; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G007300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G007300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAuxin-responsive family protein
Genome locationCmo_Chr09:3644591..3645046
RNA-Seq ExpressionCmoCh09G007300
SyntenyCmoCh09G007300
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024703.1 hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-7394.87Show/hide
Query:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEERE---EHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALID
        MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEERE   EHEEREGFE+VSGSNVIIYVGSTRKRYTISSKYLSHPLLNALID
Subjt:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEERE---EHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALID

Query:  KSKPPKGNEEDDDE--CISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF
        KSKPPKGNE+DDD+  CISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF
Subjt:  KSKPPKGNEEDDDE--CISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF

XP_011653970.1 auxin-responsive protein SAUR78 [Cucumis sativus]3.6e-5273.75Show/hide
Query:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSK
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCE+  E+ E+  E          +KVSGSNVI+YVGSTRK+Y I+SKYLSHPLLNALIDKSK
Subjt:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSK

Query:  PPK---------GNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF
          K            EDD+ECI VRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Subjt:  PPK---------GNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF

XP_022135446.1 uncharacterized protein LOC111007398 [Momordica charantia]1.0e-5176.32Show/hide
Query:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKS
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW +C   ME  EE EE E+H++++  EKV GSNVI+YVGSTRK+Y ISSK+LSHPL+NALIDKS
Subjt:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKS

Query:  KPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF
        K    ++ +D E ISVRCEVVLFDHLLWMLENSDPNI FDSNLEELA+LYVF
Subjt:  KPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF

XP_023536060.1 auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]2.0e-7194.74Show/hide
Query:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSK
        MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC+RTMEEHEE EE EE EE EGFEKVSGSNVIIYVGSTRKRY ISSKYLSHPLLNALIDKSK
Subjt:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSK

Query:  PPKG-NEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF
        PPKG NE+DDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF
Subjt:  PPKG-NEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF

XP_038899559.1 auxin-responsive protein SAUR78 [Benincasa hispida]2.7e-5276.62Show/hide
Query:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSK
        M K+N LLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC   MEE +  +++++       EKVSG++VI+YVGSTRKRY ISSKYLSHPLLNALIDKSK
Subjt:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSK

Query:  PPKGNEEDDDE---CISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF
          K    DDDE   CISVRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Subjt:  PPKGNEEDDDE---CISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF

TrEMBL top hitse value%identityAlignment
A0A1S3B9J9 uncharacterized protein LOC1034876595.2e-4969.33Show/hide
Query:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSG-SNVIIYVGSTRKRYTISSKYLSHPLLNALIDKS
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCE+          +EE  E++  +KVSG +NV++YVGSTRK+Y I+SKYL HPLLNALIDKS
Subjt:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSG-SNVIIYVGSTRKRYTISSKYLSHPLLNALIDKS

Query:  KPPK-----------GNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF
        K  K            ++ DD++CI VRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Subjt:  KPPK-----------GNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF

A0A2C9UHW2 Uncharacterized protein1.9e-3561.84Show/hide
Query:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSK
        M K+N +LRKCKSLSRQLGRSSSYSSLRSKSTRED+W  ++        +E+EEHE              I+VGSTRKRY I+SKYLSHPL+NALI+KSK
Subjt:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSK

Query:  PPKGNEEDDDECISVRCEVVLFDHLLWMLENSDP-NICFDSNLEELAELYVF
           G     +E + V+CEVVLFDHLLWMLEN+DP N+  DS LEELA+LYVF
Subjt:  PPKGNEEDDDECISVRCEVVLFDHLLWMLENSDP-NICFDSNLEELAELYVF

A0A3N7FTM7 Uncharacterized protein1.5e-3561.59Show/hide
Query:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSK
        M K+N +LRKCKSLSRQLGRSSSYSSLRSKSTREDLW         +  +E E HE              I+VGSTRKRY ISSKYLSHPL+NALI+KS+
Subjt:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSK

Query:  PPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF
           G    +D  + V+CEVV FDHLLWMLEN+DPN  FDS LEELA+LY+F
Subjt:  PPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF

A0A6J1C0S4 uncharacterized protein LOC1110073985.1e-5276.32Show/hide
Query:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKS
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW +C   ME  EE EE E+H++++  EKV GSNVI+YVGSTRK+Y ISSK+LSHPL+NALIDKS
Subjt:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKS

Query:  KPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF
        K    ++ +D E ISVRCEVVLFDHLLWMLENSDPNI FDSNLEELA+LYVF
Subjt:  KPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF

B9RI47 Uncharacterized protein1.0e-3663.58Show/hide
Query:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSK
        M K+N +LRKCKSLSRQLGRSSSYSSLRSKSTRE+LW         +  EE EEH+              ++VGSTRKRY ISSKYLSHPL+NALI KSK
Subjt:  MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSK

Query:  PPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF
          +G     +E + V+CEVVLFDHLLWMLEN+DPN+ FDS LEELAELYVF
Subjt:  PPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF

SwissProt top hitse value%identityAlignment
Q29PU2 Auxin-responsive protein SAUR768.4e-1246.84Show/hide
Query:  IYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELY
        +YVG TR+ Y +SS  +SHPL   L        G    +D  ISV CEVVLF+HLLWMLEN+D +     ++ EL E Y
Subjt:  IYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELY

Q9C9E1 Auxin-responsive protein SAUR781.9e-1141.46Show/hide
Query:  IIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF
        ++YVG TR+ Y +    +SHPL   L+D+S        + D  I V CEVVLF+HLLWML++         ++EELAE Y +
Subjt:  IIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF

Q9LQI6 Auxin-responsive protein SAUR771.3e-1243.68Show/hide
Query:  IIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENS-----DPNICFDSNLEELAELYVF
        ++YVG +R+ Y +SS  ++HPL   L+D+S      E  D E + V CEVVLF+HLLWML+NS     D +     ++EELAE Y +
Subjt:  IIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENS-----DPNICFDSNLEELAELYVF

Arabidopsis top hitse value%identityAlignment
AT1G17345.1 SAUR-like auxin-responsive protein family9.2e-1443.68Show/hide
Query:  IIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENS-----DPNICFDSNLEELAELYVF
        ++YVG +R+ Y +SS  ++HPL   L+D+S      E  D E + V CEVVLF+HLLWML+NS     D +     ++EELAE Y +
Subjt:  IIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENS-----DPNICFDSNLEELAELYVF

AT1G72430.1 SAUR-like auxin-responsive protein family1.3e-1241.46Show/hide
Query:  IIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF
        ++YVG TR+ Y +    +SHPL   L+D+S        + D  I V CEVVLF+HLLWML++         ++EELAE Y +
Subjt:  IIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF

AT3G12955.1 SAUR-like auxin-responsive protein family8.3e-2342.67Show/hide
Query:  MKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSKP
        M++  +LR+CKS+S QLGRS SY+SLRSKS R D                 ++H +             + VG T+K Y IS K+L HPLLNAL++K + 
Subjt:  MKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSKP

Query:  PKGNEEDDDEC-ISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYV
         + ++ +D  C I+V+CEVVLFDHLLWMLE  D     +S L++ A LY+
Subjt:  PKGNEEDDDEC-ISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYV

AT5G20810.1 SAUR-like auxin-responsive protein family1.3e-0428.43Show/hide
Query:  ERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFD
        +R ++      + E  +  E    V   N+ +YVG   +R+ I + YLSH L   L++K++   G   D    +++ CEV  F +LL  +EN+  ++  D
Subjt:  ERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFD

Query:  SN
         N
Subjt:  SN

AT5G20820.1 SAUR-like auxin-responsive protein family6.0e-1346.84Show/hide
Query:  IYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELY
        +YVG TR+ Y +SS  +SHPL   L        G    +D  ISV CEVVLF+HLLWMLEN+D +     ++ EL E Y
Subjt:  IYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDDECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAAATGAATTCTCTGTTGAGGAAATGCAAGAGCCTTTCAAGGCAATTGGGGAGGTCCTCTTCATACAGCAGCTTGAGGTCAAAATCCACAAGGGAAGATCTATG
GGTTTGTGAAAGAACGATGGAAGAACACGAAGAACACGAAGAACGCGAAGAACACGAAGAACGCGAAGGGTTTGAAAAGGTGAGTGGCAGTAATGTAATTATCTATGTTG
GGAGTACAAGGAAGCGATATACAATAAGTTCAAAGTATTTGAGCCATCCTTTGCTTAATGCTCTTATTGATAAATCAAAACCTCCTAAGGGTAATGAAGAAGATGATGAT
GAGTGCATTTCGGTGAGATGTGAAGTTGTTCTGTTCGATCATCTCTTGTGGATGTTGGAGAATTCTGATCCGAATATTTGTTTTGATTCTAATTTGGAGGAATTGGCTGA
GCTTTATGTGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAAATGAATTCTCTGTTGAGGAAATGCAAGAGCCTTTCAAGGCAATTGGGGAGGTCCTCTTCATACAGCAGCTTGAGGTCAAAATCCACAAGGGAAGATCTATG
GGTTTGTGAAAGAACGATGGAAGAACACGAAGAACACGAAGAACGCGAAGAACACGAAGAACGCGAAGGGTTTGAAAAGGTGAGTGGCAGTAATGTAATTATCTATGTTG
GGAGTACAAGGAAGCGATATACAATAAGTTCAAAGTATTTGAGCCATCCTTTGCTTAATGCTCTTATTGATAAATCAAAACCTCCTAAGGGTAATGAAGAAGATGATGAT
GAGTGCATTTCGGTGAGATGTGAAGTTGTTCTGTTCGATCATCTCTTGTGGATGTTGGAGAATTCTGATCCGAATATTTGTTTTGATTCTAATTTGGAGGAATTGGCTGA
GCTTTATGTGTTTTGA
Protein sequenceShow/hide protein sequence
MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHEEREGFEKVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEEDDD
ECISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF