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CmoCh09G007700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G007700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein HAPLESS 2 isoform X1
Genome locationCmo_Chr09:3905729..3908992
RNA-Seq ExpressionCmoCh09G007700
SyntenyCmoCh09G007700
Gene Ontology termsGO:0051603 - proteolysis involved in cellular protein catabolic process (biological process)
GO:0005839 - proteasome core complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591875.1 hypothetical protein SDJN03_14221, partial [Cucurbita argyrosperma subsp. sororia]7.9e-2696.83Show/hide
Query:  MFFEIDYPIKLLRSRWRANLICNVASSLASGPAVCGSTWDFIENFCVADLLKMGMILILSYFG
        MF EIDYPIKLLRS WRANLICNVASSLASGPAVCGSTWDFIENFCVADLLKMGMILILSYFG
Subjt:  MFFEIDYPIKLLRSRWRANLICNVASSLASGPAVCGSTWDFIENFCVADLLKMGMILILSYFG

XP_022976879.1 uncharacterized protein LOC111477113 isoform X1 [Cucurbita maxima]1.1e-2467.29Show/hide
Query:  MFFEIDYPIKLLRSRWRANLICNVASSLAS-------------------GPAVCGSTWDFIENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCI--
        MF EIDYPI L    WRANLICNVASSLAS                   GPAVCGST DFIENFCVADLLKMGMILILSYFG+LLLCLLHK+GVFG    
Subjt:  MFFEIDYPIKLLRSRWRANLICNVASSLAS-------------------GPAVCGSTWDFIENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCI--

Query:  GRGREGS
        G+ R GS
Subjt:  GRGREGS

XP_022976880.1 uncharacterized protein LOC111477113 isoform X2 [Cucurbita maxima]5.1e-1768.29Show/hide
Query:  MFFEIDYPIKLLRSRWRANLICNVASSLAS-------------------GPAVCGSTWDFIENFCVADLLKMGMILILSYFG
        MF EIDYPI L    WRANLICNVASSLAS                   GPAVCGST DFIENFCVADLLKMGMILILSYFG
Subjt:  MFFEIDYPIKLLRSRWRANLICNVASSLAS-------------------GPAVCGSTWDFIENFCVADLLKMGMILILSYFG

XP_023534929.1 uncharacterized protein LOC111796509 isoform X1 [Cucurbita pepo subsp. pepo]1.6e-3476.64Show/hide
Query:  MFFEIDYPIKLLRSRWRANLICNVASSLAS-------------------GPAVCGSTWDFIENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCIGR
        MF EIDYPIKLLRS WRANLIC VASSLAS                   GPAVCGSTWDFIENFC+ADLLKMGMILILSYFGILLLCLLHKIGVFGCIGR
Subjt:  MFFEIDYPIKLLRSRWRANLICNVASSLAS-------------------GPAVCGSTWDFIENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCIGR

Query:  GREGSAE
         R GSAE
Subjt:  GREGSAE

XP_023534930.1 uncharacterized protein LOC111796509 isoform X2 [Cucurbita pepo subsp. pepo]1.5e-2171.95Show/hide
Query:  MFFEIDYPIKLLRSRWRANLICNVASSLAS-------------------GPAVCGSTWDFIENFCVADLLKMGMILILSYFG
        MF EIDYPIKLLRS WRANLIC VASSLAS                   GPAVCGSTWDFIENFC+ADLLKMGMILILSYFG
Subjt:  MFFEIDYPIKLLRSRWRANLICNVASSLAS-------------------GPAVCGSTWDFIENFCVADLLKMGMILILSYFG

TrEMBL top hitse value%identityAlignment
A0A1S4DVV8 protein HAPLESS 2 isoform X13.7e-1377.36Show/hide
Query:  AVCGSTWDF---IENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCIGRG
        +VCGSTWDF   IENFCVA+L+KMGM+ ILSYF +LLL LLHKIG+FGCIGRG
Subjt:  AVCGSTWDF---IENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCIGRG

A0A6J1FIX0 uncharacterized protein LOC1114458939.8e-1458.33Show/hide
Query:  NVASSLASG---------------------PAVCGSTWDF---IENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCIGRG
        NVASSLASG                      +VCGSTWDF   IENFCVA+LLKMGM++IL+YF +LLL L HKIG+FGCIGRG
Subjt:  NVASSLASG---------------------PAVCGSTWDF---IENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCIGRG

A0A6J1IKP7 uncharacterized protein LOC111477113 isoform X22.5e-1768.29Show/hide
Query:  MFFEIDYPIKLLRSRWRANLICNVASSLAS-------------------GPAVCGSTWDFIENFCVADLLKMGMILILSYFG
        MF EIDYPI L    WRANLICNVASSLAS                   GPAVCGST DFIENFCVADLLKMGMILILSYFG
Subjt:  MFFEIDYPIKLLRSRWRANLICNVASSLAS-------------------GPAVCGSTWDFIENFCVADLLKMGMILILSYFG

A0A6J1IPW7 uncharacterized protein LOC111477113 isoform X15.5e-2567.29Show/hide
Query:  MFFEIDYPIKLLRSRWRANLICNVASSLAS-------------------GPAVCGSTWDFIENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCI--
        MF EIDYPI L    WRANLICNVASSLAS                   GPAVCGST DFIENFCVADLLKMGMILILSYFG+LLLCLLHK+GVFG    
Subjt:  MFFEIDYPIKLLRSRWRANLICNVASSLAS-------------------GPAVCGSTWDFIENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCI--

Query:  GRGREGS
        G+ R GS
Subjt:  GRGREGS

A0A6J1IVE5 uncharacterized protein LOC1114803129.8e-1458.33Show/hide
Query:  NVASSLASG---------------------PAVCGSTWDF---IENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCIGRG
        NVASSLASG                      +VCGSTWDF   IENFCVA+LLKMGM++IL+YF +LLL L HKIG+FGCIGRG
Subjt:  NVASSLASG---------------------PAVCGSTWDF---IENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCIGRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21722.1 unknown protein6.1e-0852.83Show/hide
Query:  AVCGSTWDFI---ENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCIGRG
        +VC S WDFI   ENFCVA+L K  +ILILSYF +  + +L+K+G + CI  G
Subjt:  AVCGSTWDFI---ENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCIGRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCGAAATCGATTATCCGATCAAGCTTCTTCGATCGCGCTGGCGTGCAAATCTCATCTGTAATGTAGCCAGCTCATTGGCCTCTGGACCTGCAGTTTGTGGATC
AACATGGGATTTCATAGAGAATTTCTGCGTTGCCGATTTGCTAAAGATGGGCATGATCTTGATTCTTTCATACTTTGGTATTTTACTCCTATGTTTATTACATAAAATTG
GCGTCTTCGGCTGCATCGGTCGGGGTCGGGAGGGTTCTGCAGAACGATATGGACTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
CCTCCGCCCTCCATTCTTCTTCCATCTGCTGTTCTTCATTTCGCGGTGCTCTTTAAGCATTCTAATCGATGTAATTGTTTCATTTTAAATTTCTTTCTTTCTGCGTATGT
TCTTCGAAATCGATTATCCGATCAAGCTTCTTCGATCGCGCTGGCGTGCAAATCTCATCTGTAATGTAGCCAGCTCATTGGCCTCTGGACCTGCAGTTTGTGGATCAACA
TGGGATTTCATAGAGAATTTCTGCGTTGCCGATTTGCTAAAGATGGGCATGATCTTGATTCTTTCATACTTTGGTATTTTACTCCTATGTTTATTACATAAAATTGGCGT
CTTCGGCTGCATCGGTCGGGGTCGGGAGGGTTCTGCAGAACGATATGGACTTGTTTAGCTTGTCATTGTCAAAAGAACAAGAAGGCAGGCACTTTAGAAGAAAGGACCTG
GAAGAAAAGTTTGAAAGTGAAGAAGGAAAACATCGGCATGGGGTCAACAAGCGATTCGAGCAATTTCCCCAAACGTGTTGAGTCGAGAACTAGCAGACGGGTGTCTCGTA
GATAGATGAGGAACCACAGAGGTTTTGAAGTGAGAAAGTCATCGAGGTCGAAAAGTCATGGAATTCGAGTTAAGGAAGAGTAGAGTGTTGGTCTATGGTAAGCACAGAAG
AAAATCTGTTGAGGTTGGGACTCATTTGAATGAGATTCTCCACAATAGTATGATATTGTCCACTTTGAGCGTAAGCTCTTAAGCTCTTATGGCTTTGCTTTGGGCTTCCC
CAAAAAGTCTTATACCAACGGGAGAAAGAGAATATGGAAGAGGAAGGCAAAGACGGTAGCAGCTGGCTGGGATTTGAAGAGTATTTAACAAAGGTA
Protein sequenceShow/hide protein sequence
MFFEIDYPIKLLRSRWRANLICNVASSLASGPAVCGSTWDFIENFCVADLLKMGMILILSYFGILLLCLLHKIGVFGCIGRGREGSAERYGLV