; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G006060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G006060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein, putative
Genome locationCmo_Chr09:3014332..3017231
RNA-Seq ExpressionCmoCh09G006060
SyntenyCmoCh09G006060
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591724.1 hypothetical protein SDJN03_14070, partial [Cucurbita argyrosperma subsp. sororia]8.6e-10293.66Show/hide
Query:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
        MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVD K LNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
Subjt:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL

Query:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH
        LDTEKLIFK E +     QVDTHVLVSVISEGVVAL +ARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFI+PSFLPSWLLRTNQTQGPGNHH
Subjt:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH

Query:  ASKSS
        ASKSS
Subjt:  ASKSS

KAG7024606.1 hypothetical protein SDJN02_13424 [Cucurbita argyrosperma subsp. argyrosperma]8.6e-10293.66Show/hide
Query:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
        MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVD K LNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
Subjt:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL

Query:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH
        LDTEKLIFK E +     QVDTHVLVSVISEGVVAL +ARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFI+PSFLPSWLLRTNQTQGPGNHH
Subjt:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH

Query:  ASKSS
        ASKSS
Subjt:  ASKSS

XP_022936341.1 uncharacterized protein LOC111442991 [Cucurbita moschata]4.9e-10596.59Show/hide
Query:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
        MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
Subjt:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL

Query:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH
        LDTEKLIFKAE +     QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH
Subjt:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH

Query:  ASKSS
        ASKSS
Subjt:  ASKSS

XP_022975678.1 uncharacterized protein LOC111475555 [Cucurbita maxima]2.5e-10193.66Show/hide
Query:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
        MRHSLERF FVLFHVLVIIMKWPSFCLSSMVDSK LNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
Subjt:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL

Query:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH
        LDTEKLIFK E +     QVDTHVLVSVISEGVVAL++ARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFI+PSFLPSWLLRTNQTQGPGNHH
Subjt:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH

Query:  ASKSS
        ASKSS
Subjt:  ASKSS

XP_023534968.1 uncharacterized protein LOC111796539 [Cucurbita pepo subsp. pepo]1.0e-9993.17Show/hide
Query:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
        M HSLERF FVLFHVLVIIMKWPSFCLSSMVDSK LNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
Subjt:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL

Query:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH
        LDTEKLIFKAE +     QVDTHVLVSVISEGVVAL +ARERDSIIFNIVCDELLIGIP EAWGVGGLVIICLILAFI+PSFLPSWLLRTNQTQGPGNHH
Subjt:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH

Query:  ASKSS
        ASKSS
Subjt:  ASKSS

TrEMBL top hitse value%identityAlignment
A0A0A0LEU4 Uncharacterized protein3.1e-8982.44Show/hide
Query:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
        M HSLE F FVL HVLVIIMKWP+FCLSSMV+SK LNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGS+PASFSLELKRDLTSPV+K+SRKL
Subjt:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL

Query:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH
        LDTEKLIFK E +K    QVD HVLV+V SEGVVA+ + RE +SI++NIVCDELLIGIPH+AWGVGGLVI CLILAFI+PS LP WLL+TNQTQGPGN H
Subjt:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH

Query:  ASKSS
        ASK+S
Subjt:  ASKSS

A0A1S3CRU2 uncharacterized protein LOC103503615 isoform X16.2e-9083.41Show/hide
Query:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
        M HSLE F FVLFHVLVIIMKWP FCLSSMV+SK LNVGEELWRETLPLQMGSRLY LQGLKPD WYEVKISYPGS+PASFSLELKRDLTSPV+K+SRKL
Subjt:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL

Query:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH
        LDTEKLIFK E +K    QVD HVLV+V SEGVVA+ + RER+SI+FNIVCDELLIGIPH+AWGVGGLVI CLILAFI+PS LP WLL+TNQTQGPGNHH
Subjt:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH

