; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G006690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G006690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCarbohydrate-binding X8 domain superfamily protein
Genome locationCmo_Chr09:3340757..3341386
RNA-Seq ExpressionCmoCh09G006690
SyntenyCmoCh09G006690
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591782.1 Glucan endo-1,3-beta-D-glucosidase, partial [Cucurbita argyrosperma subsp. sororia]4.5e-5986.36Show/hide
Query:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
        MAKAA LSFLFLL+FISG           GD LAV+GLVN T PNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
Subjt:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY

Query:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
        YNAEGD+QWNCDFRGSGVIVITNPSYGNCIYP
Subjt:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP

XP_022936900.1 glucan endo-1,3-beta-D-glucosidase-like [Cucurbita moschata]8.8e-6391.67Show/hide
Query:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
        MAKAAALSFLFLLSFISG           GDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
Subjt:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY

Query:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
        YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
Subjt:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP

XP_022976886.1 glucan endo-1,3-beta-D-glucosidase-like [Cucurbita maxima]5.3e-6088.64Show/hide
Query:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
        MAKAAAL FLFLLSFISG           GD LAVNGLVNATLPNQKTWCLPKPSSDQATLLGNI+FACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
Subjt:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY

Query:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
        YNAEGDDQWNCDFRGSGVIVITNPSY NCIYP
Subjt:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP

XP_023536201.1 glucan endo-1,3-beta-D-glucosidase-like isoform X1 [Cucurbita pepo subsp. pepo]4.1e-6088.64Show/hide
Query:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
        MAKAAALSFLFLLSFISG           GD LAVNGLVN T PNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
Subjt:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY

Query:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
        YNAEG DQWNCDFRGSGVIVITNPSYGNCIYP
Subjt:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP

XP_038899316.1 major pollen allergen Ole e 10 [Benincasa hispida]4.0e-3964.66Show/hide
Query:  MAKAAALSFLFL-LSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSL
        MAK+A LSFL L LSF+SG            D LAVN         QKTWC+PKPSSDQATLL NINFACS+VDC+I+Q+G  C  PDTL N A++AMSL
Subjt:  MAKAAALSFLFL-LSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSL

Query:  YYNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
        YYN++G +QWNCDFRGSG+IVIT+PSYGNCIYP
Subjt:  YYNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP

TrEMBL top hitse value%identityAlignment
A0A6J1FF08 glucan endo-1,3-beta-D-glucosidase-like4.3e-6391.67Show/hide
Query:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
        MAKAAALSFLFLLSFISG           GDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
Subjt:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY

Query:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
        YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
Subjt:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP

A0A6J1FNL6 glucan endo-1,3-beta-glucosidase-like isoform X14.3e-3961.36Show/hide
Query:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
        MAKAAA++  FLL F+S            GD LAVNG        QKTWC+ +PSSD ATLL NIN+ACS+VDC+I+Q+G  CF PD L NHAS+AM+LY
Subjt:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY

Query:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
        YN++G +QWNCDFRGSG+IVIT+PSYGNC+YP
Subjt:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP

A0A6J1II46 glucan endo-1,3-beta-D-glucosidase-like2.6e-6088.64Show/hide
Query:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
        MAKAAAL FLFLLSFISG           GD LAVNGLVNATLPNQKTWCLPKPSSDQATLLGNI+FACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
Subjt:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY

Query:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
        YNAEGDDQWNCDFRGSGVIVITNPSY NCIYP
Subjt:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP

A0A6J1IYM5 major pollen allergen Ole e 10-like isoform X22.8e-3859.85Show/hide
Query:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
        MAKAAA++  FLL F+S            GD LAVNG         +TWC+P+PSSD ATLL NI++ACS+VDC+I+Q+G  CF PD L NHAS+AM+LY
Subjt:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY

Query:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
        YN++G +QWNCDFRGSG+IVIT+PSYGNC+YP
Subjt:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP

A0A6J1J1Y2 major pollen allergen Ole e 10-like isoform X11.9e-3961.36Show/hide
Query:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY
        MAKAAA++  FLL F+S            GD LAVNG        QKTWC+P+PSSD ATLL NI++ACS+VDC+I+Q+G  CF PD L NHAS+AM+LY
Subjt:  MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLY

Query:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
        YN++G +QWNCDFRGSG+IVIT+PSYGNC+YP
Subjt:  YNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP

SwissProt top hitse value%identityAlignment
P52409 Glucan endo-1,3-beta-glucosidase1.9e-2048.19Show/hide
Query:  WCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCIY
        WC+ K  ++   L  NIN+AC  VDCK IQ GG+CF P++L  HAS  M+ YY A G     CDF+G+G++  ++PSYG C Y
Subjt:  WCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCIY

Q84V39 Major pollen allergen Ole e 102.0e-1742.53Show/hide
Query:  KTWCLPKPSSDQATLLGNINFACSK--VDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCIY
        K WC+PK  +  A L  NI++ CS+  +DC  IQ  G+CF+P+T+  HAS AM+ +Y ++G + ++CDF G+G I  ++PS G+C +
Subjt:  KTWCLPKPSSDQATLLGNINFACSK--VDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCIY

Q94G86 Glucan endo-1,3-beta-D-glucosidase4.6e-2248.84Show/hide
Query:  TWCLPKPSSDQATLLGNINFACSK-VDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
        +WC+PKP      L GNIN+AC + +DC  IQ GG+CF+P+T+  HA+  M+LYY + G + WNCDF  +  +  TNPSYG C +P
Subjt:  TWCLPKPSSDQATLLGNINFACSK-VDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP

Q9M069 Glucan endo-1,3-beta-glucosidase 72.2e-1637.65Show/hide
Query:  WCLPKPSSDQATLLGNINFACSK-VDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP
        WC+PK  +    L  ++++AC   +DC  IQ GG+CF+P+ + +HA+ AM++Y+        +CDF  +  +   NPSY NC+YP
Subjt:  WCLPKPSSDQATLLGNINFACSK-VDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCIYP

Q9ZU91 Glucan endo-1,3-beta-glucosidase 31.9e-1534.31Show/hide
Query:  LAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFAC--SKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCI
        LA  G + A     +T+C+ K   D+  L   +++AC   KVDC  + +G SC++PD +  H++ A + YY   G    +CDF+G   +  T+PS G C+
Subjt:  LAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFAC--SKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCI

Query:  YP
        +P
Subjt:  YP

Arabidopsis top hitse value%identityAlignment
AT1G78520.1 Carbohydrate-binding X8 domain superfamily protein3.3e-3162.35Show/hide
Query:  KTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCIY
        KTWC+ KPSSDQ  L  NINFACS VDC+++  G  C+ P  L NHAS+AM+LYY A G + WNC+F+ SG+I ITNPSYGNC Y
Subjt:  KTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCIY

AT2G43660.1 Carbohydrate-binding X8 domain superfamily protein3.9e-2442.4Show/hide
Query:  FLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFAC--SKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGD
        F+ LL   SG+F R                VNA  P Q +WC+ KP +    L+ N+N  C  S V C+++ EGG+C+DP  L+N ASV M+LYY  +G 
Subjt:  FLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFAC--SKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGD

Query:  DQWNCDFRGSGVIVITNPSYGNCIY
            CDF GSG+I +T+PSY  CIY
Subjt:  DQWNCDFRGSGVIVITNPSYGNCIY

AT2G43660.2 Carbohydrate-binding X8 domain superfamily protein8.6e-2448.42Show/hide
Query:  VNATLPNQKTWCLPKPSSDQATLLGNINFAC--SKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCIY
        VNA  P Q +WC+ KP +    L+ N+N  C  S V C+++ EGG+C+DP  L+N ASV M+LYY  +G     CDF GSG+I +T+PSY  CIY
Subjt:  VNATLPNQKTWCLPKPSSDQATLLGNINFAC--SKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYGNCIY

AT2G43670.1 Carbohydrate-binding X8 domain superfamily protein2.8e-3053.85Show/hide
Query:  PRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYG
        P G+F+ V     +       WC+ KPS+D   L  NINFACSK+DC+II EGG+C+ PD++ + ASVAM+LYY A+G   WNC+F GSG+I IT+PSYG
Subjt:  PRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPSYG

Query:  NCIY
        +CIY
Subjt:  NCIY

AT3G28250.1 Carbohydrate-binding X8 domain superfamily protein4.7e-2251.95Show/hide
Query:  WCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPS
        WC+ KP +    L+ N+N+ACS VDC+II   G+C+ PD ++N ASV M+LYY AEG + WNC+F  SG++ IT+PS
Subjt:  WCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWNCDFRGSGVIVITNPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAGCGGCCGCTCTCTCCTTCTTGTTTCTCCTCTCGTTCATTTCAGGTGCGTTTTCTCGATCTATTCGGATTCCGCCAAGAGGAGATTTTCTTGCGGTAAATGG
ACTGGTGAACGCGACGTTACCAAATCAGAAGACGTGGTGCCTCCCGAAGCCATCGTCGGATCAAGCGACGCTGTTAGGGAATATCAATTTCGCTTGTTCGAAGGTAGATT
GCAAAATAATACAAGAAGGAGGCTCCTGCTTTGATCCTGATACTCTGTTCAACCATGCCTCTGTAGCTATGAGTCTGTACTACAATGCGGAAGGAGACGATCAGTGGAAC
TGTGATTTCAGAGGCTCTGGTGTGATTGTCATCACTAATCCAAGTTATGGAAACTGCATTTACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAGCGGCCGCTCTCTCCTTCTTGTTTCTCCTCTCGTTCATTTCAGGTGCGTTTTCTCGATCTATTCGGATTCCGCCAAGAGGAGATTTTCTTGCGGTAAATGG
ACTGGTGAACGCGACGTTACCAAATCAGAAGACGTGGTGCCTCCCGAAGCCATCGTCGGATCAAGCGACGCTGTTAGGGAATATCAATTTCGCTTGTTCGAAGGTAGATT
GCAAAATAATACAAGAAGGAGGCTCCTGCTTTGATCCTGATACTCTGTTCAACCATGCCTCTGTAGCTATGAGTCTGTACTACAATGCGGAAGGAGACGATCAGTGGAAC
TGTGATTTCAGAGGCTCTGGTGTGATTGTCATCACTAATCCAAGTTATGGAAACTGCATTTACCCTTGAATCAGTATAC
Protein sequenceShow/hide protein sequence
MAKAAALSFLFLLSFISGAFSRSIRIPPRGDFLAVNGLVNATLPNQKTWCLPKPSSDQATLLGNINFACSKVDCKIIQEGGSCFDPDTLFNHASVAMSLYYNAEGDDQWN
CDFRGSGVIVITNPSYGNCIYP