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CmoCh09G009300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G009300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRNAase
Genome locationCmo_Chr09:4860139..4860541
RNA-Seq ExpressionCmoCh09G009300
SyntenyCmoCh09G009300
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016020 - membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEU56313.1 multi antimicrobial extrusion protein [Tanacetum cinerariifolium]2.8e-0860Show/hide
Query:  VVAILLGMVENLTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS
        VV+  + +   +T   SPRAHI+ KVWHLDV SS PG VV+SKG  VRPLKRY+S
Subjt:  VVAILLGMVENLTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS

KAG8491524.1 hypothetical protein CXB51_014904 [Gossypium anomalum]1.8e-1087.18Show/hide
Query:  SPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS
        SPRAHIDGKVWHLDV SSPPGAVV SKG  VRPLKRY+S
Subjt:  SPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS

KAG9438656.1 hypothetical protein H6P81_021399 [Aristolochia fimbriata]2.8e-0866.67Show/hide
Query:  VAILLGMVENLTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKR
        VA  + +   +T   SPR HIDGKVWHLDV SSPPGAVV SKG  VRPLKR
Subjt:  VAILLGMVENLTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKR

QCE13761.1 hypothetical protein DEO72_LG11g759 [Vigna unguiculata]1.3e-1067.27Show/hide
Query:  VVAILLGMVENLTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS
        VV   + +   +T + SPRAHIDGKVWHL VSSSPPGAVV SKG  VRPLKRY+S
Subjt:  VVAILLGMVENLTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS

QHN95447.1 uncharacterized protein DS421_18g609690 [Arachis hypogaea]2.1e-0873.81Show/hide
Query:  PVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS
        P      HIDGKVWHLDV SSPPGAVV SKG  VRPLKRY+S
Subjt:  PVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS

TrEMBL top hitse value%identityAlignment
A0A0A2U3F5 RNAase3.9e-0868.18Show/hide
Query:  LTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS
        +T +  PR HIDG+VWHLDV SS PGAVV  KG  VRPLKRY+S
Subjt:  LTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS

A0A0J1FIM8 Uncharacterized protein3.9e-0868.18Show/hide
Query:  LTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS
        +T +  PR HIDG+VWHLDV SS PGAVV  KG  VRPLKRY+S
Subjt:  LTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS

A0A4D6NLE9 Uncharacterized protein6.5e-1167.27Show/hide
Query:  VVAILLGMVENLTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS
        VV   + +   +T + SPRAHIDGKVWHL VSSSPPGAVV SKG  VRPLKRY+S
Subjt:  VVAILLGMVENLTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS

A0A6A5L4C2 Uncharacterized protein3.9e-0876.92Show/hide
Query:  SPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS
        SPR HIDG+VWHLDV SS PGAVV  KG  VRPLKRY+S
Subjt:  SPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS

A0A6L2L370 Protein DETOXIFICATION1.4e-0860Show/hide
Query:  VVAILLGMVENLTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS
        VV+  + +   +T   SPRAHI+ KVWHLDV SS PG VV+SKG  VRPLKRY+S
Subjt:  VVAILLGMVENLTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGAAGCAGTGTTCTGTTGAAAGCTTTCCTGCTTGCTAAGATAACACCAGCAACTAACATTCCTGTGGTGGCAATACTGCTTGGGATGGTTGAAAATCTGACACC
GGTAGGTTCCCCAAGAGCTCACATCGACGGAAAGGTTTGGCACCTCGATGTCAGCTCTTCGCCACCTGGGGCTGTAGTATTTTCCAAGGGTAGGGTTGTTCGCCCATTAA
AGCGGTACATAAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGAAGCAGTGTTCTGTTGAAAGCTTTCCTGCTTGCTAAGATAACACCAGCAACTAACATTCCTGTGGTGGCAATACTGCTTGGGATGGTTGAAAATCTGACACC
GGTAGGTTCCCCAAGAGCTCACATCGACGGAAAGGTTTGGCACCTCGATGTCAGCTCTTCGCCACCTGGGGCTGTAGTATTTTCCAAGGGTAGGGTTGTTCGCCCATTAA
AGCGGTACATAAGCTAG
Protein sequenceShow/hide protein sequence
MQRSSVLLKAFLLAKITPATNIPVVAILLGMVENLTPVGSPRAHIDGKVWHLDVSSSPPGAVVFSKGRVVRPLKRYIS