Query:  ASKSS
        ASK+S
Subjt:  ASKSS

A0A5D3E5W6 Putative transmembrane protein6.2e-8283.33Show/hide
Query:  MKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKLLDTEKLIFKAEILK----Q
        MKWP FCLSSMV+SK LNVGEELWRETLPLQMGSRLY LQGLKPD WYEVKISYPGS+PASFSLELKRDLTSPV+K+SRKLLDTEKLIFK E +K    Q
Subjt:  MKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKLLDTEKLIFKAEILK----Q

Query:  VDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHHASKSS
        VD HVLV+V SEGVVA+ + RER+SI+FNIVCDELLIGIPH+AWGVGGLVI CLILAFI+PS LP WLL+TNQTQGPGNHHASK+S
Subjt:  VDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHHASKSS

A0A6J1F779 uncharacterized protein LOC1114429912.4e-10596.59Show/hide
Query:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
        MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
Subjt:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL

Query:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH
        LDTEKLIFKAE +     QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH
Subjt:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH

Query:  ASKSS
        ASKSS
Subjt:  ASKSS

A0A6J1IJY5 uncharacterized protein LOC1114755551.2e-10193.66Show/hide
Query:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
        MRHSLERF FVLFHVLVIIMKWPSFCLSSMVDSK LNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL
Subjt:  MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKL

Query:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH
        LDTEKLIFK E +     QVDTHVLVSVISEGVVAL++ARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFI+PSFLPSWLLRTNQTQGPGNHH
Subjt:  LDTEKLIFKAEILK----QVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHH

Query:  ASKSS
        ASKSS
Subjt:  ASKSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20890.1 unknown protein7.4e-4351.11Show/hide
Query:  FVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLE-LKRDLTSPVDKKSRKLLDTEKLIF
        ++L  ++V I     +    +   K L  G+ELW+ETLPL+ GSR+Y LQGLK + WYEVKISYP S+PA FSL+ LK  +        R+LL+TEKLIF
Subjt:  FVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLE-LKRDLTSPVDKKSRKLLDTEKLIF

Query:  KAEILKQVDT----HVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLL
        K E +++VD     +VLV+V  EG+VA+   +ER SII+NIVC+E L+GIPH +W V  LV++CL++A ILP FLPS+LL
Subjt:  KAEILKQVDT----HVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLL

AT1G76480.1 unknown protein2.3e-2047.86Show/hide
Query:  MPASFSLELKRDLTSPVD-KKSRKLLDTEKLIFKAEILKQVDT----HVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLIL
        +PA  SL+L ++    +   + R+LL+TEKLIFKAE LK+V+     +VLV++  EG+VA+  +RER  II+NIVC+E L+GIP+ +W V  LV +CL++
Subjt:  MPASFSLELKRDLTSPVD-KKSRKLLDTEKLIFKAEILKQVDT----HVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLIL

Query:  AFILPSFLPSWLLRTNQ
        +FI+P  LPS LL  +Q
Subjt:  AFILPSFLPSWLLRTNQ

AT1G76480.2 unknown protein5.1e-4451.63Show/hide
Query:  FVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVD-KKSRKLLDTEKLIF
        ++L  ++V++   P  C  +M D K L VG+ELWRETLPLQ GSR+Y LQGLK + WYEVKISYP S+PA  SL+L ++    +   + R+LL+TEKLIF
Subjt:  FVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVD-KKSRKLLDTEKLIF

Query:  KAEILKQVDT----HVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQ
        KAE LK+V+     +VLV++  EG+VA+  +RER  II+NIVC+E L+GIP+ +W V  LV +CL+++FI+P  LPS LL  +Q
Subjt:  KAEILKQVDT----HVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCATTCACTCGAGCGATTTCCATTTGTTCTTTTTCACGTTCTTGTCATCATTATGAAATGGCCGAGTTTCTGCCTGAGTAGTATGGTCGACAGTAAAAATTTGAA
TGTTGGAGAGGAGCTGTGGAGGGAAACATTACCATTACAAATGGGTTCTCGCCTGTATCATCTTCAAGGACTTAAACCTGATATGTGGTATGAAGTGAAGATATCATACC
CGGGCTCTATGCCTGCCAGCTTCTCGTTAGAACTGAAGAGAGACTTGACAAGCCCTGTTGATAAGAAGAGCAGAAAACTACTCGACACTGAAAAGCTTATTTTTAAGGCC
GAAATTCTGAAACAGGTTGATACTCATGTATTGGTCTCTGTGATATCCGAGGGAGTTGTTGCCTTATCGACCGCCCGGGAAAGGGATTCGATCATCTTCAATATAGTCTG
TGACGAACTACTCATCGGCATCCCGCACGAAGCTTGGGGGGTTGGAGGGTTGGTTATAATCTGCTTGATATTGGCATTCATACTCCCATCTTTTCTACCCTCATGGCTAC
TACGGACCAACCAAACCCAAGGACCGGGAAACCATCATGCATCCAAGAGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
TGCCAAATTTTTGTTATTTTATATTAGAAATTTCAAATTTATATTTTTTTTTTATTAAATTACTTAAAATTTTAATTTAATTTTTATATCTCAAATTTTCAACCATCGGA
GCCCTAATTTTCAGTATCTGCGTCAGCACTCTCGGTCGATACTCACCGCCCGCTCACCGTCGTCTCTCAGCGCCTCAGGCTCGCAGCTTTCGTTCCCTCGTCTGGATTTT
TCCCGTTCTCCTCTTCAAACAAAAATTTGTACTGTGGCAGCTTAGGGAACAAATGCGTCATTCACTCGAGCGATTTCCATTTGTTCTTTTTCACGTTCTTGTCATCATTA
TGAAATGGCCGAGTTTCTGCCTGAGTAGTATGGTCGACAGTAAAAATTTGAATGTTGGAGAGGAGCTGTGGAGGGAAACATTACCATTACAAATGGGTTCTCGCCTGTAT
CATCTTCAAGGACTTAAACCTGATATGTGGTATGAAGTGAAGATATCATACCCGGGCTCTATGCCTGCCAGCTTCTCGTTAGAACTGAAGAGAGACTTGACAAGCCCTGT
TGATAAGAAGAGCAGAAAACTACTCGACACTGAAAAGCTTATTTTTAAGGCCGAAATTCTGAAACAGGTTGATACTCATGTATTGGTCTCTGTGATATCCGAGGGAGTTG
TTGCCTTATCGACCGCCCGGGAAAGGGATTCGATCATCTTCAATATAGTCTGTGACGAACTACTCATCGGCATCCCGCACGAAGCTTGGGGGGTTGGAGGGTTGGTTATA
ATCTGCTTGATATTGGCATTCATACTCCCATCTTTTCTACCCTCATGGCTACTACGGACCAACCAAACCCAAGGACCGGGAAACCATCATGCATCCAAGAGTTCTTAAGT
AATTCCAATGTTCTAAGGATGGAGCTCAGTTATTGTAGAGTGCCAAGCTGCGTGCCTTCCTGCCTGCCCTTATCTCACAAGGATTTCCTCATCACGTCGTGAGAAGGAAA
AGGAAAATATGCAAGCTTTTGGTTCCCTTTTGTTCCCTTTTGTTCCCTTTTGAAATTTAAAATTCATGTCGACCCGTTGTTATAACAATTTATTGATTTTTATGTTCTAC
GTTGTCAAGTTGCGATTTTCACGAGCCTCATTTCTTTCCGTAGAAATGGGTTGTAAAGGGTATTTTAGTAGCAAGTCCTAGATTAATATCATGACTTCGACAAATTCTTA
TAATACAG
Protein sequenceShow/hide protein sequence
MRHSLERFPFVLFHVLVIIMKWPSFCLSSMVDSKNLNVGEELWRETLPLQMGSRLYHLQGLKPDMWYEVKISYPGSMPASFSLELKRDLTSPVDKKSRKLLDTEKLIFKA
EILKQVDTHVLVSVISEGVVALSTARERDSIIFNIVCDELLIGIPHEAWGVGGLVIICLILAFILPSFLPSWLLRTNQTQGPGNHHASKSS