; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G011920 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G011920
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCmo_Chr09:8748631..8752870
RNA-Seq ExpressionCmoCh09G011920
SyntenyCmoCh09G011920
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141516.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucumis sativus]3.6e-14590.72Show/hide
Query:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPSPS-PTTFKPVAIFRKKPA--PKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAAS+AAASLGVSEML NPLSF   S+RSAPSPS P TFK VA+F KKPA   K KPSA SP+NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPSPS-PTTFKPVAIFRKKPA--PKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYR
        PGDYGYDP GLSK PE+FTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGN+IPINL+ AV+AEVVLVGGAEYYR
Subjt:  PGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYR

Query:  IINGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
        IINGLNFEDKLH GGPFDPLGLADDPDQAAILKVKEIKNGRLA+FAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISG AERVPTL
Subjt:  IINGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL

XP_022932823.1 chlorophyll a-b binding protein CP26, chloroplastic-like [Cucurbita moschata]1.2e-161100Show/hide
Query:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD
        MASLAASSAAASLGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD
Subjt:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD

Query:  YGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRIIN
        YGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRIIN
Subjt:  YGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRIIN

Query:  GLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
        GLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
Subjt:  GLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL

XP_022973438.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucurbita maxima]1.4e-14491.07Show/hide
Query:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPS-PSPTTFKPVAIFRKKP--APKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAAS+AAASLGVSEML NPLS S ASARSA S  SP T K VAIF KKP  APK KPSAVSP+NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPS-PSPTTFKPVAIFRKKP--APKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYR
        PGDYGYDP GLSK PE+F+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGN+IPINL+ AVVAEVVLVGGAEYYR
Subjt:  PGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYR

Query:  IINGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
        IINGLNFEDKLH GGPFDPLGLADDPDQAAILKVKEIKNGRLA+FAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISG AERVPTL
Subjt:  IINGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL

XP_023521204.1 chlorophyll a-b binding protein CP26, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]8.0e-15395.5Show/hide
Query:  MASLAAS-SAAASLGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
        MASLAAS +AAASLGVSEML NPLSFS ASA SAPSPSP TFKPVAIF KKPAPKSKPS VSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
Subjt:  MASLAAS-SAAASLGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG

Query:  DYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRII
        DYGYDP GLSKN ENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRII
Subjt:  DYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRII

Query:  NGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
        NGLNFEDKLH GGPFDPLGLADDPDQAAILKVKEIKNGRLA+FAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISG AERVPTL
Subjt:  NGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL

XP_038889943.1 chlorophyll a-b binding protein CP26, chloroplastic [Benincasa hispida]8.6e-14791.41Show/hide
Query:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPS-PSPTTFKPVAIFRKKPA--PKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAAS+AAASLGVSEML NPLSFS ASARSAPS  SP TFK VA+F KKPA   K KPSAVSP+NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPS-PSPTTFKPVAIFRKKPA--PKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYR
        PGDYGYDP GLSK PE+F+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGN+IPINL+ AV+AEVVLVGGAEYYR
Subjt:  PGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYR

Query:  IINGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
        IINGLNFEDKLH GGPFDPLGLADDPDQAAILKVKEIKNGRLA+FAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISG AERVPTL
Subjt:  IINGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL

TrEMBL top hitse value%identityAlignment
A0A0A0KXR5 Chlorophyll a-b binding protein, chloroplastic1.8e-14590.72Show/hide
Query:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPSPS-PTTFKPVAIFRKKPA--PKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAAS+AAASLGVSEML NPLSF   S+RSAPSPS P TFK VA+F KKPA   K KPSA SP+NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPSPS-PTTFKPVAIFRKKPA--PKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYR
        PGDYGYDP GLSK PE+FTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGN+IPINL+ AV+AEVVLVGGAEYYR
Subjt:  PGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYR

Query:  IINGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
        IINGLNFEDKLH GGPFDPLGLADDPDQAAILKVKEIKNGRLA+FAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISG AERVPTL
Subjt:  IINGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL

