; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G007610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G007610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionplastid transcriptionally active 6
Genome locationCmo_Chr09:3849854..3853344
RNA-Seq ExpressionCmoCh09G007610
SyntenyCmoCh09G007610
Gene Ontology termsGO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
InterPro domainsIPR044710 - PLASTID TRANSCRIPTIONALLY ACTIVE protein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591867.1 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-17987.31Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSL YRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL  A
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF
        AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQK   
Subjt:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF

Query:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS
                 YIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVL                
Subjt:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS

Query:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
           VTVPGGRARDRRSDLLVVRDNGNSFKIIH               SSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_008444205.1 PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]9.2e-16983.16Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        MNSTVFLLS PLPP TI+RLR  SISAA+SL HLPSL YRKSTPSASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L   
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF
        AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQK   
Subjt:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF

Query:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS
                 YIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRA+VL                
Subjt:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS

Query:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
           VTVPGGR RDRRSDLLVVRDNGNSFKIIH               SSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_022935749.1 uncharacterized protein LOC111442572 [Cucurbita moschata]8.5e-18388.08Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF
        AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQK   
Subjt:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF

Query:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS
                 YIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVL                
Subjt:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS

Query:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
           VTVPGGRARDRRSDLLVVRDNGNSFKIIH               SSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_022976812.1 uncharacterized protein LOC111477076 [Cucurbita maxima]2.6e-17987.11Show/hide
Query:  MNSTVFLLSS--PLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLA
        MNSTVFLLSS  PLPPATIHRLRPPSISAASSL HLPSL YRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLA
Subjt:  MNSTVFLLSS--PLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLA

Query:  AAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKV
        AAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQK 
Subjt:  AAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKV

Query:  PFFVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTI
                   YIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVL              
Subjt:  PFFVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTI

Query:  SSKLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
             VTVPGGRARDRRSDLLVVRDNGNSFKIIH               SSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SSKLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_023534952.1 uncharacterized protein LOC111796527 [Cucurbita pepo subsp. pepo]7.0e-17786.53Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        MNSTVFLLSSPLPPATIHRLRPPSISAASSL HL S  YRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL  A
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF
        AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQK   
Subjt:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF

Query:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS
                 YIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVL                
Subjt:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS

Query:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
           VTVPGGRARDRRSDLLVVRDNGNSFKIIH               SSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

TrEMBL top hitse value%identityAlignment
A0A1S3BAM8 uncharacterized protein LOC1034876134.4e-16983.16Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        MNSTVFLLS PLPP TI+RLR  SISAA+SL HLPSL YRKSTPSASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L   
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF
        AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQK   
Subjt:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF

Query:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS
                 YIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRA+VL                
Subjt:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS

Query:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
           VTVPGGR RDRRSDLLVVRDNGNSFKIIH               SSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A5A7UA32 Uncharacterized protein1.4e-16782.9Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        MNSTVFLLS PLPP TI+RLR  SISAA+SL HLPSL YRKSTPSASPLF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L   
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF
        AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQK   
Subjt:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF

Query:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS
                 YIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRA+VL                
Subjt:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS

Query:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
           VTVPGGR RDRRSDLLVVRDNGNSFKIIH               SSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Subjt:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A5J5BWI0 Uncharacterized protein9.7e-13265.8Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        M +T+ L   PL P  +     P ++  +SLH  P+L +    P  + +F PR + FRV++DDGD D GGPDDYDM ++E+EEVDNKKD+D+EYD LAAA
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF
        AA+A       G GD++I +V SKSFVS QGWDSE IVDYRINE+EFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDTD+YAIP+VLAP+PQK   
Subjt:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF

Query:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS
                 YIRCA+SDYGCYNVTEPPIDAPRDPLYKSE E+ KVFLTKH+RNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVL                
Subjt:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS

Query:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
           VTVPGGR RDR+ DLLV+RDNGNSFKIIH               SS+R+DPTTVIE+EEW KTRQDMERHLRKLRDFS+SNWF
Subjt:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1F6A7 uncharacterized protein LOC1114425724.1e-18388.08Show/hide
Query:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
        MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA
Subjt:  MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAA

Query:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF
        AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQK   
Subjt:  AAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPF

Query:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS
                 YIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVL                
Subjt:  FVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISS

Query:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
           VTVPGGRARDRRSDLLVVRDNGNSFKIIH               SSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  KLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1IGR4 uncharacterized protein LOC1114770761.2e-17987.11Show/hide
Query:  MNSTVFLLSS--PLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLA
        MNSTVFLLSS  PLPPATIHRLRPPSISAASSL HLPSL YRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLA
Subjt:  MNSTVFLLSS--PLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLA

Query:  AAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKV
        AAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQK 
Subjt:  AAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKV

Query:  PFFVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTI
                   YIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVL              
Subjt:  PFFVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTI

Query:  SSKLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
             VTVPGGRARDRRSDLLVVRDNGNSFKIIH               SSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SSKLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

SwissProt top hitse value%identityAlignment
Q9XI19 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic2.3e-12269.23Show/hide
Query:  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRK
        DD D D GG D+YDM D+E+EEVDNKKD+D+EYD LAAA AAA       G GD +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRK
Subjt:  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRK

Query:  PPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPFFVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEF
        PPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQK            YIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEF
Subjt:  PPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPFFVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEF

Query:  VLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISSKLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKE
        VLD EEIYVIDSKTKSITRA+VL                   VTVPGGR RDR+ DLLV+RDNG SFKIIH                 ERDDPTTVIE+E
Subjt:  VLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISSKLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKE

Query:  EWTKTRQDMERHLRKLRDFSISNWF
        EWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  EWTKTRQDMERHLRKLRDFSISNWF

Arabidopsis top hitse value%identityAlignment
AT1G21600.1 plastid transcriptionally active 61.6e-12369.23Show/hide
Query:  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRK
        DD D D GG D+YDM D+E+EEVDNKKD+D+EYD LAAA AAA       G GD +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRK
Subjt:  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRK

Query:  PPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPFFVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEF
        PPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQK            YIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEF
Subjt:  PPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPFFVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEF

Query:  VLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISSKLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKE
        VLD EEIYVIDSKTKSITRA+VL                   VTVPGGR RDR+ DLLV+RDNG SFKIIH                 ERDDPTTVIE+E
Subjt:  VLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISSKLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKE

Query:  EWTKTRQDMERHLRKLRDFSISNWF
        EWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  EWTKTRQDMERHLRKLRDFSISNWF

AT1G21600.2 plastid transcriptionally active 61.6e-12369.23Show/hide
Query:  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRK
        DD D D GG D+YDM D+E+EEVDNKKD+D+EYD LAAA AAA       G GD +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRK
Subjt:  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRK

Query:  PPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPFFVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEF
        PPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQK            YIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEF
Subjt:  PPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPFFVFYIHQEHYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEF

Query:  VLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISSKLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKE
        VLD EEIYVIDSKTKSITRA+VL                   VTVPGGR RDR+ DLLV+RDNG SFKIIH                 ERDDPTTVIE+E
Subjt:  VLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISSKLEVTVPGGRARDRRSDLLVVRDNGNSFKIIHSVSVSYLPDFCSILCSSERDDPTTVIEKE

Query:  EWTKTRQDMERHLRKLRDFSISNWF
        EWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  EWTKTRQDMERHLRKLRDFSISNWF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCACCGTTTTTCTCCTCTCGTCGCCGTTGCCGCCGGCCACAATCCACCGTCTGCGACCTCCTTCCATTTCCGCCGCAAGTTCTCTTCACCACCTCCCTAGTTT
GCTCTACCGAAAATCTACTCCCTCTGCATCCCCTCTCTTCGTCCCTAGAAGAAACCCTTTCCGCGTCTTCTCCGATGACGGCGACGGAGATAGTGGCGGCCCCGATGACT
ACGATATGTACGACGACGAAATGGAAGAAGTCGATAACAAGAAAGATTTCGACATCGAGTACGATACTCTAGCCGCCGCGGCTGCGGCTGCGGCTGCGGCTGCGGGTTCT
GAAGGCGTCGGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTATCGACGCAGGGATGGGATTCGGAGATGATCGTGGATTATAGGATAAACGAGGAGGAGTT
TCATAAGATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGCCGCCGGATCCTGACAATGATGTGTACGATTTCCGAGAGATGTATGTTACTCCTCCTGACACTGATG
TTTATGCTATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGGTACCATTCTTTGTGTTTTATATACATCAAGAACATTATATTAGATGCGCTCAGAGTGATTATGGATGT
TACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCATTATACAAGTCTGAGAAGGAGGTTCTTAAGGTATTCTTGACGAAGCACTTCAGAAACCGAAGGTTGGG
TGACCCGGAATTCGTCCTAGACTTTGAGGAAATATATGTGATCGATTCAAAAACCAAGTCAATCACCAGGGCTAAAGTCTTGGTAAGACTCTTTGTTCTTGGGTTCTGCA
CCGTTTCGACGATAAGTTCAAAACTCGAGGTCACAGTTCCTGGCGGACGAGCTAGGGACAGGAGAAGCGACTTACTTGTCGTTCGGGATAATGGGAACTCTTTCAAGATT
ATCCATTCGGTATCGGTTTCTTATCTACCTGATTTCTGTAGCATTCTCTGCTCTAGCGAACGAGATGATCCGACCACGGTGATAGAGAAGGAAGAGTGGACGAAAACTAG
ACAAGATATGGAGAGACATCTTAGAAAGCTAAGGGACTTCAGCATTTCAAATTGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATCCGACAATATCCATCTACAAACTCCAATCCCGCCATGAACTCCACCGTTTTTCTCCTCTCGTCGCCGTTGCCGCCGGCCACAATCCACCGTCTGCGACCTCCTTCCAT
TTCCGCCGCAAGTTCTCTTCACCACCTCCCTAGTTTGCTCTACCGAAAATCTACTCCCTCTGCATCCCCTCTCTTCGTCCCTAGAAGAAACCCTTTCCGCGTCTTCTCCG
ATGACGGCGACGGAGATAGTGGCGGCCCCGATGACTACGATATGTACGACGACGAAATGGAAGAAGTCGATAACAAGAAAGATTTCGACATCGAGTACGATACTCTAGCC
GCCGCGGCTGCGGCTGCGGCTGCGGCTGCGGGTTCTGAAGGCGTCGGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTATCGACGCAGGGATGGGATTCGGA
GATGATCGTGGATTATAGGATAAACGAGGAGGAGTTTCATAAGATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGCCGCCGGATCCTGACAATGATGTGTACGATT
TCCGAGAGATGTATGTTACTCCTCCTGACACTGATGTTTATGCTATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGGTACCATTCTTTGTGTTTTATATACATCAAGAA
CATTATATTAGATGCGCTCAGAGTGATTATGGATGTTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCATTATACAAGTCTGAGAAGGAGGTTCTTAAGGT
ATTCTTGACGAAGCACTTCAGAAACCGAAGGTTGGGTGACCCGGAATTCGTCCTAGACTTTGAGGAAATATATGTGATCGATTCAAAAACCAAGTCAATCACCAGGGCTA
AAGTCTTGGTAAGACTCTTTGTTCTTGGGTTCTGCACCGTTTCGACGATAAGTTCAAAACTCGAGGTCACAGTTCCTGGCGGACGAGCTAGGGACAGGAGAAGCGACTTA
CTTGTCGTTCGGGATAATGGGAACTCTTTCAAGATTATCCATTCGGTATCGGTTTCTTATCTACCTGATTTCTGTAGCATTCTCTGCTCTAGCGAACGAGATGATCCGAC
CACGGTGATAGAGAAGGAAGAGTGGACGAAAACTAGACAAGATATGGAGAGACATCTTAGAAAGCTAAGGGACTTCAGCATTTCAAATTGGTTTTAAACAACCATGCAAA
AGTTATGGTTTTGAAGTTTAAGCGTTGACATGAACGAGACATCCAGGTTACCCGTCACGACATTTCTCTCGTGCGAGTTCTCGACAGATCTCCTGCTCCATGCCCTCGTG
ATAGGTAATGTTTTCGGTTACGGCTAGTTACTTACACTTGCAATGATTGATCTTTCGGGTTCGTTCTACTCGCTTTCGTTCTTCGTCATCGTTAATCTAGGAAAGCTAGC
TTTTTATAGATTTGTAATGCTTAGAAAAGAAAAAATGGTTGCATCTTTTGGCTGTTTGCTGCAGTTGTCGGTTCTGTTTTGATTAACCATTGTAAGAAAATTTTGAATTC
TTGTGTTATATGGGGTTAGAACTGCTGTGAACTGATGCAATTTGAAGCAAAGAAACATTCATAACTGTCCAATGGTCTATAGCT
Protein sequenceShow/hide protein sequence
MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGS
EGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKVPFFVFYIHQEHYIRCAQSDYGC
YNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVRLFVLGFCTVSTISSKLEVTVPGGRARDRRSDLLVVRDNGNSFKI
IHSVSVSYLPDFCSILCSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF