CuGenDBv2

Gene ID	CmoCh09G009830
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Cytochrome c oxidase subunit 2
Genome location	Cmo_Chr09:5218380..5220635
RNA-Seq Expression	CmoCh09G009830
Synteny	CmoCh09G009830
Gene Ontology terms	GO:0022900 - electron transport chain (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0070469 - respirasome (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0005507 - copper ion binding (molecular function)
InterPro domains	IPR002429 - Cytochrome c oxidase subunit II-like C-terminal IPR008972 - Cupredoxin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAE5978911.1 unnamed protein product [Arabidopsis arenosa]

2.5e-23

78.38

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ
        VPS GVKCD VP RLNQISILVQ E VY+ QC+EICGTNHAFT   GNIG+LL+ LWLSRTT GASH RSKLLQ
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ

GEZ07046.1 cytochrome oxidase subunit 2, mitochondrial [Tanacetum cinerariifolium]

2.3e-24

79.73

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ
        VPS GVKCDDVP RLNQISI VQ ERVY+SQC+EICGTNHAF    G IG+LL+ LWLSRTTLGASH RSKLLQ
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ

VDD24165.1 unnamed protein product [Brassica rapa]

4.3e-23

78.38

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ
        VPS GVKCD VP RLNQISILVQ E VY+ QC+EICGTNHAFT   GNIG+LL+ LWLSRTT GASH RSKLLQ
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ

WP_165490465.1 cytochrome c oxidase subunit II, partial [Frankia symbiont of Coriaria myrtifolia]

2.5e-23

78.38

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ
        VPS GVKCD VP RLNQISILVQ E VY+ QC+EICGTNHAFT   GNIG+LL+ LWLSRTT GASH RSKLLQ
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ

YP_009504873.1 Cox2 [Senna occidentalis]

1.1e-23

78.38

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ
        VPSLGVKCD VP RLNQISILVQ E VY+ QC+EICGTNHAFT   GNIG+LL+ LWLSRTT GASH +SKLLQ
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ

TrEMBL top hits

e value

%identity

Alignment

A0A2Z4HGM3 Cytochrome c oxidase subunit 2

2.7e-23

77.03

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ
        VPSLGVKCD VP RLNQISI VQ E VY+ QC+EICGTNHAFT   GNIG+LL+ LWLSRTT GASH +SKLLQ
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ

A0A2Z4HH89 Cytochrome c oxidase subunit 2

5.5e-24

78.38

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ
        VPSLGVKCD VP RLNQISILVQ E VY+ QC+EICGTNHAFT   GNIG+LL+ LWLSRTT GASH +SKLLQ
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ

A0A385I1U0 Cytochrome c oxidase subunit 2

2.7e-23

77.03

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ
        VPSLGVKCD VP RLNQISI VQ E VY+ QC+EICGTNHAFT   GNIG+LL+ LWLSRTT GASH +SKLLQ
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ

A0A3P6DPU5 Cytochrome c oxidase subunit 2

2.1e-23

78.38

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ
        VPS GVKCD VP RLNQISILVQ E VY+ QC+EICGTNHAFT   GNIG+LL+ LWLSRTT GASH RSKLLQ
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ

A0A7L9QAD9 Cytochrome c oxidase subunit 2

4.7e-23

77.03

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ
        VPS GVKCD VP RLNQ SILVQ E VY+ QC+EICGTNHAFT   GNIG+LL+ LWLSRTT GASH RSKLLQ
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQ

SwissProt top hits

e value

%identity

Alignment

P05490 Cytochrome c oxidase subunit 2

1.5e-13

80.95

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAF
        VPSLGVKCD VP RLNQIS+LVQ E VY+ QC+EICGTNHAF
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAF

P05491 Cytochrome c oxidase subunit 2

6.5e-14

76.09

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVL
        VPSLGVKCD VP RLNQISI VQ E VY+ QC+EICGTNHAFT ++
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVL

P08744 Cytochrome c oxidase subunit 2

1.5e-13

76.09

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVL
        VPSLGVKCD VP RLNQISI VQ E VY+ QC+EICGTNHAF  V+
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVL

P27168 Cytochrome c oxidase subunit 2

3.2e-13

73.91

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVL
        VPS GVKCD VP RLNQISI VQ E VY+ QC+EICGTNHAFT ++
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVL

P93285 Cytochrome c oxidase subunit 2

3.8e-14

76.09

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVL
        VPSLGVKCD VP RLNQISILVQ E VY+ QC+EICGTNHAF  ++
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVL

Arabidopsis top hits

e value

%identity

Alignment

ATMG00160.1 cytochrome oxidase 2

2.7e-15

76.09

Show/hide

Query:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVL
        VPS GVKCD VP RLNQISILVQ E VY+ QC+EICGTNHAFT ++
Subjt:  VPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGGGTGTACCTTCATTAGGCGTCAAATGTGATGATGTACCTAATCGTTTAAATCAGATCTCTATTTTGGTACAATGGGAAAGAGTTTACCATAGTCAGTGCACTGA
GATTTGTGGAACTAATCATGCCTTTACATGTGTGCTCGGAAACATAGGCCAATTGCTAAATTCACTCTGGCTCAGCCGCACCACCCTAGGTGCGAGCCACGTGAGAAGCA
AGCTATTACAGCTAGTCAGCTATTTATGTTTCTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLGVPSLGVKCDDVPNRLNQISILVQWERVYHSQCTEICGTNHAFTCVLGNIGQLLNSLWLSRTTLGASHVRSKLLQLVSYLCF

CmoCh09G009830 (gene) of Cucurbita moschata (Rifu) v1 genome