A0A6J1DTI7 Chlorophyll a-b binding protein, chloroplastic7.4e-14489.66Show/hide
Query:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPSPSPT-TFKPVAIFRKKPAPKSKPS-AVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVP
        MASLAAS+AAASLGVSEML NPLSF   S RSAPS S + T K VA+F KKPA K+KPS AVSP+NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVP
Subjt:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPSPSPT-TFKPVAIFRKKPAPKSKPS-AVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVP

Query:  GDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRI
        GDYGYDP GLSK PE+F+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGN+IPINL+ AV+AEVVLVGGAEYYRI
Subjt:  GDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRI

Query:  INGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
        INGLNFEDKLH GGPFDPLGLADDPDQAAILKVKEIKNGRLA+FAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISG  ERVPTL
Subjt:  INGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL

A0A6J1EWI5 Chlorophyll a-b binding protein, chloroplastic1.9e-14490.72Show/hide
Query:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPS-PSPTTFKPVAIFRKK--PAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAAS+AAASLGVSEML NPLSFS ASARSA S  SP T K VA+F KK  PAPK KPSAVSP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPS-PSPTTFKPVAIFRKK--PAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYR
        PGDYGYDP GLSK PE+F+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGN+IPINL+ AV AEVVLVGGAEYYR
Subjt:  PGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYR

Query:  IINGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
        IINGLNFEDKLH GGPFDPLGLADDPDQAAILKVKEIKNGRLA+FAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISG AERVPTL
Subjt:  IINGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL

A0A6J1F2U3 Chlorophyll a-b binding protein, chloroplastic6.0e-162100Show/hide
Query:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD
        MASLAASSAAASLGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD
Subjt:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD

Query:  YGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRIIN
        YGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRIIN
Subjt:  YGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRIIN

Query:  GLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
        GLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
Subjt:  GLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL

A0A6J1ID20 Chlorophyll a-b binding protein, chloroplastic6.7e-14591.07Show/hide
Query:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPS-PSPTTFKPVAIFRKKP--APKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAAS+AAASLGVSEML NPLS S ASARSA S  SP T K VAIF KKP  APK KPSAVSP+NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASSAAASLGVSEMLVNPLSFSTASARSAPS-PSPTTFKPVAIFRKKP--APKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYR
        PGDYGYDP GLSK PE+F+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGN+IPINL+ AVVAEVVLVGGAEYYR
Subjt:  PGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYR

Query:  IINGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
        IINGLNFEDKLH GGPFDPLGLADDPDQAAILKVKEIKNGRLA+FAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISG AERVPTL
Subjt:  IINGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL

SwissProt top hitse value%identityAlignment
P06671 Chlorophyll a-b binding protein, chloroplastic4.7e-5548.22Show/hide
Query:  STASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNPENFTKYQAFELIH
        STA A  A +   ++F    +  +K A K+KP+A S      + WYGPDR ++L  G L   E P YL GE PGDYG+D  GLS +PE F K +  E+IH
Subjt:  STASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNPENFTKYQAFELIH

Query:  ARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRIINGLNFE--DKLHLGGPFDPLGLA
         RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I   +++A    +VVL+G  E YRI  G   E  D L+ GG FDPLGLA
Subjt:  ARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRIINGLNFE--DKLHLGGPFDPLGLA

Query:  DDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        DDP+    LKVKE+K GRLA+ +M GF+ QA VTG+GP+ENLA H++DP  NN
Subjt:  DDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P12330 Chlorophyll a-b binding protein 1, chloroplastic7.8e-5850.99Show/hide
Query:  STASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNPENFTKYQAFELIH
        S   AR+APS S   F    I  +K A K KP+A S      + WYG DR ++L  G L   E P YL GE PGDYG+D  GLS +PE F K +  E+IH
Subjt:  STASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNPENFTKYQAFELIH

Query:  ARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRIINGLNFE--DKLHLGGPFDPLGLA
        +RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I   +++A    +VVL+G  E YRI  G   E  D L+ GG FDPLGLA
Subjt:  ARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRIINGLNFE--DKLHLGGPFDPLGLA

Query:  DDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        DDP+  A LKVKEIKNGRLA+F+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  DDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P27497 Chlorophyll a-b binding protein M9, chloroplastic3.3e-5649.01Show/hide
Query:  STASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNPENFTKYQAFELIH
        STA A  A +   + F    +  +K A K+KP+A S      + WYGPDR ++L  G L   E P YL GE PGDYG+D  GLS +PE F K +  E+IH
Subjt:  STASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNPENFTKYQAFELIH

Query:  ARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRIINGLNFE--DKLHLGGPFDPLGLA
        +RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I   +++A    +VVL+G  E YR+  G   E  D L+ GG FDPLGLA
Subjt:  ARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRIINGLNFE--DKLHLGGPFDPLGLA

Query:  DDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        DDP+  A +KVKE+KNGRLA+F+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  DDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P27517 Chlorophyll a-b binding protein of LHCII type I, chloroplastic1.9e-5653.08Show/hide
Query:  KWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL
        ++YGPDR  FL  G    ++ PEYL GE PGDYG+D  GLS +P+ F +Y+  ELIHARWA+LGA G + PE  +++      E VWFK GA +     L
Subjt:  KWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL

Query:  NYFGNSIPI---NLVAAVVAEVVLVGGAEYYRIING----LNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVEN
        NY GN   I   +++A +  +VVL+G AE YR   G    L+  D L+ GGPFDPLGLADDPD  A LKVKEIKNGRLA+F+ LGF+ QA VTG+GPV+N
Subjt:  NYFGNSIPI---NLVAAVVAEVVLVGGAEYYRIING----LNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVEN

Query:  LAKHLSDPFGN
        L  HL+DP  N
Subjt:  LAKHLSDPFGN

Q9XF89 Chlorophyll a-b binding protein CP26, chloroplastic9.0e-13183.21Show/hide
Query:  ASLGVSEMLVNPLSFSTASARSAP-SPSPTTFKPVAIF-RKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGL
        ASLGVSEML  PL+F   S  SAP + SP+TFK VA+F +KKPAP +K  AVS  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDP GL
Subjt:  ASLGVSEMLVNPLSFSTASARSAP-SPSPTTFKPVAIF-RKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGL

Query:  SKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRIINGLNFEDKL
         K PENF KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG +IPINLV AVVAEVVL+GGAEYYRI NGL+FEDKL
Subjt:  SKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRIINGLNFEDKL

Query:  HLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
        H GGPFDPLGLA DP+Q A+LKVKEIKNGRLA+FAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  HLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 35.0e-5243.45Show/hide
Query:  LGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNP
        +  S M ++  +F+  +   +P+ S          RK  A    PS         + WYG DR  +L        E P YL GE PGDYG+D  GLS +P
Subjt:  LGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNP

Query:  ENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRII-NGL--NFED
        E F + +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +   +++A    +V+L+G  E YR+  NG     ED
Subjt:  ENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRII-NGL--NFED

Query:  KLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         L+ GG FDPLGLA DP+  A LKVKE+KNGRLA+F+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  KLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT1G29920.1 chlorophyll A/B-binding protein 25.0e-5243.45Show/hide
Query:  LGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNP
        +  S M ++  +F+  +   +P+ S          RK  A    PS         + WYG DR  +L        E P YL GE PGDYG+D  GLS +P
Subjt:  LGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNP

Query:  ENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRII-NGL--NFED
        E F + +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +   +++A    +V+L+G  E YR+  NG     ED
Subjt:  ENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRII-NGL--NFED

Query:  KLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         L+ GG FDPLGLA DP+  A LKVKE+KNGRLA+F+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  KLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT1G29930.1 chlorophyll A/B binding protein 12.9e-5243.45Show/hide
Query:  LGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNP
        +  S M ++  +F+  + + +P+ S          RK  A    PS         + WYG DR  +L        E P YL GE PGDYG+D  GLS +P
Subjt:  LGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNP

Query:  ENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRII-NGL--NFED
        E F + +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +   +++A    +V+L+G  E YR+  NG     ED
Subjt:  ENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRII-NGL--NFED

Query:  KLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         L+ GG FDPLGLA DP+  A LKVKE+KNGRLA+F+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  KLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B11.7e-5247.96Show/hide
Query:  AVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKT
        A  P     + WYG DR  +L        E P YL GE PGDYG+D  GLS +PE F + +  E+IH+RWAMLGA G + PE   + G   G EAVWFK 
Subjt:  AVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKT

Query:  GALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRIING---LNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAY
        G+ +     L+Y GN   +   +++A    +V+L+G  E YR+         ED L+ GG FDPLGLA DP+  A LKVKE+KNGRLA+F+M GF+ QA 
Subjt:  GALLLDGNTLNYFGNSIPI---NLVAAVVAEVVLVGGAEYYRIING---LNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAY

Query:  VTGEGPVENLAKHLSDPFGNN
        VTG+GP+ENLA HL+DP  NN
Subjt:  VTGEGPVENLAKHLSDPFGNN

AT4G10340.1 light harvesting complex of photosystem II 56.4e-13283.21Show/hide
Query:  ASLGVSEMLVNPLSFSTASARSAP-SPSPTTFKPVAIF-RKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGL
        ASLGVSEML  PL+F   S  SAP + SP+TFK VA+F +KKPAP +K  AVS  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDP GL
Subjt:  ASLGVSEMLVNPLSFSTASARSAP-SPSPTTFKPVAIF-RKKPAPKSKPSAVSPINDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGL

Query:  SKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRIINGLNFEDKL
         K PENF KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG +IPINLV AVVAEVVL+GGAEYYRI NGL+FEDKL
Subjt:  SKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLVAAVVAEVVLVGGAEYYRIINGLNFEDKL

Query:  HLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL
        H GGPFDPLGLA DP+Q A+LKVKEIKNGRLA+FAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  HLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGCAAAGGGGCGTCCCTGAAGAGACGCCCATCCGGCCATATGCGGGCCAACGTAGAAGAATGCCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACC
ACCACGCAAAGTGGGCATTGAAGACATGTTGAGACACAAGCATAACAGAGACATCAGCATAGACATGAAGGACAAGATAGGCTTGTTGAAGGGCCGGGTAGGGCCCCGGG
CCTTAACCTCAAAAGTTGAGGTTTCGGAAGGAATTTGGTCATGCGGTTCGGGAGTTAATGTGGGCGAGCGTGCCGAGACGAGTGTCTTGGGGCGACTTCCTTTGAAATGG
GTTTTTGAAGGACAGTACCGGACGGCACGGGTGTGCCGGTATTGCGCCCTAGCCCGCGTGTTGGAGGTTGCTACATACACCCACTATCCGCTTCTTCCTTCTCCACGTCT
TGCATCCATTCTGCCCATGGCTTCTTTAGCTGCCTCCTCCGCCGCCGCCTCCCTCGGCGTTTCCGAAATGCTCGTAAACCCTTTAAGCTTCTCCACTGCCTCTGCTAGAT
CCGCTCCCTCTCCTAGTCCGACCACCTTCAAGCCTGTTGCAATTTTCAGGAAGAAGCCCGCCCCCAAGTCAAAGCCCTCCGCCGTCTCTCCGATCAATGACGAGCTCGCC
AAGTGGTACGGTCCCGACCGAAGGATTTTCTTGCCAGATGGGCTGTTGGATCGATCCGAGATCCCGGAGTACTTGAACGGAGAAGTCCCCGGCGACTACGGTTACGACCC
GTTAGGACTCAGCAAGAATCCAGAAAACTTCACCAAATATCAAGCCTTTGAGTTGATACATGCACGATGGGCGATGCTTGGGGCTGCTGGTTTCATCATTCCTGAGGCTT
TCAACAAATTTGGCGCCAACTGTGGCCCGGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGAATTACTTTGGAAATAGCATTCCGATCAAC
CTCGTTGCCGCGGTCGTTGCTGAGGTCGTTCTTGTTGGTGGCGCTGAATATTACCGAATCATCAATGGCTTGAACTTTGAGGACAAACTTCACCTGGGAGGGCCGTTCGA
CCCGTTGGGGCTAGCGGACGACCCAGACCAAGCCGCGATCTTGAAGGTGAAGGAGATCAAGAATGGGAGATTGGCATTGTTTGCAATGCTAGGGTTTTACTTTCAAGCAT
ACGTGACTGGAGAAGGGCCAGTGGAGAACTTGGCTAAGCATTTGAGTGATCCTTTTGGAAATAACTTGCTCACAGTCATTTCAGGGAAGGCTGAAAGAGTTCCAACCCTT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGCAAAGGGGCGTCCCTGAAGAGACGCCCATCCGGCCATATGCGGGCCAACGTAGAAGAATGCCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACC
ACCACGCAAAGTGGGCATTGAAGACATGTTGAGACACAAGCATAACAGAGACATCAGCATAGACATGAAGGACAAGATAGGCTTGTTGAAGGGCCGGGTAGGGCCCCGGG
CCTTAACCTCAAAAGTTGAGGTTTCGGAAGGAATTTGGTCATGCGGTTCGGGAGTTAATGTGGGCGAGCGTGCCGAGACGAGTGTCTTGGGGCGACTTCCTTTGAAATGG
GTTTTTGAAGGACAGTACCGGACGGCACGGGTGTGCCGGTATTGCGCCCTAGCCCGCGTGTTGGAGGTTGCTACATACACCCACTATCCGCTTCTTCCTTCTCCACGTCT
TGCATCCATTCTGCCCATGGCTTCTTTAGCTGCCTCCTCCGCCGCCGCCTCCCTCGGCGTTTCCGAAATGCTCGTAAACCCTTTAAGCTTCTCCACTGCCTCTGCTAGAT
CCGCTCCCTCTCCTAGTCCGACCACCTTCAAGCCTGTTGCAATTTTCAGGAAGAAGCCCGCCCCCAAGTCAAAGCCCTCCGCCGTCTCTCCGATCAATGACGAGCTCGCC
AAGTGGTACGGTCCCGACCGAAGGATTTTCTTGCCAGATGGGCTGTTGGATCGATCCGAGATCCCGGAGTACTTGAACGGAGAAGTCCCCGGCGACTACGGTTACGACCC
GTTAGGACTCAGCAAGAATCCAGAAAACTTCACCAAATATCAAGCCTTTGAGTTGATACATGCACGATGGGCGATGCTTGGGGCTGCTGGTTTCATCATTCCTGAGGCTT
TCAACAAATTTGGCGCCAACTGTGGCCCGGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGAATTACTTTGGAAATAGCATTCCGATCAAC
CTCGTTGCCGCGGTCGTTGCTGAGGTCGTTCTTGTTGGTGGCGCTGAATATTACCGAATCATCAATGGCTTGAACTTTGAGGACAAACTTCACCTGGGAGGGCCGTTCGA
CCCGTTGGGGCTAGCGGACGACCCAGACCAAGCCGCGATCTTGAAGGTGAAGGAGATCAAGAATGGGAGATTGGCATTGTTTGCAATGCTAGGGTTTTACTTTCAAGCAT
ACGTGACTGGAGAAGGGCCAGTGGAGAACTTGGCTAAGCATTTGAGTGATCCTTTTGGAAATAACTTGCTCACAGTCATTTCAGGGAAGGCTGAAAGAGTTCCAACCCTT
TAAATGAATCAATGCCATAACCCAACCCCAAGTTTGTGTATTGAATGAAAAT
Protein sequenceShow/hide protein sequence
MTSKGASLKRRPSGHMRANVEECHDAIEEDDASSNTPPRKVGIEDMLRHKHNRDISIDMKDKIGLLKGRVGPRALTSKVEVSEGIWSCGSGVNVGERAETSVLGRLPLKW
VFEGQYRTARVCRYCALARVLEVATYTHYPLLPSPRLASILPMASLAASSAAASLGVSEMLVNPLSFSTASARSAPSPSPTTFKPVAIFRKKPAPKSKPSAVSPINDELA
KWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPLGLSKNPENFTKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN
LVAAVVAEVVLVGGAEYYRIINGLNFEDKLHLGGPFDPLGLADDPDQAAILKVKEIKNGRLALFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGKAERVPTL