; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G012120 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G012120
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationCmo_Chr09:9339342..9339605
RNA-Seq ExpressionCmoCh09G012120
SyntenyCmoCh09G012120
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039168.1 Mediator of RNA polymerase II transcription subunit 8 [Cucumis melo var. makuwa]2.7e-3695.4Show/hide
Query:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRSNSYNFNGPT KATGFSTS DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

KGN45893.1 hypothetical protein Csa_005289 [Cucumis sativus]1.6e-3695.4Show/hide
Query:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRSNSYNFNGPT KATGFSTS DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

XP_022930185.1 uncharacterized protein LOC111436683 [Cucurbita moschata]2.6e-39100Show/hide
Query:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

XP_022974055.1 uncharacterized protein LOC111472683 [Cucurbita maxima]9.3e-3795.4Show/hide
Query:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSCSGEF+FQTRSNSYNFNGPT  ATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRY L
Subjt:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

XP_023536368.1 uncharacterized protein LOC111797558 [Cucurbita pepo subsp. pepo]1.7e-3898.85Show/hide
Query:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPT KATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

TrEMBL top hitse value%identityAlignment
A0A0A0K8Y3 Uncharacterized protein7.7e-3795.4Show/hide
Query:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRSNSYNFNGPT KATGFSTS DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A2P5BV48 Uncharacterized protein3.5e-2978.16Show/hide
Query:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKS+SFP+YSS+ SGEF F+ RSNSYNFNGP  K +GF TS+DPELQRK+RIASYNVF ME KVKSSV+NSFKWIK+KFSDIRYG+
Subjt:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A5A7T8F8 Mediator of RNA polymerase II transcription subunit 81.3e-3695.4Show/hide
Query:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRSNSYNFNGPT KATGFSTS DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A6J1EWA0 uncharacterized protein LOC1114366831.3e-39100Show/hide
Query:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A6J1ICY9 uncharacterized protein LOC1114726834.5e-3795.4Show/hide
Query:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSCSGEF+FQTRSNSYNFNGPT  ATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRY L
Subjt:  MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72720.1 Protein of unknown function (DUF3511)7.4e-0838Show/hide
Query:  EKSKSFP----------KYSSSCSGEFSFQT----RSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        EKS+S P           YS+S    +   T     SN+ +      K  GF    + E+QRK+R+ASYNV+ +E +VK S+K SFKW K   S+  YGL
Subjt:  EKSKSFP----------KYSSSCSGEFSFQT----RSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

AT2G19460.1 Protein of unknown function (DUF3511)3.1e-0655.56Show/hide
Query:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTK
        DP+LQRK+R+ SY  + +E K+K S + SFKWIK K
Subjt:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTK

AT3G05725.1 Protein of unknown function (DUF3511)1.4e-0645.45Show/hide
Query:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        DPE++RKRR+A Y +++ E K+K +++ S+KWIK + S I +G+
Subjt:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

AT4G09890.1 Protein of unknown function (DUF3511)1.8e-1755.91Show/hide
Query:  MEKSKSFPKYSSSCS-GEFSF-QTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFS----DIRYGL
        M+ SKS+ +YSSS S  EF + Q RSNSYNFNGP         +TDPE++RK+R+ASYN+F  E K+KS++KNSFKWIK KFS     IRY +
Subjt:  MEKSKSFPKYSSSCS-GEFSF-QTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFS----DIRYGL

AT5G11970.1 Protein of unknown function (DUF3511)5.1e-0940Show/hide
Query:  YSSSCSGEF-----SFQTRSNSYNFNGPTTKATGFSTS---TDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYG
        Y  +  G+F     S+ TR N+  ++    K+   S S   TDPELQRK+R+ASY ++ +E KVK S +NSF+W+K +++ + YG
Subjt:  YSSSCSGEF-----SFQTRSNSYNFNGPTTKATGFSTS---TDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAGCAAATCCTTCCCCAAGTACTCGTCCTCGTGCTCGGGCGAGTTCAGTTTCCAAACCCGATCCAACTCGTACAATTTCAATGGCCCGACTACAAAGGCTAC
TGGGTTCTCGACCTCGACTGATCCCGAGCTTCAAAGGAAGAGAAGAATTGCGTCGTATAATGTTTTCAACATGGAAAACAAGGTCAAGTCTAGTGTAAAGAACAGCTTCA
AGTGGATCAAGACTAAGTTTAGCGACATTCGCTATGGTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAGCAAATCCTTCCCCAAGTACTCGTCCTCGTGCTCGGGCGAGTTCAGTTTCCAAACCCGATCCAACTCGTACAATTTCAATGGCCCGACTACAAAGGCTAC
TGGGTTCTCGACCTCGACTGATCCCGAGCTTCAAAGGAAGAGAAGAATTGCGTCGTATAATGTTTTCAACATGGAAAACAAGGTCAAGTCTAGTGTAAAGAACAGCTTCA
AGTGGATCAAGACTAAGTTTAGCGACATTCGCTATGGTTTGTGA
Protein sequenceShow/hide protein sequence
MEKSKSFPKYSSSCSGEFSFQTRSNSYNFNGPTTKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL