| GenBank top hits | e value | %identity | Alignment |
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| KAG6592199.1 hypothetical protein SDJN03_14545, partial [Cucurbita argyrosperma subsp. sororia] | 4.6e-76 | 100 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| XP_022926288.1 sm-like protein LSM4 isoform X1 [Cucurbita moschata] | 6.2e-73 | 95.97 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
GREDGPGGRP+KGMGRGFDDGAKAASGGRGKG GGK GANRVGGRGRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| XP_022936003.1 sm-like protein LSM4 [Cucurbita moschata] | 4.6e-76 | 100 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| XP_022975088.1 sm-like protein LSM4 isoform X1 [Cucurbita maxima] | 8.7e-75 | 98.66 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
GREDGPGGRPSKGMGRGFDDGAKAASGGRGKG SGGK GANRVGGRGRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| XP_023535667.1 sm-like protein LSM4 [Cucurbita pepo subsp. pepo] | 1.3e-75 | 99.33 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
GREDGPGGRPSKGMGRGFDDGAKAASGGRGKG SGGKLGANRVGGRGRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 1.9e-72 | 95.97 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
GREDGPGGRP+KGMGRGFDDGAKAASGGRGKG GGK GANRVGGRGRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| A0A6J1EHL8 U6 snRNA-associated Sm-like protein LSm4 | 3.0e-73 | 95.97 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
GREDGPGGRP+KGMGRGFDDGAKAASGGRGKG GGK GANRVGGRGRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| A0A6J1FCD9 U6 snRNA-associated Sm-like protein LSm4 | 2.2e-76 | 100 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| A0A6J1ID83 U6 snRNA-associated Sm-like protein LSm4 | 4.2e-75 | 98.66 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
GREDGPGGRPSKGMGRGFDDGAKAASGGRGKG SGGK GANRVGGRGRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| A0A6J1J2N4 U6 snRNA-associated Sm-like protein LSm4 | 3.0e-73 | 95.97 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
GREDGPGGRP+KGMGRGFDDGAKAASGGRGKG GGK GANRVGGRGRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 3.2e-56 | 79.19 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+RTDRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
G +DG GA+ GRG+G+S GK+G NR GRGRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.5e-58 | 82 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE KSRTDRKPPGVGR R R
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: -GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
GR+D GR KG+GRG DDG + GRGKG K G R GGRGRG
Subjt: -GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 5.9e-58 | 82.12 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRTDRKPPGVGRGRG
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECYIRGNTIKYLRVPDEVIDKVQEET KSR+DR+PPGVGRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRTDRKPPGVGRGRG
Query: RGR-EDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
RG PGGR G+GRG DDG GGRG+G GGK G + GGRGRG
Subjt: RGR-EDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| Q9QXA5 U6 snRNA-associated Sm-like protein LSm4 | 1.8e-38 | 61.74 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EE +GRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
G GP + KG G GG G+G GG+ G + G GRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.3e-57 | 81.33 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRG-FDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
GRE+G G R +G GR AKA RG+G+S GK G GGRGRG
Subjt: GREDGPGGRPSKGMGRG-FDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 1.9e-11 | 33.58 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRTDRKPPGVGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +IRG+ ++++ +PD + ++ K ++ GVGR
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRTDRKPPGVGR
Query: GRGRGREDGPGGRPSKGMGRGFDDGAKAASGGRG
GRG R G+P+ G GRG +GGRG
Subjt: GRGRGREDGPGGRPSKGMGRGFDDGAKAASGGRG
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| AT1G76300.1 snRNP core protein SMD3 | 8.0e-10 | 31.54 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRTDRKPPGVGRGRGR
+P+ LL + GH + VE+K+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ +++L +PD + + + ++ + + GVGRGRG
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRG
+KG GRG GGRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRG
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 5.7e-08 | 40.59 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE-------VIDKVQEETKSRTDRK-PPGVGRGRGRGREDGPGG
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD V D + + K T K P G GRGRGRGR G GG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE-------VIDKVQEETKSRTDRK-PPGVGRGRGRGREDGPGG
Query: R
R
Subjt: R
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 1.2e-05 | 36.94 | Show/hide |
Query: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE-------VIDKVQEETKSRTDRK-PPGVGRGR
+ELKNG +G + + D MN HL+ V T K G + +RGN I+Y +PD V D + + K T K P G GRGR
Subjt: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDE-------VIDKVQEETKSRTDRK-PPGVGRGR
Query: GRGREDGPGGR
GRGR G GGR
Subjt: GRGREDGPGGR
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 2.3e-57 | 79.19 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+RTDRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGR
Query: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
G +DG GA+ GRG+G+S GK+G NR GRGRG
Subjt: GREDGPGGRPSKGMGRGFDDGAKAASGGRGKGSSGGKLGANRVGGRGRG
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