRGTRN
Subjt:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN

XP_023534881.1 pre-rRNA-processing protein TSR2 homolog isoform X1 [Cucurbita pepo subsp. pepo]1.6e-10198.46Show/hide
Query:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
        MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
Subjt:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN
        MHEECLDGNFSSIEKLRQSPLP+VARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDA QP PVNQPTPEATAEAEDGWVQVTSRRSRGTRN
Subjt:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN

TrEMBL top hitse value%identityAlignment
A0A5D3E598 Pre-rRNA-processing protein TSR25.1e-7779.9Show/hide
Query:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
        MEGG NRLLPA A PLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDI TWF QNKE LYIDDLE ILDEA+LSLNTQVDDGSIEEVAERLI 
Subjt:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPT---PVN-QPTPEATAEAEDGWVQVTSRRSRGTRN
        MHEEC+D NFSSIE+LRQSP P+VA +HV+Q  SDDD+++D EE  DV     R DMMVDA+QP    PVN Q  PEATAEAEDGWVQVTSRR+RGTRN
Subjt:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPT---PVN-QPTPEATAEAEDGWVQVTSRRSRGTRN

A0A6J1F8A7 pre-rRNA-processing protein TSR2 homolog1.4e-103100Show/hide
Query:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
        MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
Subjt:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN
        MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN
Subjt:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN

A0A6J1FPH6 pre-rRNA-processing protein TSR2 homolog1.0e-7779.51Show/hide
Query:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
        M+G  NRLLPA A PLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDI TWFTQNKE LYIDDLEMILDE +LSLNTQVDDGSIEEVAE+LI 
Subjt:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNG----RRDMMVDAI----QPTPVNQP-TPEATAEAEDGWVQVTSRR-S
        MHEEC+DGNFSSIE+LRQSPLPR A SHVSQ MSDD+EEE+E++  D   GNG    R DMMVDAI    QP  VNQP  PEA+A AEDGWVQVTSRR S
Subjt:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNG----RRDMMVDAI----QPTPVNQP-TPEATAEAEDGWVQVTSRR-S

Query:  RGTRN
        RGTRN
Subjt:  RGTRN

A0A6J1IM14 pre-rRNA-processing protein TSR2 homolog5.3e-9896.92Show/hide
Query:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
        MEGGENRLLPA ALP FQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
Subjt:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN
        MHEECLDGNFSSIEKLRQSPLP+VARSHVSQVMS DDEEEDEEEGGDV VGNGRRDMMVDAIQP PVNQPTPEATAEAEDGWVQVTSRRSRGTRN
Subjt:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN

A0A6J1J400 pre-rRNA-processing protein TSR2 homolog6.1e-7880.39Show/hide
Query:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV
        MEGG NRLLPA A PLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDI TWFTQNKE LYIDDLEMILDE +LSLNTQVDDGSIEEVAE+LI 
Subjt:  MEGGENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIV

Query:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDE-EEGGDVVVGNG----RRDMMVDAI--QPTPVN-QPTPEATAEAEDGWVQVTSRR-SR
        MHEEC+DGNFSSI +LRQSPLPR A SHVSQ MSD++EEE+E ++  D  VGNG    R DMMVDAI  QP  VN QP PEA+A AEDGWVQVTSRR SR
Subjt:  MHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDE-EEGGDVVVGNG----RRDMMVDAI--QPTPVN-QPTPEATAEAEDGWVQVTSRR-SR

Query:  GTRN
        GTRN
Subjt:  GTRN

SwissProt top hitse value%identityAlignment
Q06672 Pre-rRNA-processing protein TSR21.5e-0929.12Show/hide
Query:  FQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSL----NTQVDDGSIEEVAERLIVMHEECLDGNFSS
        F+ G+ +V+ +W AL +AVEN WGG DS  K + +   ++  F   K    + D  +I +  L ++     T V+D S   +A  +I ++ +C + N++ 
Subjt:  FQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSL----NTQVDDGSIEEVAERLIVMHEECLDGNFSS

Query:  IEKLR---QSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGW--VQVTSRR
        +EKL    Q          V  +  DDDE++++ E  D    +   D  +D + P  V+   PE   + EDG+  VQ   RR
Subjt:  IEKLR---QSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGW--VQVTSRR

Q3KPN2 Pre-rRNA-processing protein TSR2 homolog4.7e-1131.15Show/hide
Query:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIVMHEECLDGNFSSIE-
        LF+E    VL  W  LQ+AVEN +GG  S+ K E +   I  +F+ N +    +  + I+       +T V+DGS   VA++L V+  +C  G  ++++ 
Subjt:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIVMHEECLDGNFSSIE-

Query:  KLRQSPLPRV-ARSHVSQVMSDDDEEE---DEEEGGDV--VVGNGRRDMMVDAIQPT--PVNQPTPEATAEAEDGWVQVTSRR
        K+ Q    +   R+ V +V   DDEEE   DEEE  D     G+     +  A+ P+  P  +  PE     +DGW  V  ++
Subjt:  KLRQSPLPRV-ARSHVSQVMSDDDEEE---DEEEGGDV--VVGNGRRDMMVDAIQPT--PVNQPTPEATAEAEDGWVQVTSRR

Q3KRG3 Pre-rRNA-processing protein TSR2 homolog2.5e-1229.03Show/hide
Query:  LPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLS-LNTQVDDGSIEEVAERLIVMHEECLD
        L +    +F E +  VL  W  LQ+AV+N +GG  S++K E +   +  +FT N + L  D++E  + E + +  +T VDDGS+ +VA+++  M ++C  
Subjt:  LPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLS-LNTQVDDGSIEEVAERLIVMHEECLD

Query:  GNFSSIE----KLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRR
        G  + +     KL Q                 DD+++DEEE  D   G+        ++  T VN    E   E +DGW  V  ++
Subjt:  GNFSSIE----KLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRR

Q3T090 Pre-rRNA-processing protein TSR2 homolog2.2e-0827.07Show/hide
Query:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLS-LNTQVDDGSIEEVAERLIVMHEECLDGNFSSIE
        LF   +   L  W ALQ+AVEN +GG  S+ K E L   +  +F +N + L +D++E  L E +++  +T V+DGS+ +V+++L  M      G+ ++++
Subjt:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLS-LNTQVDDGSIEEVAERLIVMHEECLDGNFSSIE

Query:  KLRQSPLPR--VARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTP-VNQPTPEATAE---AEDGWVQVTSRR
        ++      R    R+       + DE++D     ++ V         D + P P  + P  +   E    EDGW  V  ++
Subjt:  KLRQSPLPR--VARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTP-VNQPTPEATAE---AEDGWVQVTSRR

Q969E8 Pre-rRNA-processing protein TSR2 homolog1.5e-0927.57Show/hide
Query:  ALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLS-LNTQVDDGSIEEVAERLIVMHEECLDGNFS
        A  LF+ G+   L  W ALQ+AVEN +GG  S+ K + L   +  +F +N + L +D++E  L E L +  +T V+DGS+ +V+++L  M      G+ +
Subjt:  ALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLS-LNTQVDDGSIEEVAERLIVMHEECLDGNFS

Query:  SIEKLRQSPLPR---VARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTP-VNQPTPEATAE---AEDGWVQVTSRR
        ++ ++      R   V  + +      D++E+D +   ++ V         D + P P  + P  +   E    EDGW  V  ++
Subjt:  SIEKLRQSPLPR---VARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTP-VNQPTPEATAE---AEDGWVQVTSRR

Arabidopsis top hitse value%identityAlignment
AT1G22470.1 unknown protein1.2e-0640.37Show/hide
Query:  RSKSDYDDRRRCKRHPKHHQSPGVCSLCLAEKLSQIVSTKSSRKVSDSLSSSCSTSYYSSASSCSSCSSPNPPYGYNTDRRKAFVFSASSIFKKSRSMAF
        RS S  D    CK+HPKH QSPG+CSLCL E LS     K S +  D  SS  S+S   + SSCSS SS         +    F  +A S +  S S   
Subjt:  RSKSDYDDRRRCKRHPKHHQSPGVCSLCLAEKLSQIVSTKSSRKVSDSLSSSCSTSYYSSASSCSSCSSPNPPYGYNTDRRKAFVFSASSIFKKSRSMAF

Query:  APRLRRGTE
        +P   R +E
Subjt:  APRLRRGTE

AT1G35210.1 unknown protein5.0e-0838.66Show/hide
Query:  CKRHPKHHQSPGVCSLCLAEKLSQIVSTKSSRK-----VSDSLSSSCSTSYYSSASSCSSCSSPNPPYGYNTDRRKAFVFSAS--------SIFKKSRSM
        CK+HPKH QSPGVCSLCL E+LS  +   SSR+     +  + SS+ S+     +SS SSC SP        DRR+  + S          S   KSRS+
Subjt:  CKRHPKHHQSPGVCSLCLAEKLSQIVSTKSSRK-----VSDSLSSSCSTSYYSSASSCSSCSSPNPPYGYNTDRRKAFVFSAS--------SIFKKSRSM

Query:  AF----APRLRRGTESDSG
        A+      R ++ T+++SG
Subjt:  AF----APRLRRGTESDSG

AT1G72240.1 unknown protein1.6e-0648.1Show/hide
Query:  SKSDYDDRRRCKRHPKHHQSPGVCSLCLAEKLSQIV-----STKSSRKV-----SDSLSSSCSTSYYSSASSCSSCSSP
        S S+ D+   CK+H KH QSPG+CSLCL E+LS++       TK + +      S S SSS S S   S+SS SSCSSP
Subjt:  SKSDYDDRRRCKRHPKHHQSPGVCSLCLAEKLSQIV-----STKSSRKV-----SDSLSSSCSTSYYSSASSCSSCSSP

AT3G22510.1 Pre-rRNA-processing protein TSR2, conserved region4.5e-1745.74Show/hide
Query:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEA-LLSLNTQVDDGSIEEVAERLIVMHEECLDG
        + Q  IG +LSRW  LQ+AV+N+WGG DS +K + L  ++    +Q+   + ++++E +L E+ LLS NT+++DGSIEEVAE+L+++HEE L G
Subjt:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEA-LLSLNTQVDDGSIEEVAERLIVMHEECLDG

AT5G27990.1 Pre-rRNA-processing protein TSR2, conserved region3.6e-3039.58Show/hide
Query:  ENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLY-IDDLEMILDEALLSLNTQVDDGSIEEVAERLIVMHE
        +N  L   A  + +EGIGL+L RW+A++ AVEN WGGRDS+ K     + +  +F Q+K+P+  I+ L  +LD+ L  LNT  +DGS++EVA  L+ ++E
Subjt:  ENRLLPAGALPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDILTWFTQNKEPLY-IDDLEMILDEALLSLNTQVDDGSIEEVAERLIVMHE

Query:  ECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN
        +C +GN+  +E+LR +     A   V +V + DDEE D+E+           DMMVDA        P  E    A+DGW  V+SR+++G RN
Subjt:  ECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEEGGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACTTTCACAGATCCAAATCCGACTACGACGATCGCCGCCGCTGCAAACGGCATCCGAAGCACCACCAATCTCCCGGCGTTTGCTCGCTCTGTTTGGCCGAAAA
GCTCTCGCAAATCGTCTCCACGAAATCGTCACGTAAAGTCTCCGATTCTCTTTCTTCTTCCTGTTCCACATCTTATTACTCCTCTGCTTCCTCTTGTTCTTCCTGTTCTT
CGCCGAATCCTCCTTACGGTTACAATACGGATCGCCGTAAGGCTTTCGTGTTTTCGGCGTCTTCGATCTTTAAAAAGAGTAGATCGATGGCGTTCGCGCCGAGATTGAGA
CGAGGAACAGAGAGCGATAGTGGAAAGAATAATAACCTAGGGTTTTGGTCGAAGATTCTTAGACGGCCGAGACGGAAGATAATGGAATTTGAAGAGGGCCGAGCTCATAT
CTTCTCGGTTGTGAAGCCCTCTGAATCGCAATCGCAGCTCTCTTTCGATCGATCATCGCCCTCAATTTCATTCAGCGCTCTCAGCTGTTTCAAGGGTTCTACGTTTGGAG
GCGGAGAGATGGAAGGTGGCGAAAACCGCCTTCTCCCAGCTGGTGCTTTGCCATTGTTCCAGGAAGGCATCGGGTTGGTTTTATCTCGTTGGTCAGCTCTTCAATTGGCA
GTGGAAAACGAGTGGGGCGGTCGGGACTCTCGTCGTAAAGTCGAACTATTATGCTCCGACATTCTCACATGGTTTACTCAGAACAAAGAGCCACTATATATTGATGATTT
AGAAATGATTCTTGATGAAGCTTTGCTTTCGTTGAATACTCAGGTTGATGATGGTAGCATTGAGGAGGTAGCTGAAAGATTGATTGTCATGCATGAGGAATGTCTGGATG
GTAACTTTAGCTCTATCGAGAAGTTAAGGCAATCCCCTCTTCCTCGAGTTGCTCGTTCTCACGTTAGTCAGGTTATGAGCGATGATGATGAAGAAGAAGATGAAGAAGAG
GGTGGTGATGTTGTTGTTGGAAATGGAAGGAGGGATATGATGGTGGATGCCATACAACCCACGCCTGTCAATCAGCCCACTCCAGAGGCCACAGCTGAAGCCGAAGATGG
ATGGGTGCAAGTCACATCAAGAAGAAGTAGGGGTACAAGAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAACTTTCACAGATCCAAATCCGACTACGACGATCGCCGCCGCTGCAAACGGCATCCGAAGCACCACCAATCTCCCGGCGTTTGCTCGCTCTGTTTGGCCGAAAA
GCTCTCGCAAATCGTCTCCACGAAATCGTCACGTAAAGTCTCCGATTCTCTTTCTTCTTCCTGTTCCACATCTTATTACTCCTCTGCTTCCTCTTGTTCTTCCTGTTCTT
CGCCGAATCCTCCTTACGGTTACAATACGGATCGCCGTAAGGCTTTCGTGTTTTCGGCGTCTTCGATCTTTAAAAAGAGTAGATCGATGGCGTTCGCGCCGAGATTGAGA
CGAGGAACAGAGAGCGATAGTGGAAAGAATAATAACCTAGGGTTTTGGTCGAAGATTCTTAGACGGCCGAGACGGAAGATAATGGAATTTGAAGAGGGCCGAGCTCATAT
CTTCTCGGTTGTGAAGCCCTCTGAATCGCAATCGCAGCTCTCTTTCGATCGATCATCGCCCTCAATTTCATTCAGCGCTCTCAGCTGTTTCAAGGGTTCTACGTTTGGAG
GCGGAGAGATGGAAGGTGGCGAAAACCGCCTTCTCCCAGCTGGTGCTTTGCCATTGTTCCAGGAAGGCATCGGGTTGGTTTTATCTCGTTGGTCAGCTCTTCAATTGGCA
GTGGAAAACGAGTGGGGCGGTCGGGACTCTCGTCGTAAAGTCGAACTATTATGCTCCGACATTCTCACATGGTTTACTCAGAACAAAGAGCCACTATATATTGATGATTT
AGAAATGATTCTTGATGAAGCTTTGCTTTCGTTGAATACTCAGGTTGATGATGGTAGCATTGAGGAGGTAGCTGAAAGATTGATTGTCATGCATGAGGAATGTCTGGATG
GTAACTTTAGCTCTATCGAGAAGTTAAGGCAATCCCCTCTTCCTCGAGTTGCTCGTTCTCACGTTAGTCAGGTTATGAGCGATGATGATGAAGAAGAAGATGAAGAAGAG
GGTGGTGATGTTGTTGTTGGAAATGGAAGGAGGGATATGATGGTGGATGCCATACAACCCACGCCTGTCAATCAGCCCACTCCAGAGGCCACAGCTGAAGCCGAAGATGG
ATGGGTGCAAGTCACATCAAGAAGAAGTAGGGGTACAAGAAATTAGTAAGAACCCTACTTTTAATTATCTATCTCAACTTAATTCATTTACCCTTTTTCTTTGCACTGGG
CACTAGCCATCAATTTTGTTTCGTCCCAAAATAGACAAAATGTTGGAATTCAGCTTGTGGGAGAACTCACTTAGGGATGGTATGCCATTGCTTTCTTTAAGTATCATATT
TATCCCCCATGCCTTCTGGTTACTCCATTATATACAATAGGTATGGTCGTAAGATGGAGTTTGCCTTTTGAACACCCGTATCTAAACATATATATCTCAACTAGTTGAGC
TATACTTAATTTGGTTTGTGATAGATATACACGAAGAACACCATATGATTAGAGGATGT
Protein sequenceShow/hide protein sequence
MANFHRSKSDYDDRRRCKRHPKHHQSPGVCSLCLAEKLSQIVSTKSSRKVSDSLSSSCSTSYYSSASSCSSCSSPNPPYGYNTDRRKAFVFSASSIFKKSRSMAFAPRLR
RGTESDSGKNNNLGFWSKILRRPRRKIMEFEEGRAHIFSVVKPSESQSQLSFDRSSPSISFSALSCFKGSTFGGGEMEGGENRLLPAGALPLFQEGIGLVLSRWSALQLA
VENEWGGRDSRRKVELLCSDILTWFTQNKEPLYIDDLEMILDEALLSLNTQVDDGSIEEVAERLIVMHEECLDGNFSSIEKLRQSPLPRVARSHVSQVMSDDDEEEDEEE
GGDVVVGNGRRDMMVDAIQPTPVNQPTPEATAEAEDGWVQVTSRRSRGTRN