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CmoCh09G012280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G012280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr09:10481155..10484173
RNA-Seq ExpressionCmoCh09G012280
SyntenyCmoCh09G012280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592307.1 hypothetical protein SDJN03_14653, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3494.67Show/hide
Query:  RGRKEDHCDHGGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV
        RGRKEDHCDH GYWDEMPRSSKVWPSDEDK HRWVAEPGIDRKAKDYIDKIYRN VFQSERQTVTLPA GAKLDV
Subjt:  RGRKEDHCDHGGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV

KAG6592309.1 hypothetical protein SDJN03_14655, partial [Cucurbita argyrosperma subsp. sororia]2.8e-3286.67Show/hide
Query:  RGRKEDHCDHGGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV
        +GRKEDH DHGGYW++MPRS KVWPSDEDK HRWVAEPGIDRKAKDYIDKIYRNR+F+SERQTVTLPANG KLD+
Subjt:  RGRKEDHCDHGGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV

KAG6592311.1 hypothetical protein SDJN03_14657, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3286.67Show/hide
Query:  RGRKEDHCDHGGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV
        +GRKEDH DHGGYW+EMPRS KVWPSDEDK HRWVAEPGIDRKAKDYIDKIYRNR+F+SERQTVTLPANG KL++
Subjt:  RGRKEDHCDHGGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV

KAG6592313.1 hypothetical protein SDJN03_14659, partial [Cucurbita argyrosperma subsp. sororia]9.6e-3388Show/hide
Query:  RGRKEDHCDHGGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV
        +GRKEDH DHGGYW+EMPRS KVWPSDEDK HRWVAEPGIDRKAKDYIDKIYRNR+F+SERQTVTLPANG KLD+
Subjt:  RGRKEDHCDHGGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV

KAG6592316.1 hypothetical protein SDJN03_14662, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3186.67Show/hide
Query:  RGRKEDHCDHGGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV
        RGRKEDHCDH G WDEMPRS+KVWPSDEDK HRWVAEPGIDRKAKDYID+IYRNRV +SERQTVTLPA+G KLD+
Subjt:  RGRKEDHCDHGGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV

TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein2.9e-2778.95Show/hide
Query:  RGRKEDHCDHGGYW-DEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV
        RGRK DH DHGG W DEMPRS+KVWPSDEDK H W+AEPGIDRKAKDYID+IYRNRVF+SERQTVT+  NG K +V
Subjt:  RGRKEDHCDHGGYW-DEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV

A0A0A0KAK6 Uncharacterized protein1.2e-2577.63Show/hide
Query:  RGRKEDHCDH-GGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV
        RGRK DHC+H G   DEMPRS KVWPSDEDK H WVAEPGIDRKAKDYID+IYRNRVF+SERQTVT+  NG K +V
Subjt:  RGRKEDHCDH-GGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV

A0A0A0KBW1 Uncharacterized protein2.2e-2780.26Show/hide
Query:  RGRKEDHCDHGGYW-DEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV
        RGRK DH DHGG W DEMPRS+KVWPSDEDK H WVAEPGIDRKAKDYID+IYRNRVF+SERQTVT+  NG K +V
Subjt:  RGRKEDHCDHGGYW-DEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV

A0A5A7SWT9 Uncharacterized protein8.0e-2575Show/hide
Query:  RGRKEDHCDH-GGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV
        RGRK D+C+H G   DEMPRS KVWPSDEDK H WVAEPGIDRKAKDYID+IYRNRVF+SERQT+T+  NG K +V
Subjt:  RGRKEDHCDH-GGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPANGAKLDV

A0A5A7SYN4 Uncharacterized protein8.8e-2479.41Show/hide
Query:  RKEDHCDHGGYW-DEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPAN
        +KEDH DHGG W D+  RS KVWPSDEDK H WVAEPGIDRKAKDYID+IYRNRVF+SERQTVT+P N
Subjt:  RKEDHCDHGGYW-DEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVTLPAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein2.1e-0947.62Show/hide
Query:  RKEDHCDHGGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVT
        R+    +  G WD+   + K   SDEDK + WVAEPGIDRKA  +I K +  RV +SERQT++
Subjt:  RKEDHCDHGGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTVT

AT5G26620.1 unknown protein5.5e-1056.86Show/hide
Query:  WDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTV
        WD++  + K W SDEDK + WVAEPGIDRKA  +I K + +RV +SERQT+
Subjt:  WDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKIYRNRVFQSERQTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGATCGGGCAAGGTGTGGCCGAGCGATGAGGACAAAACGCATCGTTGGGTTGCTGAACCTGGCATTGATAGAAAAGCCAAGGATTACATTGATAGGATCTATCG
AAACCGTGTTTTTGAATCTAAGCGACAAACTATTACTTTACCTGCCAGTGGAACAAAACTCGATCCAAGAGGTAGAAAGGAAGATCACTGCGACCACGGTGGCTATTGGG
ACGAGATGCCAAGATCGAGCAAGGTGTGGCCGAGCGATGAAGACAAACCACATCGTTGGGTTGCTGAACCTGGCATAGATAGAAAAGCTAAAGATTACATTGACAAGATC
TATCGAAATCGTGTTTTTCAATCTGAGCGACAAACTGTTACTTTACCTGCCAATGGAGCAAAACTCGATGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGATCGGGCAAGGTGTGGCCGAGCGATGAGGACAAAACGCATCGTTGGGTTGCTGAACCTGGCATTGATAGAAAAGCCAAGGATTACATTGATAGGATCTATCG
AAACCGTGTTTTTGAATCTAAGCGACAAACTATTACTTTACCTGCCAGTGGAACAAAACTCGATCCAAGAGGTAGAAAGGAAGATCACTGCGACCACGGTGGCTATTGGG
ACGAGATGCCAAGATCGAGCAAGGTGTGGCCGAGCGATGAAGACAAACCACATCGTTGGGTTGCTGAACCTGGCATAGATAGAAAAGCTAAAGATTACATTGACAAGATC
TATCGAAATCGTGTTTTTCAATCTGAGCGACAAACTGTTACTTTACCTGCCAATGGAGCAAAACTCGATGTGTAA
Protein sequenceShow/hide protein sequence
MSRSGKVWPSDEDKTHRWVAEPGIDRKAKDYIDRIYRNRVFESKRQTITLPASGTKLDPRGRKEDHCDHGGYWDEMPRSSKVWPSDEDKPHRWVAEPGIDRKAKDYIDKI
YRNRVFQSERQTVTLPANGAKLDV