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CmoCh09G009640 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G009640
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNAD(P)H-quinone oxidoreductase chain 4, chloroplastic
Genome locationCmo_Chr09:5092638..5092992
RNA-Seq ExpressionCmoCh09G009640
SyntenyCmoCh09G009640
Gene Ontology termsGO:0009060 - aerobic respiration (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003954 - NADH dehydrogenase activity (molecular function)
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5631586.1 hypothetical protein H5410_003303 [Solanum commersonii]4.9e-1767.12Show/hide
Query:  TIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPALNFETSANQSYPV
        T F+HVGVRIN  LSTS +VGR EM V +YK+YFVH  G  +F LMGV+G  LYGSN+P LNFETS NQSY V
Subjt:  TIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPALNFETSANQSYPV

OTF84302.1 putative NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit [Helianthus annuus]4.6e-1546.96Show/hide
Query:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA
        MY+G+IGSF +RDLLLF I+     I   +                          SI+VGRKE  + ++K+YFVH  G   FSL GV+G+GLYGSN+P 
Subjt:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA

Query:  LNFETSANQSYPVVL
        LNFETS NQSYPV L
Subjt:  LNFETSANQSYPVVL

QHE65873.1 NADH-plastoquinone oxidoreductase subunit 4 [Corydalis trisecta]2.0e-1866.23Show/hide
Query:  NLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPALNFETSANQSYPVVL
        + T FYHVGVRIN  L TSI+VGRKE  V +YKV FVH  G   F LMGV+G+G YGSN+  L+FETSANQSYPV L
Subjt:  NLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPALNFETSANQSYPVVL

VDD26381.1 unnamed protein product [Brassica rapa]2.2e-1746.96Show/hide
Query:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA
        MY+G+IGSF +RD+                            F+HVG+RIN RLS  I+VG KE  VF+YK+YF+H R   FF L+GV+GI LYGSN+P 
Subjt:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA

Query:  LNFETSANQSYPVVL
        LN E   NQ+YPV L
Subjt:  LNFETSANQSYPVVL

YP_010010482.1 NADH-plastoquinone oxidoreductase subunit 4 [Hippeastrum rutilum]1.3e-1750.43Show/hide
Query:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA
        MY+G+IG F +RDLLLF                         FYHVGVRIN  L T I+VGRKE  V  YKVYFVH  G  F      +G+GLYGSN+P 
Subjt:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA

Query:  LNFETSANQSYPVVL
        L+FE  ANQSYPV L
Subjt:  LNFETSANQSYPVVL

TrEMBL top hitse value%identityAlignment
A0A1Y3BU67 Putative NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit2.2e-1546.96Show/hide
Query:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA
        MY+G+IGSF +RDLLLF I+     I   +                          SI+VGRKE  + ++K+YFVH  G   FSL GV+G+GLYGSN+P 
Subjt:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA

Query:  LNFETSANQSYPVVL
        LNFETS NQSYPV L
Subjt:  LNFETSANQSYPVVL

A0A3P6DRL5 Uncharacterized protein1.1e-1746.96Show/hide
Query:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA
        MY+G+IGSF +RD+                            F+HVG+RIN RLS  I+VG KE  VF+YK+YF+H R   FF L+GV+GI LYGSN+P 
Subjt:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA

Query:  LNFETSANQSYPVVL
        LN E   NQ+YPV L
Subjt:  LNFETSANQSYPVVL

A0A6B9QIA5 NADH-plastoquinone oxidoreductase subunit 49.6e-1966.23Show/hide
Query:  NLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPALNFETSANQSYPVVL
        + T FYHVGVRIN  L TSI+VGRKE  V +YKV FVH  G   F LMGV+G+G YGSN+  L+FETSANQSYPV L
Subjt:  NLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPALNFETSANQSYPVVL

A0A7L8HZ51 NADH-plastoquinone oxidoreductase subunit 46.2e-1850.43Show/hide
Query:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA
        MY+G+IG F +RDLLLF                         FYHVGVRIN  L T I+VGRKE  V  YKVYFVH  G  F      +G+GLYGSN+P 
Subjt:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA

Query:  LNFETSANQSYPVVL
        L+FE  ANQSYPV L
Subjt:  LNFETSANQSYPVVL

G7JFZ4 NAD(P)H-quinone oxidoreductase chain 43.5e-1340.87Show/hide
Query:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA
        MY+G+IG F +RD+                          T F+HVG+ IN RL T  +VG K+  +++   + ++  G   F LMG++GIGLYGSN+P 
Subjt:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA

Query:  LNFETSANQSYPVVL
        LNFET  NQSYPV L
Subjt:  LNFETSANQSYPVVL

SwissProt top hitse value%identityAlignment
B2LMP8 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic1.3e-1240.87Show/hide
Query:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA
        MY+G+IGSF +RDLLLF I+                 + L   Y         L  S+  G+K +  ++   + ++  G   F LMGV+G+GLYGSN+P 
Subjt:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA

Query:  LNFETSANQSYPVVL
        LNFETS NQSYPV L
Subjt:  LNFETSANQSYPVVL

Q09FZ6 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic7.6e-1341.74Show/hide
Query:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA
        MY+G+IGSF +RDLLLF I+                 + L   Y         L  S+  G+K +  ++   + ++  G   F LMGV+G+GLYGSN+P 
Subjt:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA

Query:  LNFETSANQSYPVVL
        LNFETSANQSYPV L
Subjt:  LNFETSANQSYPVVL

Q0ZIW8 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic7.6e-1341.74Show/hide
Query:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA
        MY+G+IGSF +RDLLLF I+                 + L   Y         L  S+  G+K +  ++   + ++  G   F L+GV+GIGLYGSN+P 
Subjt:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA

Query:  LNFETSANQSYPVVL
        LNFETSANQSYPV L
Subjt:  LNFETSANQSYPVVL

Q1KXQ3 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic1.3e-1240.87Show/hide
Query:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA
        MY+G+IGSF +RDLLLF I+                 + L   Y         L  S+  G+K +  ++   + ++  G   F LMGV+G+GLYGSN+P 
Subjt:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA

Query:  LNFETSANQSYPVVL
        LNFETS NQSYPV L
Subjt:  LNFETSANQSYPVVL

Q4VZL8 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic2.6e-1341.74Show/hide
Query:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA
        MY+G+IGSF ARDLLLF I+               E   + ++          L  S+  G+K +  ++   + ++  G   F LMGV+GIGLYGSN+P 
Subjt:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA

Query:  LNFETSANQSYPVVL
        LNFETSANQSYP+ L
Subjt:  LNFETSANQSYPVVL

Arabidopsis top hitse value%identityAlignment
ATCG01050.1 NADH-Ubiquinone/plastoquinone (complex I) protein4.3e-1138.26Show/hide
Query:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA
        MY+G+IGSF +RDLLLF I+                 + L   Y         L  S+  G+K +  ++   + ++  GS  F L+GV+GI LYGSN+P 
Subjt:  MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPA

Query:  LNFETSANQSYPVVL
        LN E  AN+SYPV L
Subjt:  LNFETSANQSYPVVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAACGGTCGAATAGGATCATTTTTTGCTCGAGACCTTTTACTATTTATCATTATTAGAATTAATTCCCGTATATCTACTTCTATCGATGTGAGGAGGAAAGAAAC
CGTTAACCTTACTATTTTTTATCATGTGGGAGTTAGAATTAATTGTCGTTTATCTACTTCTATCAATGTGGGGAGGAAAGAAATGGTTGTATTCAACTACAAAGTTTATT
TTGTACACCCGAGAGGTTCTATTTTTTTTTCGTTGATGGGAGTTATGGGTATCGGTTTATATGGTTCTAACAAACCAGCTTTGAATTTTGAAACATCGGCTAATCAGTCT
TATCCTGTAGTGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATAACGGTCGAATAGGATCATTTTTTGCTCGAGACCTTTTACTATTTATCATTATTAGAATTAATTCCCGTATATCTACTTCTATCGATGTGAGGAGGAAAGAAAC
CGTTAACCTTACTATTTTTTATCATGTGGGAGTTAGAATTAATTGTCGTTTATCTACTTCTATCAATGTGGGGAGGAAAGAAATGGTTGTATTCAACTACAAAGTTTATT
TTGTACACCCGAGAGGTTCTATTTTTTTTTCGTTGATGGGAGTTATGGGTATCGGTTTATATGGTTCTAACAAACCAGCTTTGAATTTTGAAACATCGGCTAATCAGTCT
TATCCTGTAGTGTTGTAA
Protein sequenceShow/hide protein sequence
MYNGRIGSFFARDLLLFIIIRINSRISTSIDVRRKETVNLTIFYHVGVRINCRLSTSINVGRKEMVVFNYKVYFVHPRGSIFFSLMGVMGIGLYGSNKPALNFETSANQS
YPVVL