CuGenDBv2

Gene ID	CmoCh09G009330
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Vascular-related unknown protein 4
Genome location	Cmo_Chr09:4878210..4879757
RNA-Seq Expression	CmoCh09G009330
Synteny	CmoCh09G009330
Gene Ontology terms	GO:0010089 - xylem development (biological process)
InterPro domains	IPR039280 - VASCULAR-RELATED UNKNOWN PROTEIN

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7024902.1 hypothetical protein SDJN02_13722, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-70

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE
        MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYP+ADAASSVVDHKLLENHDGAAMDPGFSCKDHIN FKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE

Query:  VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
        +                    VHERRE GDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
Subjt:  VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

XP_022937320.1 vascular-related unknown protein 4-like isoform X1 [Cucurbita moschata]

3.4e-85

88.89

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE
        MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE

Query:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
                            VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
Subjt:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

XP_022976591.1 vascular-related unknown protein 4-like isoform X1 [Cucurbita maxima]

4.8e-79

83.33

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE
        MAKESSAHTS+ HGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSS+P SPDQSYP+ADAASSVVDHKLL NHDGAAM PGFSCKDHINFFKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE

Query:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
                            VCDSNYFSKNPRHKGKLITPQV ERR+IGDLIGIGSEYTELKKRGLCLVPFSMI+NYMDQ
Subjt:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

XP_022976592.1 vascular-related unknown protein 4-like isoform X2 [Cucurbita maxima]

1.2e-69

77.22

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE
        MAKESSAHTS+ HGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSS+P SPDQSYP+ADAASSVVDHKLL NHDGAAM PGFSCKDHINFFKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE

Query:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
                            VCDSNYFSKNPRHKGKLITPQV ERR+I           ELKKRGLCLVPFSMI+NYMDQ
Subjt:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

XP_023534855.1 vascular-related unknown protein 4-like isoform X1 [Cucurbita pepo subsp. pepo]

2.1e-71

78.89

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE
        MAKESSAHTSV HGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSS+PLSPDQSYP+ADAASSVVDHKLL NHDGAAMDPGFSCKDHIN FKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE

Query:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
                            VCDSNYFSKNPRHKGKLITPQV ERRE           TELKKRGLCLVPFSMI+NYMDQ
Subjt:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

TrEMBL top hits

e value

%identity

Alignment

A0A6J1FA17 Uncharacterized protein

2.6e-62

83.56

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE
        MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE

Query:  --------------------VCDSNYFSKNPRHKGKLITPQVHERR
                            VCDSNYFSKNPRHKGKLITPQ+ E +
Subjt:  --------------------VCDSNYFSKNPRHKGKLITPQVHERR

A0A6J1FG95 Uncharacterized protein

1.7e-85

88.89

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE
        MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE

Query:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
                            VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
Subjt:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

A0A6J1IG62 Uncharacterized protein

5.7e-70

77.22

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE
        MAKESSAHTS+ HGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSS+P SPDQSYP+ADAASSVVDHKLL NHDGAAM PGFSCKDHINFFKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE

Query:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
                            VCDSNYFSKNPRHKGKLITPQV ERR+I           ELKKRGLCLVPFSMI+NYMDQ
Subjt:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

A0A6J1IHA8 Uncharacterized protein

2.3e-79

83.33

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE
        MAKESSAHTS+ HGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSS+P SPDQSYP+ADAASSVVDHKLL NHDGAAM PGFSCKDHINFFKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE

Query:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
                            VCDSNYFSKNPRHKGKLITPQV ERR+IGDLIGIGSEYTELKKRGLCLVPFSMI+NYMDQ
Subjt:  --------------------VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

A0A6J1IMM8 Uncharacterized protein

1.1e-57

79.86

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE
        MAKESSAHTS+ HGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSS+P SPDQSYP+ADAASSVVDHKLL NHDGAAM PGFSCKDHINFFKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYE

Query:  --------------------VCDSNYFSKNPRHKGKLITPQVHE
                            VCDSNYFSKNPRHKGKLITPQ+ E
Subjt:  --------------------VCDSNYFSKNPRHKGKLITPQVHE

