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CmoCh09G012270 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G012270
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBnaC02g40070D protein
Genome locationCmo_Chr09:10474333..10474791
RNA-Seq ExpressionCmoCh09G012270
SyntenyCmoCh09G012270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592306.1 hypothetical protein SDJN03_14652, partial [Cucurbita argyrosperma subsp. sororia]9.3e-4998.98Show/hide
Query:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLNT
        MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCWDEM RSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLNT
Subjt:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLNT

KAG6592308.1 hypothetical protein SDJN03_14654, partial [Cucurbita argyrosperma subsp. sororia]6.5e-4287.63Show/hide
Query:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN
        MGGNNRSKKAHSSFSIFNFFKS++SRKEDHCDHS  WDE+ RS K+WPSDEDK HRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPA+G KL+
Subjt:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN

KAG6592313.1 hypothetical protein SDJN03_14659, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4085.57Show/hide
Query:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN
        MGGNNRSKK+HSSFSIFNFFK +K RKEDH DH   W+EM RSGKVWPSDEDKTHRWVAEPGIDRKAKDYID+IYRNR+FESERQTVTLPANG KL+
Subjt:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN

KAG6592314.1 hypothetical protein SDJN03_14660, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4085.57Show/hide
Query:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN
        MGGNNRSKK HSSFSIFNFFK K+ RKEDH DHS CWDEM RS KVWPSDEDK HRWVAEPGIDRKAKDYIDRIYRNRV ESERQT+TLPA+G KL+
Subjt:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN

KAG6592316.1 hypothetical protein SDJN03_14662, partial [Cucurbita argyrosperma subsp. sororia]5.0e-4287.63Show/hide
Query:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN
        MGGNNRSKKAHSSFSIFNFFK ++ RKEDHCDHS CWDEM RS KVWPSDEDK HRWVAEPGIDRKAKDYIDRIYRNRV ESERQTVTLPA+G KL+
Subjt:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN

TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein7.0e-3477.08Show/hide
Query:  GNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCW-DEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN
        G NR KK+HSSFSIF+FFKSK+ RK DH DH   W DEM RS KVWPSDEDK H W+AEPGIDRKAKDYIDRIYRNRVFESERQTVT+  NG K N
Subjt:  GNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCW-DEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN

A0A0A0KAK6 Uncharacterized protein4.7e-3882.65Show/hide
Query:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHS-SCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN
        MGGNNR KKAH+SFSIF+FFKS++ RK DHC+HS SC DEM RSGKVWPSDEDK H WVAEPGIDRKAKDYIDRIYRNRVFESERQTVT+  NGIK N
Subjt:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHS-SCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN

A0A0A0KBW1 Uncharacterized protein1.2e-3377.08Show/hide
Query:  GNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCW-DEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN
        G NR KK+HSSFSIF+FFKS++ RK DH DH   W DEM RS KVWPSDEDK H WVAEPGIDRKAKDYIDRIYRNRVFESERQTVT+  NG K N
Subjt:  GNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCW-DEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN

A0A5A7SWT9 Uncharacterized protein1.5e-3679.59Show/hide
Query:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHS-SCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN
        MGGNNR KK+HSSFSIF+FFKS++ RK D+C+HS SC DEM RSGKVWPSDEDK H WVAEPGIDRKAKDYIDRIYRNRVFESERQT+T+  NG K N
Subjt:  MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHS-SCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLN

A0A5A7SYN4 Uncharacterized protein2.3e-3278.02Show/hide
Query:  GNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCW-DEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPAN
        G ++ KK+HSSFS F+FFKSK S+KEDH DH   W D+ SRSGKVWPSDEDK H WVAEPGIDRKAKDYIDRIYRNRVFESERQTVT+P N
Subjt:  GNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCW-DEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein1.4e-1348.89Show/hide
Query:  MGGNNRSKKAHSS--FSIFNFFKSKKSRKEDHCDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVT
        MGG NRS   HSS  FS+F+FFK+++S +    +    WD+   + K   SDEDK + WVAEPGIDRKA  +I + +  RV ESERQT++
Subjt:  MGGNNRSKKAHSS--FSIFNFFKSKKSRKEDHCDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVT

AT5G26620.1 unknown protein7.0e-1047.69Show/hide
Query:  SRKEDH--CDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTV
        +R+  H   +  + WD++  + K W SDEDK + WVAEPGIDRKA  +I + + +RV ESERQT+
Subjt:  SRKEDH--CDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGCAACAATCGATCAAAGAAAGCTCACTCATCTTTTTCGATCTTCAATTTTTTCAAATCCAAAAAAAGTAGAAAGGAAGATCACTGCGACCACAGTAGCTGTTG
GGACGAGATGTCAAGATCGGGTAAGGTGTGGCCGAGCGATGAGGACAAAACGCATCGTTGGGTTGCTGAACCTGGCATTGATAGAAAAGCTAAGGATTATATTGACAGGA
TCTATCGAAACCGTGTTTTTGAATCTGAACGACAGACTGTTACTTTACCTGCCAATGGAATAAAACTCAATACACTACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGCAACAATCGATCAAAGAAAGCTCACTCATCTTTTTCGATCTTCAATTTTTTCAAATCCAAAAAAAGTAGAAAGGAAGATCACTGCGACCACAGTAGCTGTTG
GGACGAGATGTCAAGATCGGGTAAGGTGTGGCCGAGCGATGAGGACAAAACGCATCGTTGGGTTGCTGAACCTGGCATTGATAGAAAAGCTAAGGATTATATTGACAGGA
TCTATCGAAACCGTGTTTTTGAATCTGAACGACAGACTGTTACTTTACCTGCCAATGGAATAAAACTCAATACACTACAATAA
Protein sequenceShow/hide protein sequence
MGGNNRSKKAHSSFSIFNFFKSKKSRKEDHCDHSSCWDEMSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTLPANGIKLNTLQ