CuGenDBv2

Gene ID	CmoCh09G011710
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF1218)
Genome location	Cmo_Chr09:7845477..7846249
RNA-Seq Expression	CmoCh09G011710
Synteny	CmoCh09G011710
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009606 - Modifying wall lignin-1/2

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022933005.1 uncharacterized protein LOC111439666 [Cucurbita moschata]

2.6e-86

100

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Query:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFSLFKSTSFSIFFNISLFTTGLAITLLVWHT
        MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFSLFKSTSFSIFFNISLFTTGLAITLLVWHT
Subjt:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFSLFKSTSFSIFFNISLFTTGLAITLLVWHT

Query:  VTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
        VTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
Subjt:  VTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA

XP_022933007.1 uncharacterized protein LOC111439668 [Cucurbita moschata]

2.2e-77

87.17

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Query:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFS--------------LFKSTSFSIFFNISL
        MSVKI+SL VATLGVISFIFGVVAENKKPASGT IPGKGIVVCQYP DPTVALGYLS+AFLLASSIAGYFS              LF+STSFSIFFNI+L
Subjt:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFS--------------LFKSTSFSIFFNISL

Query:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
        FTTGLAITLLVW TV EQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDS EALKNNA
Subjt:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA

XP_022937371.1 uncharacterized protein LOC111443679 [Cucurbita moschata]

7.4e-78

86.63

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Query:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFSL--------------FKSTSFSIFFNISL
        +SVKIMSL VATLGVISFIFGVVAENKKPASGTPIPGKGIV+CQYP DPTVALGYLS+AFLLASSIAGYFSL              FKS+SFSIFFNI+L
Subjt:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFSL--------------FKSTSFSIFFNISL

Query:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
        FTTGLAITLLVW TVTEQIHLTRNV+HNLE ACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDS EALKNNA
Subjt:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA

XP_023520594.1 uncharacterized protein LOC111784009 [Cucurbita pepo subsp. pepo]

9.7e-78

86.1

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Query:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFS--------------LFKSTSFSIFFNISL
        +S+KIMSL V TLGVISFIFGV+AENKKPA GTPIPGKGIVVCQYP DPTV LGYLS+AFLLASSIAGYFS              LFKSTSFSIFFNI+L
Subjt:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFS--------------LFKSTSFSIFFNISL

Query:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
        FTTGLAITLLVW TVTEQIHLTRNVYHNL+TACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
Subjt:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA

XP_023536229.1 uncharacterized protein LOC111797461 [Cucurbita pepo subsp. pepo]

7.4e-78

87.17

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Query:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFS--------------LFKSTSFSIFFNISL
        +S+KIMSL VATLGVISFIFGVVAENKKPASGTPIPGKGIV+CQYP DPTVALGYLS+AFLLASSIAGYFS              LFKSTSFSIFFNI+L
Subjt:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFS--------------LFKSTSFSIFFNISL

Query:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
        FTTGLAITLLVW TVTEQIHLTRNV+HNLETAC TAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
Subjt:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EUE5 uncharacterized protein LOC111436725

2.3e-77

85.03

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Query:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFS--------------LFKSTSFSIFFNISL
        +S+KIMSLI+ATLGVISFIFGVVAENKKPASGTPIPGKGIV+CQYP DPTVA GYLS+AFLLASSIAGYFS              LFKSTSFSIFFNI+L
Subjt:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFS--------------LFKSTSFSIFFNISL

Query:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
        FTTGLAITLL+W TVTEQIHLTRNV+HNLETAC TAKTGLLGGGAFLSLDSSLFWLV+LMLAGNAREDYFDEIEENGDSAEALKN+A
Subjt:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA

A0A6J1EYG1 uncharacterized protein LOC111439668

1.0e-77

87.17

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Query:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFS--------------LFKSTSFSIFFNISL
        MSVKI+SL VATLGVISFIFGVVAENKKPASGT IPGKGIVVCQYP DPTVALGYLS+AFLLASSIAGYFS              LF+STSFSIFFNI+L
Subjt:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFS--------------LFKSTSFSIFFNISL

Query:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
        FTTGLAITLLVW TV EQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDS EALKNNA
Subjt:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA

A0A6J1F3Q5 uncharacterized protein LOC111439666

1.2e-86

100

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Query:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFSLFKSTSFSIFFNISLFTTGLAITLLVWHT
        MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFSLFKSTSFSIFFNISLFTTGLAITLLVWHT
Subjt:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFSLFKSTSFSIFFNISLFTTGLAITLLVWHT

Query:  VTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
        VTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
Subjt:  VTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA

A0A6J1FA61 uncharacterized protein LOC111443679

3.6e-78

86.63

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Query:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFSL--------------FKSTSFSIFFNISL
        +SVKIMSL VATLGVISFIFGVVAENKKPASGTPIPGKGIV+CQYP DPTVALGYLS+AFLLASSIAGYFSL              FKS+SFSIFFNI+L
Subjt:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFSL--------------FKSTSFSIFFNISL

Query:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
        FTTGLAITLLVW TVTEQIHLTRNV+HNLE ACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDS EALKNNA
Subjt:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA

A0A6J1IF65 uncharacterized protein LOC111476666

2.6e-76

84.49

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Query:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFSL--------------FKSTSFSIFFNISL
        +SVKIMSL V TLGVISFIFGVVAENKKPASGTPIPGKGIV+CQYP DPTVALGYLS+AFLLASSIAGYFSL              FKS++FSIFFNI+L
Subjt:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFSL--------------FKSTSFSIFFNISL

Query:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA
        FTTGLAITLL+W TV EQIHLTRNV+HNLE ACPTAKTGLLGGGAFLSLDSSLFWLV LMLAGNAREDYFDEIEENGDSAEALKNNA
Subjt:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G31130.1 Protein of unknown function (DUF1218)

5.5e-63

70.11

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Query:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFS--------------LFKSTSFSIFFNISL
        +S+K MSL+V+ LGV+SF+ GV+AENKKPASGTPI GKG+V+C+YP DPTVALGYLS AFLLA ++AGY S              LFKSTSFS+FFNI+L
Subjt:  MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFS--------------LFKSTSFSIFFNISL

Query:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIE
         T+GLA++LL+W T+TEQ+HLTRNV+ NLET+CPTAKTGLLGGGAF+SLDS LFWLVALMLA NARED+FDE+E
Subjt:  FTTGLAITLLVWHTVTEQIHLTRNVYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIE

Sequences

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CDS sequence

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ATGTCGGTCAAAATAATGTCTCTTATTGTCGCAACTTTAGGTGTGATATCCTTTATATTTGGAGTCGTAGCTGAGAACAAGAAGCCTGCATCTGGAACTCCCATCCCAGG
CAAAGGCATTGTTGTCTGTCAGTATCCAGTGGACCCAACTGTGGCCTTGGGATATCTTTCACTTGCGTTTCTTCTTGCTTCTTCAATTGCAGGATACTTCTCTTTGTTTA
AGAGCACCAGTTTCTCTATTTTCTTCAACATTTCCCTGTTCACAACTGGATTGGCTATAACTTTGCTCGTATGGCATACAGTCACTGAGCAAATTCACTTGACTCGCAAC
GTTTATCACAATCTCGAGACAGCATGCCCGACCGCTAAGACTGGTCTTCTAGGTGGTGGTGCATTTTTATCCCTTGATTCATCCCTCTTTTGGTTGGTTGCCTTGATGTT
GGCTGGAAATGCTCGAGAGGACTACTTTGATGAAATAGAGGAAAACGGAGACAGTGCTGAGGCTCTTAAGAACAACGCATGA

mRNA sequence

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Protein sequence

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MSVKIMSLIVATLGVISFIFGVVAENKKPASGTPIPGKGIVVCQYPVDPTVALGYLSLAFLLASSIAGYFSLFKSTSFSIFFNISLFTTGLAITLLVWHTVTEQIHLTRN
VYHNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGDSAEALKNNA

CmoCh09G011710 (gene) of Cucurbita moschata (Rifu) v1 genome