SwissProt top hits

e value

%identity

Alignment

Q5BPG5 Vascular-related unknown protein 4

1.3e-07

28.14

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Query:  SAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLL--ENHDGAAMDPGFSCKDHINFFKKRKM------
        S H +     DQ+ EES WT+YFEDF            S S   +    S  ++DAAS V   K L     +G+ +D   +    I F +   +      
Subjt:  SAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLL--ENHDGAAMDPGFSCKDHINFFKKRKM------

Query:  ------IYEVCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYM
              +Y +   N    N RH G ++     + + +  +   G    +LKK+GLCLVP SM+ N++
Subjt:  ------IYEVCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYM

Q9LSZ3 Vascular-related unknown protein 1

6.8e-04

23.16

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Query:  AHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKM-----IYEV
        AH    HGGD   EESGWT Y +DF N +  T+               SY +   ++S+V         G +    F  K      + +K+     + + 
Subjt:  AHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKM-----IYEV

Query:  CDSNYFSKNPRHKGKLITP------QVHERREIGDLIGIG----------------------------SEYTELKKRGLCLVPFSMILNY
          S   S    H   + TP       V     +G++ G+G                            +   +L+ RGLC+VP SM+ N+
Subjt:  CDSNYFSKNPRHKGKLITP------QVHERREIGDLIGIG----------------------------SEYTELKKRGLCLVPFSMILNY

Arabidopsis top hits

e value

%identity

Alignment

AT3G21710.2 unknown protein

4.9e-05

23.16

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Query:  AHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKM-----IYEV
        AH    HGGD   EESGWT Y +DF N +  T+               SY +   ++S+V         G +    F  K      + +K+     + + 
Subjt:  AHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKM-----IYEV

Query:  CDSNYFSKNPRHKGKLITP------QVHERREIGDLIGIG----------------------------SEYTELKKRGLCLVPFSMILNY
          S   S    H   + TP       V     +G++ G+G                            +   +L+ RGLC+VP SM+ N+
Subjt:  CDSNYFSKNPRHKGKLITP------QVHERREIGDLIGIG----------------------------SEYTELKKRGLCLVPFSMILNY

AT5G54790.1 unknown protein

9.5e-09

28.14

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Query:  SAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLL--ENHDGAAMDPGFSCKDHINFFKKRKM------
        S H +     DQ+ EES WT+YFEDF            S S   +    S  ++DAAS V   K L     +G+ +D   +    I F +   +      
Subjt:  SAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLL--ENHDGAAMDPGFSCKDHINFFKKRKM------

Query:  ------IYEVCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYM
              +Y +   N    N RH G ++     + + +  +   G    +LKK+GLCLVP SM+ N++
Subjt:  ------IYEVCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYM

Sequences

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CDS sequence

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ATGGCCAAAGAAAGCTCCGCCCATACTTCCGTCTGCCACGGCGGCGATCAGTCGTCGGAGGAGAGTGGTTGGACCATCTACTTTGAAGATTTCCTCAACAACCACCACCC
TACTAATCAACCACCCACCTCCTTCTCTTCTTTTCCTCTCTCTCCCGATCAAAGCTACCCTATCGCCGACGCTGCTTCCTCCGTCGTGGACCACAAACTACTCGAAAACC
ACGACGGAGCCGCCATGGATCCCGGGTTTAGCTGCAAGGATCATATCAACTTTTTCAAGAAGAGGAAGATGATCTATGAGGTCTGTGATTCGAACTACTTCAGTAAAAAC
CCGAGGCACAAAGGGAAACTGATAACTCCTCAGGTACATGAGAGAAGAGAAATAGGTGATTTAATTGGAATTGGCAGTGAGTACACAGAATTGAAGAAAAGAGGGCTTTG
CTTAGTACCTTTTTCTATGATACTTAATTATATGGATCAATAA

mRNA sequence

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Protein sequence

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MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIADAASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYEVCDSNYFSKN
PRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

CmoCh09G009330 (gene) of Cucurbita moschata (Rifu) v1 genome