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CmoCh09G009920 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G009920
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATMRP3
Genome locationCmo_Chr09:5266622..5270665
RNA-Seq ExpressionCmoCh09G009920
SyntenyCmoCh09G009920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024953.1 hypothetical protein SDJN02_13773, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-5599.17Show/hide
Query:  SLKIEPGSMTPTGIDTKKIKDEANVIEDNKSRRKQSHSIAAAVWNLGREFQVTSSRASMNINSLTLLRILPLGVESKNDMGARKMLVCILTKSSVAALKP
        SLKIEPGSMTPTGIDTKKIKDEANVIEDNKSRRKQSHSIAAAVWNLGREFQVTSSRASMNINSLTLLRILPLGVESKNDMGARKMLVCILTKSSVAALKP
Subjt:  SLKIEPGSMTPTGIDTKKIKDEANVIEDNKSRRKQSHSIAAAVWNLGREFQVTSSRASMNINSLTLLRILPLGVESKNDMGARKMLVCILTKSSVAALKP

Query:  AVTRRADLKKTHKELPMAKAT
        AVTRRADLKKT+KELPMAKAT
Subjt:  AVTRRADLKKTHKELPMAKAT
TrEMBL top hitse value%identityAlignment
A0A0A9G679 Uncharacterized protein4.5e-0558.82Show/hide
Query:  PLGVESKNDMGARKMLVCILTKSSVAALKPAVTRRADLKKTHKELPMAKAT
        PLGVESK D+GA  M +CIL  + VA L  AVTR + L +TH ELP A AT
Subjt:  PLGVESKNDMGARKMLVCILTKSSVAALKPAVTRRADLKKTHKELPMAKAT
A0A0A9ITV8 ATMRP37.7e-0558.82Show/hide
Query:  PLGVESKNDMGARKMLVCILTKSSVAALKPAVTRRADLKKTHKELPMAKAT
        PLGVESK D+GA  M +CIL  + VA L  AVTR + L +TH ELP A AT
Subjt:  PLGVESKNDMGARKMLVCILTKSSVAALKPAVTRRADLKKTHKELPMAKAT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAACCCACCAATTTTGCCTCGCGGTTGTGAAGTTCAACTTCTCCGAACGTTGGCCAGCTACTATCCGAACAGCTTGAAAATTGAACCTGGATCAATGACT
CCCACAGGGATAGATACCAAGAAAATCAAAGACGAGGCGAATGTGATCGAAGACAATAAATCGAGACGGAAGCAGAGCCATTCCATTGCTGCAGCTGTGTGGAAC
TTGGGTCGAGAGTTTCAAGTGACTAGTTCAAGAGCATCCATGAATATAAATTCACTCACTCTATTGAGGATTCTTCCACTCGGAGTAGAATCGAAGAACGACATG
GGAGCCCGAAAGATGCTCGTGTGCATTTTAACGAAGAGTTCAGTTGCTGCTTTAAAACCAGCCGTCACAAGAAGGGCTGATCTCAAGAAGACACACAAAGAGCTT
CCAATGGCCAAAGCAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCAACCCACCAATTTTGCCTCGCGGTTGTGAAGTTCAACTTCTCCGAACGTTGGCCAGCTACTATCCGAACAGCTTGAAAATTGAACCTGGATCAATGACT
CCCACAGGGATAGATACCAAGAAAATCAAAGACGAGGCGAATGTGATCGAAGACAATAAATCGAGACGGAAGCAGAGCCATTCCATTGCTGCAGCTGTGTGGAAC
TTGGGTCGAGAGTTTCAAGTGACTAGTTCAAGAGCATCCATGAATATAAATTCACTCACTCTATTGAGGATTCTTCCACTCGGAGTAGAATCGAAGAACGACATG
GGAGCCCGAAAGATGCTCGTGTGCATTTTAACGAAGAGTTCAGTTGCTGCTTTAAAACCAGCCGTCACAAGAAGGGCTGATCTCAAGAAGACACACAAAGAGCTT
CCAATGGCCAAAGCAACATAGACGATAATCAATCGAGAGGTCGAAACAGGAGGCTCCATATCATCTGAAACAGGAGTAGCCCATGCCATCCAGTAATTACTTCCA
ATTTGGAGAATCTGAAAGAGAACCTGAGCAAGCAATATAATAGGCACAAGAGCTCCACCATAAGCATACTTGATTTTCCAGAAGCATCTCCTTCCACAGAATTAA
TGGTGGATAATGCTTCCTCGTGTGCGCCAACGAGTGTCATAAAGTCGGTTCCAGAACGAAGAATTTCATCGTACTTTCCAGATTGAACAATTTTTCCATCTTTCA
TGACCTGATAGTAAAGAATCTCCTAAGTTCAGATGTAAAAGAACAAGGAGCATGACTAAAAACAGAGATAGAAGTCCTCTACTTACCAAGATAAGATCTGCAGCT
GGTAAAAATTCTACTTGATGAGTGACATAAATGACTGTTTTTGAATTCAGAACACCAAGGAGACATTCCTGTCAGGATAATTCAAGCAGGATTATTGTAATGTGA
GACCATAGCAGTAGGAGAGGGTTGCAAAATATTCTTTATAAG
Protein sequenceShow/hide protein sequence
MFNPPILPRGCEVQLLRTLASYYPNSLKIEPGSMTPTGIDTKKIKDEANVIEDNKSRRKQSHSIAAAVWNLGREFQVTSSRASMNINSLTLLRILPLGVESKNDM
GARKMLVCILTKSSVAALKPAVTRRADLKKTHKELPMAKAT