; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G006570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G006570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description50S ribosomal protein L13, chloroplastic-like
Genome locationCmo_Chr09:3296461..3299749
RNA-Seq ExpressionCmoCh09G006570
SyntenyCmoCh09G006570
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR023563 - Ribosomal protein L13, conserved site
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591772.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.8e-14099.6Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSG+QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_022935984.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]7.5e-140100Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_022941245.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]4.7e-12691.53Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TF +HSTLNN + SNR IPR S V GFPLPQSKS  L TQTTITL S+ KSS  QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_022976844.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita maxima]2.7e-13798.79Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFFVHSTLNNGSKSNRGI RKSFVDGF LPQSKSYLLPTQTTITLNSQSKSS VQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_023536479.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]2.4e-13899.2Show/hide
Query:  MAMLCA-SSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWY
        MAMLCA SSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSG+QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWY
Subjt:  MAMLCA-SSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWY

Query:  PKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIE
        PKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIE
Subjt:  PKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIE

Query:  HAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        HAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  HAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

TrEMBL top hitse value%identityAlignment
A0A0A0KZG1 Uncharacterized protein6.2e-12488.71Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTF +HSTL NG+ SN+  PR S +  FPLP SKS  L TQT+I+L S SK S +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like3.6e-140100Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like2.3e-12691.53Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TF +HSTLNN + SNR IPR S V GFPLPQSKS  L TQTTITL S+ KSS  QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1IPT4 50S ribosomal protein L13, chloroplastic-like1.3e-13798.79Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFFVHSTLNNGSKSNRGI RKSFVDGF LPQSKSYLLPTQTTITLNSQSKSS VQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like3.9e-12691.53Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TF +HST NN + SNR IPRKS V GFPLPQSKS  L TQTTITL S+ KSS  QVRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

SwissProt top hitse value%identityAlignment
B1WQT8 50S ribosomal protein L132.2e-4969.47Show/hide
Query:  EKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPK
        ++ WYV+DATD+ LGRLA  +A  +RGK+ PTYTP +D G FVI++NA+KVAV+GRK TQKLYRRHSGRPGGM +ETF++LQQRIPERIIE AV+GMLPK
Subjt:  EKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPK

Query:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI
          LGR LF  LKVY GP+HPH+AQKP EL +
Subjt:  GRLGRALFNHLKVYKGPDHPHEAQKPVELPI

B8HMT1 50S ribosomal protein L133.4e-5067.12Show/hide
Query:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        NKT+ P      + E  WYVVDAT++ LGRLA+ IA  +RGK  P YTPS+D G FVIVVNAEKVAV+G+KRTQK+YRRHSGRPGGM  ETF +LQ R+P
Subjt:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR
        ERIIEHAV+GMLPK  LGR LF  LKVY GPDHPH+AQKP  L ++
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR

P12629 50S ribosomal protein L13, chloroplastic4.1e-8078.53Show/hide
Query:  LDRVPLEQRWMFEGDELDGPDIWNKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLY
        +  VPL+QRWMF  +E  GPDIWN TWYPK+ DHV T+K WYVVDATD ILGR+ASTIA HIRGK+L +YTPSVDMGAFVIVVNA+KVAVSG+KRTQKLY
Subjt:  LDRVPLEQRWMFEGDELDGPDIWNKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLY

Query:  RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        RRHSGRPGG+  ETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFNHLKVYKG +HPH+AQ+P++LP+RDKRI  E+
Subjt:  RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

Q3MF94 50S ribosomal protein L137.5e-5068.28Show/hide
Query:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+   YTP +D G FVIVVNAEKVAV+G+KRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPI
        ERI+EHAV+GMLPK  LG+ LF  LKVY GP HPH+AQKP EL I
Subjt:  ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPI

Q9SYL9 50S ribosomal protein L13, chloroplastic3.3e-9067.59Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC+SS+         L++ S  + G  RKS   GF L    + +      + + + SK  G+QV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEKVAVSG+KR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        RI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP++LPIRDKRI  ++
Subjt:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein2.4e-9167.59Show/hide
Query:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC+SS+         L++ S  + G  RKS   GF L    + +      + + + SK  G+QV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEKVAVSG+KR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAVDHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        RI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP++LPIRDKRI  ++
Subjt:  RIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

AT3G01790.1 Ribosomal protein L13 family protein1.2e-1838.4Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA+++  +GRK T K YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVE
               L++++G +HP    KP+E
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVE

AT3G01790.2 Ribosomal protein L13 family protein1.2e-1838.4Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA+++  +GRK T K YR H+G  G +   +      + P  +I  AV  MLP   L
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRL

Query:  GRALFNHLKVYKGPDHPHEAQKPVE
               L++++G +HP    KP+E
Subjt:  GRALFNHLKVYKGPDHPHEAQKPVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCTCTGTGCTTCCTCTTCTACACCCACTTTCTTTGTACATTCCACTCTTAACAATGGGAGCAAAAGTAACAGAGGCATTCCCAGAAAGTCATTCGTTGATGG
GTTTCCACTCCCACAATCAAAATCTTATTTGCTTCCAACTCAGACCACGATTACTCTGAATTCTCAGTCGAAGAGTTCGGGCGTTCAAGTGCGAGCTCAGGAGCTGGATC
GTGTCCCTTTAGAACAGCGGTGGATGTTCGAGGGGGACGAACTCGATGGCCCTGACATATGGAACAAAACATGGTACCCGAAGGCTGTAGATCATGTGAACACAGAAAAA
CCTTGGTATGTTGTTGATGCCACTGATAAGATATTGGGAAGATTAGCTTCGACCATTGCCAATCATATCCGAGGGAAGGATTTGCCAACCTACACTCCTAGTGTGGACAT
GGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTTGCCGTGTCGGGTAGAAAGAGGACACAAAAACTATACCGGAGGCATTCGGGGCGACCAGGTGGTATGACAGTAG
AAACTTTTGACCAGCTACAACAGAGAATTCCTGAAAGAATTATCGAGCATGCTGTTCGTGGTATGCTTCCGAAAGGGAGGCTTGGAAGAGCACTTTTTAACCACCTGAAG
GTTTACAAGGGACCAGACCATCCCCATGAGGCACAAAAGCCAGTTGAGCTGCCAATTAGGGACAAAAGGATAAACAAGGAAAGATAG
mRNA sequenceShow/hide mRNA sequence
CCCCGGGTTTCTCATTTTCGTATTCACAAAAGGTAGTCTTATCCGCTATCCATAGCAGAAATTCGCTACAATGGCGATGCTCTGTGCTTCCTCTTCTACACCCACTTTCT
TTGTACATTCCACTCTTAACAATGGGAGCAAAAGTAACAGAGGCATTCCCAGAAAGTCATTCGTTGATGGGTTTCCACTCCCACAATCAAAATCTTATTTGCTTCCAACT
CAGACCACGATTACTCTGAATTCTCAGTCGAAGAGTTCGGGCGTTCAAGTGCGAGCTCAGGAGCTGGATCGTGTCCCTTTAGAACAGCGGTGGATGTTCGAGGGGGACGA
ACTCGATGGCCCTGACATATGGAACAAAACATGGTACCCGAAGGCTGTAGATCATGTGAACACAGAAAAACCTTGGTATGTTGTTGATGCCACTGATAAGATATTGGGAA
GATTAGCTTCGACCATTGCCAATCATATCCGAGGGAAGGATTTGCCAACCTACACTCCTAGTGTGGACATGGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTTGCC
GTGTCGGGTAGAAAGAGGACACAAAAACTATACCGGAGGCATTCGGGGCGACCAGGTGGTATGACAGTAGAAACTTTTGACCAGCTACAACAGAGAATTCCTGAAAGAAT
TATCGAGCATGCTGTTCGTGGTATGCTTCCGAAAGGGAGGCTTGGAAGAGCACTTTTTAACCACCTGAAGGTTTACAAGGGACCAGACCATCCCCATGAGGCACAAAAGC
CAGTTGAGCTGCCAATTAGGGACAAAAGGATAAACAAGGAAAGATAGTACAAACGACGAAAACGATGAAGAAACAAAGCTCTCGTCTAAGGTTTCCAATGTTCATAAAGT
CGGAGTTAGCATTTTCATGCTTCAGCTTAATTTGATGTCAGTATTTGATCTGTAATTTGATTCCAAATTCTTCCAAGTTATTAACTCGTGATATGAGCAAATTTTTGAAT
CTTGTCCTGTTTGAAGGTTTGTTGTAATGGTGATTTTCATTAAATTTGTTGATTGATTTCCCTACCAGGAGGAATTTTTCTTGGTGTCAAAGTGGCCAAAAGTTTTGAAC
GATGG
Protein sequenceShow/hide protein sequence
MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQSKSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKAVDHVNTEK
PWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLK
VYKGPDHPHEAQKPVELPIRDKRINKER