CuGenDBv2

Gene ID	CmoCh09G009380
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	SBP-type domain-containing protein
Genome location	Cmo_Chr09:4926333..4927022
RNA-Seq Expression	CmoCh09G009380
Synteny	CmoCh09G009380
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6592032.1 hypothetical protein SDJN03_14378, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-57

98.44

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIK-SSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNN
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIK SSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNN
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIK-SSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNN

Query:  RSFGKSHNATKAGSRDVHRMPMLGSNDM
        RSFGKSHNATKAGSRDVHRMPMLGSND+
Subjt:  RSFGKSHNATKAGSRDVHRMPMLGSNDM

KAG7024908.1 hypothetical protein SDJN02_13728, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.7e-56

96.9

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIK--SSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMR DPKKSVTPRIK  SSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIK--SSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN

Query:  NRSFGKSHNATKAGSRDVHRMPMLGSNDM
        NRSFGKSHNATKAGSRDVHRMPMLGSND+
Subjt:  NRSFGKSHNATKAGSRDVHRMPMLGSNDM

XP_022937400.1 uncharacterized protein LOC111443703 [Cucurbita moschata]

5.7e-59

99.21

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR

Query:  SFGKSHNATKAGSRDVHRMPMLGSNDM
        SFGKSHNATKAGSRDVHRMPMLGSND+
Subjt:  SFGKSHNATKAGSRDVHRMPMLGSNDM

XP_022976588.1 uncharacterized protein LOC111476940 [Cucurbita maxima]

2.1e-53

92.91

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMR  PKK V  +IKSSS+TRTVSSAASIPNRL QSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR

Query:  SFGKSHNATKAGSRDVHRMPMLGSNDM
        SFGKSHNATKAGSRDVHRMPMLGSND+
Subjt:  SFGKSHNATKAGSRDVHRMPMLGSNDM

XP_023536516.1 uncharacterized protein LOC111797670 [Cucurbita pepo subsp. pepo]

5.0e-55

94.49

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMR +PKK VTP++KSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR

Query:  SFGKSHNATKAGSRDVHRMPMLGSNDM
        SFGKSHNATKAGSRDV RMPMLGSND+
Subjt:  SFGKSHNATKAGSRDVHRMPMLGSNDM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAQ8 Uncharacterized protein

4.0e-34

71.32

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSS--STRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
        MVQKLQPIKGGGGS+ VGATGTISSLMMRELESMR   KK VT + KSSS  +T TVSS               AASIP RL QSKSF EVS+RRYN+VN
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSS--STRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN

Query:  NRSFGKSHNATKAGSRDVHRMPMLGSNDM
        NRSFG SHNATK GSRDVHRMPML SND+
Subjt:  NRSFGKSHNATKAGSRDVHRMPMLGSNDM

A0A1S3BYW8 uncharacterized protein LOC103494914

8.1e-35

70.87

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR
        MVQKLQPIKGGGGSI VGATGTISSLMMRELESMR   KK VT + KSSS+T T ++ +S            A SIP RL QSKSF EVS+RRYN+VNNR
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR

Query:  SFGKSHNATKAGSRDVHRMPMLGSNDM
        SFG SHNATK GSRDVHRMPML SND+
Subjt:  SFGKSHNATKAGSRDVHRMPMLGSNDM

A0A5D3B9E2 Uncharacterized protein

8.1e-35

70.87

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR
        MVQKLQPIKGGGGSI VGATGTISSLMMRELESMR   KK VT + KSSS+T T ++ +S            A SIP RL QSKSF EVS+RRYN+VNNR
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR

Query:  SFGKSHNATKAGSRDVHRMPMLGSNDM
        SFG SHNATK GSRDVHRMPML SND+
Subjt:  SFGKSHNATKAGSRDVHRMPMLGSNDM

A0A6J1FA89 uncharacterized protein LOC111443703

2.8e-59

99.21

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR

Query:  SFGKSHNATKAGSRDVHRMPMLGSNDM
        SFGKSHNATKAGSRDVHRMPMLGSND+
Subjt:  SFGKSHNATKAGSRDVHRMPMLGSNDM

A0A6J1INY9 uncharacterized protein LOC111476940

1.0e-53

92.91

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMR  PKK V  +IKSSS+TRTVSSAASIPNRL QSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR

Query:  SFGKSHNATKAGSRDVHRMPMLGSNDM
        SFGKSHNATKAGSRDVHRMPMLGSND+
Subjt:  SFGKSHNATKAGSRDVHRMPMLGSNDM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G54850.1 unknown protein

1.9e-12

39.71

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR
        MVQKL+ IKGGGGSI +GATGT+++LM REL+SM     K  +P+  ++   RT     +IP  +    S   +S P R +  KS DE S+   + VNN 
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNR

Query:  SFGKSHNATKAGSRDVHRMPMLGSNDMGIAIERNQK
           K HNA     +  H++ MLGS+++  +   N K
Subjt:  SFGKSHNATKAGSRDVHRMPMLGSNDMGIAIERNQK

Sequences

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CDS sequence

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ATGGTTCAGAAACTGCAACCTATCAAAGGAGGTGGAGGATCCATCAATGTTGGAGCCACCGGAACGATTAGCTCCCTAATGATGAGGGAATTAGAGTCTATGAGATGCGA
CCCGAAAAAGTCGGTAACTCCCAGAATCAAATCTTCATCTTCTACTAGGACTGTTTCATCTGCTGCTTCCATTCCTAACAGACTACAACAAAGTAAATCGTTCGACGCTG
CATCCATTCCTAACAGACTACAACAAAGTAAATCGTTCGACGAGGTAAGCAATAGAAGGTATAATACCGTTAATAACCGAAGCTTTGGGAAGTCTCATAATGCTACTAAA
GCCGGTTCGAGGGATGTCCATCGTATGCCAATGCTTGGTTCTAATGATATGGGCATAGCTATAGAGAGAAACCAGAAAGGAAAGGACTTAGAGCAGTTCCAATTGTGGAC
GTTAAGTGTAATAACCCGGATAGAGCTTGGTCTAGCCGCCCTCTATCAAGTCGACTCAGAAAACTCGGTTTTTCAAAACTATCAGAAACCTTCGCTTGAATTCTGCAAGA
CTTTCTATCAGAATATTTGTCACTTTAGGAGGGTTGTACAGAAAGAACTTCTTGTGGAGCCTGTAACTGAGTCCCGACGACCCGAAAATCAACGAATGGTTGCATAA

mRNA sequence

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Protein sequence

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MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRCDPKKSVTPRIKSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNRSFGKSHNATK
AGSRDVHRMPMLGSNDMGIAIERNQKGKDLEQFQLWTLSVITRIELGLAALYQVDSENSVFQNYQKPSLEFCKTFYQNICHFRRVVQKELLVEPVTESRRPENQRMVA

CmoCh09G009380 (gene) of Cucurbita moschata (Rifu) v1 genome