; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G008760 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G008760
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCytochrome f
Genome locationCmo_Chr09:4539849..4540121
RNA-Seq ExpressionCmoCh09G008760
SyntenyCmoCh09G008760
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0031361 - integral component of thylakoid membrane (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR002325 - Cytochrome f
IPR036826 - Cytochrome f large domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2281520.1 hypothetical protein Bca52824_052740 [Brassica carinata]9.8e-0952.38Show/hide
Query:  MQSKQVLANEKMSGLNVGPPIVLLSRLKKKWAICLFRAYCRFLVSYSFHSEITSPF-------KKDVHFLKYPIYVGGNRGRGQ
        MQ KQVLAN K   LNVG P  +   +K+K     F+ Y    V    +SEIT P         KDVHFLKYPIYVGGNRGRGQ
Subjt:  MQSKQVLANEKMSGLNVGPPIVLLSRLKKKWAICLFRAYCRFLVSYSFHSEITSPF-------KKDVHFLKYPIYVGGNRGRGQ

PWA58605.1 component of cytochrome b6/f complex, chloroplast [Artemisia annua]5.7e-0946.15Show/hide
Query:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAYC----RFL----VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR
        MQ KQVLAN K  GLNVG            PP  +   +K+K     F++YC      L    V    +SEIT P        KKD+HFLKYPIYVGGNR
Subjt:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAYC----RFL----VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR

Query:  GRGQ
        GRGQ
Subjt:  GRGQ

QHO46263.1 Cytochrome f [Arachis hypogaea]3.6e-1150.49Show/hide
Query:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAYC---RFL----VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNRG
        MQ KQVLAN K   LNVG            PPIV   RLKK W I LF+A     + L    V    +SEIT P        ++DVHFLKYPIYVGGNRG
Subjt:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAYC---RFL----VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNRG

Query:  RGQ
        RGQ
Subjt:  RGQ

RYR44118.1 hypothetical protein Ahy_A08g040502 isoform B [Arachis hypogaea]8.0e-1150Show/hide
Query:  MQSKQVLANEKMSGLNV------------GPPIVLLSRLKKKWAICLFRAYCRFL--------VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR
        MQ KQVLAN K   LNV            GPPIV   RLKK W I LF+A  R          V    +SEIT P        K+DVHFLKYPIYVG NR
Subjt:  MQSKQVLANEKMSGLNV------------GPPIVLLSRLKKKWAICLFRAYCRFL--------VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR

Query:  GRGQ
        GRGQ
Subjt:  GRGQ

XP_038896628.1 LOW QUALITY PROTEIN: cytochrome f-like [Benincasa hispida]4.7e-1147.66Show/hide
Query:  MQSKQVLANEKMSGLNVG---------------PPIVLLSRLKKKWAICLFRAYCRFL--------VSYSFHSEITSPF-------KKDVHFLKYPIYVG
        MQ KQVLAN KM GLNVG               PP  +   +K+K  ICLFRA             V    +SEIT P        KKDVHFLKYPIY+G
Subjt:  MQSKQVLANEKMSGLNVG---------------PPIVLLSRLKKKWAICLFRAYCRFL--------VSYSFHSEITSPF-------KKDVHFLKYPIYVG

Query:  GNRGRGQ
        GNRGRGQ
Subjt:  GNRGRGQ

TrEMBL top hitse value%identityAlignment
A0A2U1MBH4 Cytochrome f2.8e-0946.15Show/hide
Query:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAYC----RFL----VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR
        MQ KQVLAN K  GLNVG            PP  +   +K+K     F++YC      L    V    +SEIT P        KKD+HFLKYPIYVGGNR
Subjt:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAYC----RFL----VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR

Query:  GRGQ
        GRGQ
Subjt:  GRGQ

A0A445C025 Cytochrome f3.9e-1150Show/hide
Query:  MQSKQVLANEKMSGLNV------------GPPIVLLSRLKKKWAICLFRAYCRFL--------VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR
        MQ KQVLAN K   LNV            GPPIV   RLKK W I LF+A  R          V    +SEIT P        K+DVHFLKYPIYVG NR
Subjt:  MQSKQVLANEKMSGLNV------------GPPIVLLSRLKKKWAICLFRAYCRFL--------VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR

Query:  GRGQ
        GRGQ
Subjt:  GRGQ

A0A6M3S6K6 Cytochrome f1.1e-0846.15Show/hide
Query:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAYCRFL--------VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR
        MQ KQVLAN K  GLNVG            PP  +   +K+K     F++Y            VS   +SEIT P        KKDVHFLKYPIYVGGNR
Subjt:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAYCRFL--------VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR

Query:  GRGQ
        GRGQ
Subjt:  GRGQ

A0A6M9QEM7 Cytochrome f3.1e-0846.15Show/hide
Query:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAY--------CRFLVSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR
        MQ KQVLAN K  GLNVG            PP  +   LK+K     F++Y            V    +SEIT P        KKDVHFLKYPIYVGGNR
Subjt:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAY--------CRFLVSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR

Query:  GRGQ
        GRGQ
Subjt:  GRGQ

A0A7U1ART1 Cytochrome f1.8e-0845.19Show/hide
Query:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAYC----RFLVSYSF----HSEITSPF-------KKDVHFLKYPIYVGGNR
        +Q KQVLAN K   LNVG            PP  +   +K+K     F++YC      LV        +SEIT P        KKDVHFLKYPIYVGGNR
Subjt:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAYC----RFLVSYSF----HSEITSPF-------KKDVHFLKYPIYVGGNR

Query:  GRGQ
        GRGQ
Subjt:  GRGQ

SwissProt top hitse value%identityAlignment
P16013 Cytochrome f1.4e-1045.19Show/hide
Query:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAY--------CRFLVSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR
        MQ KQVLAN K  GLNVG            PP  +   +K+K     F++Y            V    +SEIT P        KKDVHFLKYPIYVGGNR
Subjt:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAY--------CRFLVSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR

Query:  GRGQ
        GRGQ
Subjt:  GRGQ

Q2MI87 Cytochrome f1.4e-1046.15Show/hide
Query:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAY----CRFL----VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR
        MQ KQVLAN K  GLNVG            PP  +   +K+K     F++Y       L    V    +SEIT P        KKDVHFLKYPIYVGGNR
Subjt:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAY----CRFL----VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR

Query:  GRGQ
        GRGQ
Subjt:  GRGQ

Q2MIH4 Cytochrome f1.4e-1046.15Show/hide
Query:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAY----CRFL----VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR
        MQ KQVLAN K  GLNVG            PP  +   +K+K     F++Y       L    V    +SEIT P        KKDVHFLKYPIYVGGNR
Subjt:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAY----CRFL----VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR

Query:  GRGQ
        GRGQ
Subjt:  GRGQ

Q2QD76 Cytochrome f1.1e-1045.19Show/hide
Query:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAYCRFL--------VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR
        MQ KQVLAN K  GLNVG            PP  +   +K+K     F++Y            V    +SEIT P        KKDVHFLKYPIYVGGNR
Subjt:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAYCRFL--------VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR

Query:  GRGQ
        GRGQ
Subjt:  GRGQ

Q2VEG4 Cytochrome f1.4e-1046.15Show/hide
Query:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAY----CRFL----VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR
        MQ KQVLAN K  GLNVG            PP  +   +K+K     F++Y       L    V    +SEIT P        KKDVHFLKYPIYVGGNR
Subjt:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAY----CRFL----VSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR

Query:  GRGQ
        GRGQ
Subjt:  GRGQ

Arabidopsis top hitse value%identityAlignment
ATCG00540.1 photosynthetic electron transfer A7.2e-1043.27Show/hide
Query:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAY--------CRFLVSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR
        MQ KQVLAN K   LNVG            PP  +   +K+K     F+ Y            V    +SEIT P         KDVHFLKYPIYVGGNR
Subjt:  MQSKQVLANEKMSGLNVG------------PPIVLLSRLKKKWAICLFRAY--------CRFLVSYSFHSEITSPF-------KKDVHFLKYPIYVGGNR

Query:  GRGQ
        GRGQ
Subjt:  GRGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCGAAACAAGTTCTTGCGAATGAGAAGATGAGTGGTTTGAATGTGGGGCCTCCGATCGTACTTCTCTCGAGATTAAAGAAAAAATGGGCAATCTGTCTTTTCAG
AGCTTATTGTCGGTTCCTGGTCTCTTATTCTTTCCATAGTGAAATCACCTCACCTTTTAAGAAAGATGTTCACTTCTTAAAATATCCCATATACGTAGGCGGGAACAGGG
GAAGGGGTCAGGGGTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAATCGAAACAAGTTCTTGCGAATGAGAAGATGAGTGGTTTGAATGTGGGGCCTCCGATCGTACTTCTCTCGAGATTAAAGAAAAAATGGGCAATCTGTCTTTTCAG
AGCTTATTGTCGGTTCCTGGTCTCTTATTCTTTCCATAGTGAAATCACCTCACCTTTTAAGAAAGATGTTCACTTCTTAAAATATCCCATATACGTAGGCGGGAACAGGG
GAAGGGGTCAGGGGTCGTAA
Protein sequenceShow/hide protein sequence
MQSKQVLANEKMSGLNVGPPIVLLSRLKKKWAICLFRAYCRFLVSYSFHSEITSPFKKDVHFLKYPIYVGGNRGRGQGS