; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G011480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G011480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description40S ribosomal protein S4
Genome locationCmo_Chr09:7155164..7158481
RNA-Seq ExpressionCmoCh09G011480
SyntenyCmoCh09G011480
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000876 - Ribosomal protein S4e
IPR002942 - RNA-binding S4 domain
IPR005824 - KOW
IPR013843 - Ribosomal protein S4e, N-terminal
IPR013845 - Ribosomal protein S4e, central region
IPR014722 - Ribosomal protein L2, domain 2
IPR018199 - Ribosomal protein S4e, N-terminal, conserved site
IPR032277 - 40S ribosomal protein S4, C-terminal domain
IPR036986 - RNA-binding S4 domain superfamily
IPR038237 - Ribosomal protein S4e, central domain superfamily
IPR041982 - Ribosomal protein S4, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600664.1 putative DEAD-box ATP-dependent RNA helicase 29, partial [Cucurbita argyrosperma subsp. sororia]7.5e-14697.35Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAK+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL++NKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA
        HKGSFETIHVQDATGHEFATRLCNVFT+GKGTKPW+SLPKGKGIKLSIIEEARKRLASQA+VTA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA

XP_022932544.1 40S ribosomal protein S4-3-like [Cucurbita moschata]3.6e-148100Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA
        HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA

XP_022942860.1 40S ribosomal protein S4-3-like [Cucurbita moschata]7.5e-14697.35Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAK+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL++NKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA
        HKGSFETIHVQDATGHEFATRLCNVFT+GKGTKPW+SLPKGKGIKLSIIEEARKRLASQA+VTA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA

XP_022976936.1 40S ribosomal protein S4-3-like [Cucurbita maxima]8.0e-14899.62Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA
        HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQA+VTA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA

XP_023551057.1 40S ribosomal protein S4-3-like [Cucurbita pepo subsp. pepo]5.7e-14697.73Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAK+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL++NKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA
        HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPW+SLPKGKGIKLSIIEEARKRLASQA+VTA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA

TrEMBL top hitse value%identityAlignment
A0A6J1EXA2 40S ribosomal protein S41.7e-148100Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA
        HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA

A0A6J1FX18 40S ribosomal protein S43.6e-14697.35Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAK+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL++NKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA
        HKGSFETIHVQDATGHEFATRLCNVFT+GKGTKPW+SLPKGKGIKLSIIEEARKRLASQA+VTA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA

A0A6J1II98 40S ribosomal protein S43.9e-14899.62Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA
        HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQA+VTA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA

A0A6J1JJJ9 40S ribosomal protein S43.6e-14697.35Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAK+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL++NKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA
        HKGSFETIHVQDATGHEFATRLCNVFT+GKGTKPW+SLPKGKGIKLSIIEEARKRLASQA+VTA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA

A0A6J1K8I3 40S ribosomal protein S46.2e-14696.97Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS+RDEE+KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA
        HKGSFETIHVQDATGHEFATRLCNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQ + TA
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA

SwissProt top hitse value%identityAlignment
P46299 40S ribosomal protein S47.0e-13992.66Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHV+VDGKVRTDKT+PAGFMDVVSIPKTNE+FR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRF LH++  +E KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ
        HKGSFETIHVQDA GHEFATRL NVFT+GKGTKPWVSLPK KGIKLSIIEEARKRLA+Q
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ

P46300 40S ribosomal protein S42.6e-14191.29Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYREVISILMQR V+VDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS+RDEE+KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA
        HKGSFET+H+QD+ GHEFATRL NVFT+GKGTKPWVSLPKGKGIKL+IIE+ARKRLA+Q++  A
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA

P49204 40S ribosomal protein S4-21.5e-14192.66Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ
        HKGSFETIH+QD+TGHEFATRL NV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ

Q8VYK6 40S ribosomal protein S4-31.2e-14192.66Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ
        HKGSFETIH+QD+TGHEFATRL NV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ

Q93VH9 40S ribosomal protein S4-17.5e-14191.89Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ
        HKGSFETIH+QD+TGHEFATRL NV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRL++Q
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ

Arabidopsis top hitse value%identityAlignment
AT2G17360.1 Ribosomal protein S4 (RPS4A) family protein5.3e-14291.89Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ
        HKGSFETIH+QD+TGHEFATRL NV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRL++Q
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ

AT2G17360.2 Ribosomal protein S4 (RPS4A) family protein5.2e-9791.71Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVG  V
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV

AT5G07090.1 Ribosomal protein S4 (RPS4A) family protein1.1e-14292.66Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ
        HKGSFETIH+QD+TGHEFATRL NV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ

AT5G07090.2 Ribosomal protein S4 (RPS4A) family protein3.2e-13192.12Show/hide
Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEF
        AKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIH+QD+TGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEF

Query:  ATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ
        ATRL NV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ
Subjt:  ATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ

AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein8.2e-14392.66Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ
        HKGSFETIH+QD+TGHEFATRL NV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ
Subjt:  HKGSFETIHVQDATGHEFATRLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGGGATTGAAGAAGCATTTGAAGAGGCTTAACGCCCCAAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGCTCCCAAACCTTCATCTGGACCTCATAA
GTCAAGGGAATGCCTTCCGTTGATCCTTATTTTGAGGAACCGATTGAAATATGCTCTCACATACCGTGAGGTAATTTCAATTTTAATGCAACGACATGTTTTGGTCGATG
GGAAGGTCAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGATGTTGTGTCAATTCCTAAGACAAACGAGAATTTCCGGCTTCTTTATGACACAAAGGGCCGATTCCGC
CTTCACTCAGTCAGAGATGAAGAGGCTAAGTTTAAGCTGTGCAAAGTTCGCTCAGTGCAGTTCGGGCAAAAGGGCATCCCATACCTGAACACTTACGATGGACGTACAAT
CCGTTATCCCGACCCTCTAATCAAGGCGAACGACACCATCAAGCTGGACCTCGACTCCAACAAGATAGCTGATTTCATCAAGTTCGACGTAGGAAACGTTGTGATGGTGA
CTGGTGGAAGAAACAGGGGCAGAGTTGGAGTGATAAAGAACAGGGAGAAGCACAAGGGAAGCTTTGAAACGATCCACGTTCAGGATGCAACCGGGCACGAGTTTGCAACC
CGGCTATGCAATGTGTTCACAGTTGGTAAGGGGACGAAGCCATGGGTGTCTCTTCCCAAGGGCAAGGGTATCAAACTATCCATCATAGAAGAAGCCAGGAAGAGGCTGGC
AAGCCAAGCTTCAGTTACCGCTTAA
mRNA sequenceShow/hide mRNA sequence
CCAGCAAACACTTTCTCTCACTGAAACCCTACTTTCTCCCCCCACAGACGCCGGCGGCGACCCCAGTTTAGCTTCTTCGAGCTTCACTTCGACAATATGGCAAGGGGATT
GAAGAAGCATTTGAAGAGGCTTAACGCCCCAAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGCTCCCAAACCTTCATCTGGACCTCATAAGTCAAGGGAATGCC
TTCCGTTGATCCTTATTTTGAGGAACCGATTGAAATATGCTCTCACATACCGTGAGGTAATTTCAATTTTAATGCAACGACATGTTTTGGTCGATGGGAAGGTCAGGACA
GACAAGACTTTCCCTGCTGGTTTCATGGATGTTGTGTCAATTCCTAAGACAAACGAGAATTTCCGGCTTCTTTATGACACAAAGGGCCGATTCCGCCTTCACTCAGTCAG
AGATGAAGAGGCTAAGTTTAAGCTGTGCAAAGTTCGCTCAGTGCAGTTCGGGCAAAAGGGCATCCCATACCTGAACACTTACGATGGACGTACAATCCGTTATCCCGACC
CTCTAATCAAGGCGAACGACACCATCAAGCTGGACCTCGACTCCAACAAGATAGCTGATTTCATCAAGTTCGACGTAGGAAACGTTGTGATGGTGACTGGTGGAAGAAAC
AGGGGCAGAGTTGGAGTGATAAAGAACAGGGAGAAGCACAAGGGAAGCTTTGAAACGATCCACGTTCAGGATGCAACCGGGCACGAGTTTGCAACCCGGCTATGCAATGT
GTTCACAGTTGGTAAGGGGACGAAGCCATGGGTGTCTCTTCCCAAGGGCAAGGGTATCAAACTATCCATCATAGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCTTCAG
TTACCGCTTAAGAGGAGGTAGGTAGTGTAGTGTAGGCATATGATGATGAAACGTGGGGTTTTGCTCTTGTTATTGCTTTAGTTGATAGATGTGTCTTCCAAAAGGGCTCA
TACTTTGTTATTTCTACTGGAATTGTGCGAGGCTATCATTTTGTCATTCCAAAACTCTTCGCTACAATGGACCTGTCTTTTAGAAGTTTTTCTGGTAAATGGAGAGCAAA
ATTCTCTCTCTCTTGC
Protein sequenceShow/hide protein sequence
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFR
LHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFAT
RLCNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQASVTA