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CmoCh09G006500 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G006500
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr09:3248034..3248754
RNA-Seq ExpressionCmoCh09G006500
SyntenyCmoCh09G006500
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022975986.1 uncharacterized protein LOC111476524 [Cucurbita maxima]6.1e-5490.78Show/hide
Query:  MSRLASSEKNQVMERVTVMDTTPIVRNSTYMVMDTMFMTTVTMGMVLMLIFWMITLDTMSEDLVETTFMMKVTMAKMLMLMAWMIAMDTLLKHMVHTTSM
        MS+L SS KN+VMERVTVM TTPIVRNSTYMVMDTMFMTTVT+ M LMLIFWMITLDTMSEDLVETTFMMKVTMAKMLMLMAWMIAMD LLKHMV+TTSM
Subjt:  MSRLASSEKNQVMERVTVMDTTPIVRNSTYMVMDTMFMTTVTMGMVLMLIFWMITLDTMSEDLVETTFMMKVTMAKMLMLMAWMIAMDTLLKHMVHTTSM

Query:  ITSRVTTATMAMTLILMAWMNSMDTTSMDMVDTMAPTTAKT
        ITSR+TTA MAMTLILMAWMNSMDTTSMDMVDTMAPTTA+T
Subjt:  ITSRVTTATMAMTLILMAWMNSMDTTSMDMVDTMAPTTAKT
TrEMBL top hitse value%identityAlignment
A0A6J1IFN7 uncharacterized protein LOC1114765243.0e-5490.78Show/hide
Query:  MSRLASSEKNQVMERVTVMDTTPIVRNSTYMVMDTMFMTTVTMGMVLMLIFWMITLDTMSEDLVETTFMMKVTMAKMLMLMAWMIAMDTLLKHMVHTTSM
        MS+L SS KN+VMERVTVM TTPIVRNSTYMVMDTMFMTTVT+ M LMLIFWMITLDTMSEDLVETTFMMKVTMAKMLMLMAWMIAMD LLKHMV+TTSM
Subjt:  MSRLASSEKNQVMERVTVMDTTPIVRNSTYMVMDTMFMTTVTMGMVLMLIFWMITLDTMSEDLVETTFMMKVTMAKMLMLMAWMIAMDTLLKHMVHTTSM

Query:  ITSRVTTATMAMTLILMAWMNSMDTTSMDMVDTMAPTTAKT
        ITSR+TTA MAMTLILMAWMNSMDTTSMDMVDTMAPTTA+T
Subjt:  ITSRVTTATMAMTLILMAWMNSMDTTSMDMVDTMAPTTAKT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCGGCTCGCTTCCTCGGAGAAGAACCAAGTGATGGAGAGAGTGACGGTCATGGATACGACCCCTATAGTCAGGAACAGTACTTATATGGTGATGGACACAATGTT
CATGACCACGGTCACCATGGGCATGGTGCTGATGTTGATATTTTGGATGATCACATTGGACACCATGTCGGAGGATCTGGTGGAGACCACGTTTATGATGAAGGTCACCA
TGGCCAAAATGTTGATGTTGATGGCTTGGATGATCGCTATGGACACCCTATTGAAGCACATGGTGCACACCACATCCATGATCACGAGCAGGGTGACCACGGCCACCATG
GCGATGACGCTAATATTAATGGCTTGGATGAACAGCATGGACACCACATCGATGGACATGGTGGACACCATGGCCCCAACGACGGCAAAGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAGCACCTGTTTAGCAAAGCAAAACTCAGCCAAAAATGACCTACTACAGGACCTTGCTCCTTCTCGACCTCCTCCTCGCTCTTCTTTTCGTCTCCTCCCATGTC
TCGGCTCGCTTCCTCGGAGAAGAACCAAGTGATGGAGAGAGTGACGGTCATGGATACGACCCCTATAGTCAGGAACAGTACTTATATGGTGATGGACACAATGTTCATGA
CCACGGTCACCATGGGCATGGTGCTGATGTTGATATTTTGGATGATCACATTGGACACCATGTCGGAGGATCTGGTGGAGACCACGTTTATGATGAAGGTCACCATGGCC
AAAATGTTGATGTTGATGGCTTGGATGATCGCTATGGACACCCTATTGAAGCACATGGTGCACACCACATCCATGATCACGAGCAGGGTGACCACGGCCACCATGGCGAT
GACGCTAATATTAATGGCTTGGATGAACAGCATGGACACCACATCGATGGACATGGTGGACACCATGGCCCCAACGACGGCAAAGACTTAAACGGACCCCACGGCCCCGA
CGGACCCCACGGACCCCACGAACCCCACGGCCCGCACGGACCCCACGGCCCGCACGGACCCCACGAACCCCACGGCCCGCACGAACCCC
Protein sequenceShow/hide protein sequence
MSRLASSEKNQVMERVTVMDTTPIVRNSTYMVMDTMFMTTVTMGMVLMLIFWMITLDTMSEDLVETTFMMKVTMAKMLMLMAWMIAMDTLLKHMVHTTSMITSRVTTATM
AMTLILMAWMNSMDTTSMDMVDTMAPTTAKT