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CmoCh09G010190 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G010190
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationCmo_Chr09:5434190..5436133
RNA-Seq ExpressionCmoCh09G010190
SyntenyCmoCh09G010190
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030269.1 RPM1-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma]8.2e-39100Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYIHNPFSFVLLNGGYS
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYIHNPFSFVLLNGGYS
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYIHNPFSFVLLNGGYS
KAG7037321.1 RPM1-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma]6.5e-2893.94Show/hide
Query:  VGDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRY
        + DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR GA+PAKAPPVRY
Subjt:  VGDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRY
XP_008463014.1 PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo]3.1e-3086.84Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYIHNPFSFVLLNG
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR+  DPAKAPPVRYIHN F    L+G
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYIHNPFSFVLLNG
XP_022975420.1 uncharacterized protein LOC111474733 isoform X1 [Cucurbita maxima]2.9e-2884.42Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRY---IHNPFSFVLL
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPP ++   I + F F+ L
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRY---IHNPFSFVLL
XP_023535777.1 uncharacterized protein LOC111797108 isoform X1 [Cucurbita pepo subsp. pepo]2.9e-2884.42Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRY---IHNPFSFVLL
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPP ++   I + F F+ L
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRY---IHNPFSFVLL
TrEMBL top hitse value%identityAlignment
A0A1S3CI83 RPM1-interacting protein 4-like isoform X11.5e-3086.84Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYIHNPFSFVLLNG
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR+  DPAKAPPVRYIHN F    L+G
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYIHNPFSFVLLNG
A0A6J1FE40 uncharacterized protein LOC1114432507.1e-2893.85Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYI
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPP +++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYI
A0A6J1ID15 uncharacterized protein LOC111474733 isoform X27.1e-2893.85Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYI
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPP +++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYI
A0A6J1IGN4 uncharacterized protein LOC111474733 isoform X11.4e-2884.42Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRY---IHNPFSFVLL
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPP ++   I + F F+ L
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRY---IHNPFSFVLL
A0A6J1J2H2 RPM1-interacting protein 4-like6.0e-2788.06Show/hide
Query:  VGDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYI
        + DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR GA+PAKAPP +++
Subjt:  VGDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYI
SwissProt top hitse value%identityAlignment
O22633 Protein NOI46.2e-2170Show/hide
Query:  VGDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPVRYI
        + DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G     G DP+K  P +++
Subjt:  VGDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPVRYI
Q8GYN5 RPM1-interacting protein 45.6e-0654.05Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTG
        +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTG
Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein5.9e-1987.23Show/hide
Query:  VGDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK
        + DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK
Subjt:  VGDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK
AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein3.4e-2273.53Show/hide
Query:  VGDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPVR
        + DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G     G DP+K  PV+
Subjt:  VGDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPVR
AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein4.4e-2275.76Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPVR
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G     G DP+K  PV+
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPVR
AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein5.7e-2272.06Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPVRYI
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G     G DP+K  P +++
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---SGADPAKAPPVRYI
AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein1.8e-1271.74Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKT----GGKPDS
        +KG+PLPKFGEWDVN+P SAEGFTVIF+KA DEKKT    G  P+S
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKT----GGKPDS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAATCCTGACAGCTGCATTCAAATATGTGACGTAGTTGGAGACAAAGGTCGGCCATTGCCAAAGTTTGGTGAGTGGGATGTTAATGATCCGACATCAGCGGAGGG
GTTCACCGTGATTTTTAACAAAGCTAGGGATGAGAAGAAAACAGGCGGCAAGCCTGATTCACCTGGAAAAGTTGATGCACAGGGCAGGTCTGGAGCGGATCCTGCCAAGG
CACCGCCTGTGAGATACATTCATAATCCTTTTTCTTTTGTGCTATTGAATGGTGGTTATAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATAATCCTGACAGCTGCATTCAAATATGTGACGTAGTTGGAGACAAAGGTCGGCCATTGCCAAAGTTTGGTGAGTGGGATGTTAATGATCCGACATCAGCGGAGGG
GTTCACCGTGATTTTTAACAAAGCTAGGGATGAGAAGAAAACAGGCGGCAAGCCTGATTCACCTGGAAAAGTTGATGCACAGGGCAGGTCTGGAGCGGATCCTGCCAAGG
CACCGCCTGTGAGATACATTCATAATCCTTTTTCTTTTGTGCTATTGAATGGTGGTTATAGCTAGCATCTCTATTGATATTAAAGTAGCTGGCATCTAAATAGTCCTTCT
TTTGCATCTTTGGACAATTGTTTGGTTTATTACTGTCAATGAATTTCTGAGAGTGTTGCTTCTGATAGTGTGGGTGTGTATATATATATGTGCATATATCTGGGTTGAGC
TCTGTTCAAACTCTTGGGAAGTATCTTAATTTGGAATTAAAACGTGCTGGTTAAGTACCTAGAATTAAGCTTTAAGAAGAGATGAAACATGATATCACACCATTTAATGT
AACAAAATTTGAATCTCTTTGATTTTATATACCTTGTTAAGTACTTTATGTTCATGAAACATGAATTTCCTAGTTTTGTTTATCTTTGAGAGGGCTCTGGTTCTTGTTGC
ATAAATGTAGGCGGGTCGAATGTAATGACTTGATCTCAGTTCTTGTTGCATAAATGATTAATCTGCAATGTTACCTTACATATTGTATTTACAAGTTTTATTTGGCCTTT
TTTGCCCCCTCGTGTGGATGATTATCAGAAGAAATGGCTTTGCTGTATCCAAAGTCCCCCTGCTGAATCTTGAGAAGGATTCGTTTAGAAGCCTTGGTTGAAAAACAATA
TTATTCTGTAATTGTGCTACTTTGGCTTCTCAAAGACGATGAACTTTTCATGGAGCCCTGATGTTCCTGCTAAATTTTATGCAATTTCATGTAAAGCTGAGTGTTATTGT
TGTGGAGGAAAAAGTAAAGAAGACAAACATGTATTATATTTATATGATTGATATGGTGGTTTTTTATTATAGGATACAGTTGCTATTCTGTCTTTGCCTTTGGTGTGAGC
TGTAAAGCTTTGCACTAGACATGATGTATAATTGTGGCTGGTATAATTAATGTATTACAACCTTTTCTTTTCTTGGAAGACAGCCTTTCCCATAACATAAATATTTACTC
GACAGGGAAGATTTGAACCTACGACCCACCAAGAAAAGACATTTGATGTCTGGTTTAGTTCTCCCATAACACACAAACTACACAAACTTATAGAGGCTTTTCCCCCGACT
CTTCAATTCTAGTATGGCTCTGATTTTGCACTTCTTTCCTCTGTAGTACCTCGACGTGACATGAGCGTCCAATGGGTTCTCAAGAATCTATTTTCCTTTCTTATATAAGG
GAGACCGCAATTGGAAAAAGAGGATGAACGGGGAGGAATAACCAATCGATGAAGGAACATGAAACCATTTTGTTTCAATAGAGGTACGAGAAAGGATTGGGGGCAATGAA
GTAGGTGAAGTGGTTATGACTGCTGCTAAGCAGTGCAAAAGCTAAGGAGACTTTGATGGTAGCTAATTGAAGACTGAACATAAGTAGGCGGTGTTCGTAAACATGTTAAA
GGGCTCCCGTCTTTGGCGGGTCACCTTTCCAAGACTGAGAAAGGCGAACATTTGGGCAAGTAAGTAGGAGGTCTTCGTAAACATGTTAAAGGGCTC
Protein sequenceShow/hide protein sequence
MNNPDSCIQICDVVGDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAPPVRYIHNPFSFVLLNGGYS