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CmoCh09G008000 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G008000
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein
Genome locationCmo_Chr09:4095461..4097955
RNA-Seq ExpressionCmoCh09G008000
SyntenyCmoCh09G008000
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591905.1 hypothetical protein SDJN03_14251, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4198.94Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS
        MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVN+SESLS
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS

XP_022138625.1 uncharacterized protein LOC111009737 [Momordica charantia]5.3e-3893.62Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS
        MGS E VKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAA+ASV +SES S
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS

XP_022937150.1 uncharacterized protein LOC111443534 [Cucurbita moschata]1.4e-41100Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS
        MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS

XP_022976612.1 uncharacterized protein LOC111476955 [Cucurbita maxima]1.8e-4198.94Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS
        MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG+SACEREHAERQMKLLEAQNSAAEASVNESESLS
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS

XP_038899123.1 uncharacterized protein LOC120086511 [Benincasa hispida]7.0e-3893.68Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNESESLS
        MGSQE VKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL EAQNSAAEAS+N+SES S
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNESESLS

TrEMBL top hitse value%identityAlignment
A0A0B2PI48 Uncharacterized protein1.1e-3690.11Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESE
        MG +E VKHLE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQN+AAE S+ E+E
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESE

A0A6A1UYF7 Uncharacterized protein5.8e-3894.44Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNES
        MG QE VKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAA+AS+NE+
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNES

A0A6J1C9Z5 uncharacterized protein LOC1110097372.6e-3893.62Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS
        MGS E VKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAA+ASV +SES S
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS

A0A6J1FFR1 uncharacterized protein LOC1114435346.6e-42100Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS
        MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS

A0A6J1IG79 uncharacterized protein LOC1114769558.6e-4298.94Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS
        MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG+SACEREHAERQMKLLEAQNSAAEASVNESESLS
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21930.1 unknown protein6.5e-3474.49Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVN----ESESLS
        MGSQE VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE QMKLL+   +A   + N    ES S+S
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVN----ESESLS

AT3G42150.1 unknown protein3.6e-3273.12Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNESES
        MGSQ+ VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL ++QN+    +   +E+
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNESES

AT3G42150.2 unknown protein3.6e-3273.12Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNESES
        MGSQ+ VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL ++QN+    +   +E+
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNESES

AT3G42150.3 unknown protein3.6e-3273.12Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNESES
        MGSQ+ VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL ++QN+    +   +E+
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNESES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCCAAGAACAAGTGAAGCATCTTGAGGAGTGCTCAGTTTCAAATGCGCTGGGCACTTGGGTATTCTCAGTAGCAGGAGCGTTGCTAGCAATTCCAGTGGGAAT
AAAGAGGAAGTCACTGGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGATATTATAATGGGAATCAGTGCCTGTGAAAGAGAACATGCTGAGCGTCAAATGA
AGCTATTAGAAGCCCAAAACTCTGCAGCCGAAGCTTCTGTTAACGAATCTGAGTCCCTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
CTCGCAATAATACTAATTTCAACATCCCCAGATCGAAAGTCTGTAAAGTTCCTCGCCGGAGAAGCGTCATCCTCGCCGTCAACCAGTGTTCAGTAATTGAGGAAGAGCTA
TGGGAAGCCAAGAACAAGTGAAGCATCTTGAGGAGTGCTCAGTTTCAAATGCGCTGGGCACTTGGGTATTCTCAGTAGCAGGAGCGTTGCTAGCAATTCCAGTGGGAATA
AAGAGGAAGTCACTGGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGATATTATAATGGGAATCAGTGCCTGTGAAAGAGAACATGCTGAGCGTCAAATGAA
GCTATTAGAAGCCCAAAACTCTGCAGCCGAAGCTTCTGTTAACGAATCTGAGTCCCTTTCTTGATATCATTGCTTACACGGTTGTATCTGATGAATATCTTTGTGGCATG
GCCCTTGGCTGATTTGTTACAGCCTTCTTTCTTCAAACCCACAGTGACACTGAATGAGTTATGGTTTCTCCCACAGTGACACTGAATGAGTTATGGTTTC
Protein sequenceShow/hide protein sequence
MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNESESLS