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CmoCh09G010160 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G010160
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNAD-dependent protein deacetylase SRT1
Genome locationCmo_Chr09:5408821..5411123
RNA-Seq ExpressionCmoCh09G010160
SyntenyCmoCh09G010160
Gene Ontology termsGO:0000122 - negative regulation of transcription by RNA polymerase II (biological process)
GO:0070932 - histone H3 deacetylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
GO:0004407 - histone deacetylase activity (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0070403 - NAD+ binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592099.1 NAD-dependent protein deacetylase SRT1, partial [Cucurbita argyrosperma subsp. sororia]3.9e-1297.56Show/hide
Query:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
        +REGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
Subjt:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
XP_022936499.1 NAD-dependent protein deacetylase SRT1 isoform X2 [Cucurbita moschata]3.9e-1297.56Show/hide
Query:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
        +REGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
Subjt:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
XP_023536490.1 NAD-dependent protein deacetylase SRT1 isoform X1 [Cucurbita pepo subsp. pepo]3.9e-1297.56Show/hide
Query:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
        +REGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
Subjt:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
XP_031744754.1 uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus]3.9e-1275Show/hide
Query:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGANKKLQDHLGEDVR
        +REGKALPEASLPFHRA+PS+THMALVELEKAGILKFIISQ    +L +   ED R
Subjt:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGANKKLQDHLGEDVR
XP_031744760.1 uncharacterized protein LOC101212255 isoform X8 [Cucumis sativus]3.9e-1275Show/hide
Query:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGANKKLQDHLGEDVR
        +REGKALPEASLPFHRA+PS+THMALVELEKAGILKFIISQ    +L +   ED R
Subjt:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGANKKLQDHLGEDVR
TrEMBL top hitse value%identityAlignment
A0A072UXC4 NAD-dependent protein deacetylase SRT24.2e-1286.36Show/hide
Query:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGAN
        +REGKALPEASLPFHRAVPS+THMALVELEKAGILKF+ISQ  +
Subjt:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGAN
A0A2K3PKH9 NAD-dependent protein deacetylase SRT2 (Fragment)4.2e-1286.36Show/hide
Query:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGAN
        +REGKALPEASLPFHRAVPS+THMALVELEKAGILKF+ISQ  +
Subjt:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGAN
A0A2Z6P706 Deacetylase sirtuin-type domain-containing protein (Fragment)4.2e-1286.36Show/hide
Query:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGAN
        +REGKALPEASLPFHRAVPS+THMALVELEKAGILKF+ISQ  +
Subjt:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGAN
A0A6J1F8G8 NAD-dependent protein deacetylase SRT1 isoform X21.9e-1297.56Show/hide
Query:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
        +REGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
Subjt:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
A0A6J1FDE4 NAD-dependent protein deacetylase SRT1 isoform X11.9e-1297.56Show/hide
Query:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
        +REGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
Subjt:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQ
SwissProt top hitse value%identityAlignment
B8ARK7 NAD-dependent protein deacetylase SRT15.9e-1163.27Show/hide
Query:  IYQMHEREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGAN
        ++ +  R GK +P ASLPFHRAVP++THMALVELEK G LKF+ISQ  +
Subjt:  IYQMHEREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGAN
Q9FE17 NAD-dependent protein deacetylase SRT13.7e-1379.55Show/hide
Query:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGAN
        +REGK LP+ASLPFHRA+PSMTHMALVELE+AGILKF+ISQ  +
Subjt:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGAN
Arabidopsis top hitse value%identityAlignment
AT5G55760.1 sirtuin 12.6e-1479.55Show/hide
Query:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGAN
        +REGK LP+ASLPFHRA+PSMTHMALVELE+AGILKF+ISQ  +
Subjt:  EREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGAN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATCAAGTTGATATTTTCTAATGTCCATTGGTACTACATCTATCAAATGCATGAACGTGAAGGTAAAGCCTTACCAGAAGCATCACTACCGTTTCATCGTGCAGT
GCCGAGCATGACTCATATGGCTTTGGTTGAATTAGAGAAGGCTGGTATATTGAAGTTCATCATTAGTCAGGGAGCTAACAAAAAGCTTCAGGATCACTTAGGCGAAGACG
TTAGAGAAATAGCCGCAGACAACTTTGTAAAACCTCCAAGACGAAGACCTTGCTATCAATCCACAAGAAAAGCAACCCTCCGGATCGAACAAGTGGTACCGCGAAGCCCA
AAAGATGACTTTGGAACTTGTTTCTTGAAAGCACAGCACCATGTCAGGGCACTGGAGAAGAGGGGGAAAAAACCCTTCAGATTAATGCTATTAGAACAGACTCGTAGACC
TCTAATACTCCAAGATTATCGGGATACAAGATGGACAAAGAGCCTACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATCAAGTTGATATTTTCTAATGTCCATTGGTACTACATCTATCAAATGCATGAACGTGAAGGTAAAGCCTTACCAGAAGCATCACTACCGTTTCATCGTGCAGT
GCCGAGCATGACTCATATGGCTTTGGTTGAATTAGAGAAGGCTGGTATATTGAAGTTCATCATTAGTCAGGGAGCTAACAAAAAGCTTCAGGATCACTTAGGCGAAGACG
TTAGAGAAATAGCCGCAGACAACTTTGTAAAACCTCCAAGACGAAGACCTTGCTATCAATCCACAAGAAAAGCAACCCTCCGGATCGAACAAGTGGTACCGCGAAGCCCA
AAAGATGACTTTGGAACTTGTTTCTTGAAAGCACAGCACCATGTCAGGGCACTGGAGAAGAGGGGGAAAAAACCCTTCAGATTAATGCTATTAGAACAGACTCGTAGACC
TCTAATACTCCAAGATTATCGGGATACAAGATGGACAAAGAGCCTACTGTGA
Protein sequenceShow/hide protein sequence
MKIKLIFSNVHWYYIYQMHEREGKALPEASLPFHRAVPSMTHMALVELEKAGILKFIISQGANKKLQDHLGEDVREIAADNFVKPPRRRPCYQSTRKATLRIEQVVPRSP
KDDFGTCFLKAQHHVRALEKRGKKPFRLMLLEQTRRPLILQDYRDTRWTKSLL