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CmoCh09G012300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G012300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr09:10513003..10513299
RNA-Seq ExpressionCmoCh09G012300
SyntenyCmoCh09G012300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592307.1 hypothetical protein SDJN03_14653, partial [Cucurbita argyrosperma subsp. sororia]8.3e-4288.66Show/hide
Query:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTKLD
        MG NNRSKKAHSSFSIFNFFKFRRGRKEDH DHS YWDEMPRSSKVWPSDEDK HRWVAEPGIDRKAKDYID+IYRN V +SERQTVTLP  G KLD
Subjt:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTKLD

KAG6592313.1 hypothetical protein SDJN03_14659, partial [Cucurbita argyrosperma subsp. sororia]3.2e-4185.57Show/hide
Query:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTKLD
        MG NNRSKK+HSSFSIFNFFKFR+GRKEDH DH  YW+EMPRS KVWPSDEDK HRWVAEPGIDRKAKDYID+IYRNR+ ESERQTVTLP +GTKLD
Subjt:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTKLD

KAG6592314.1 hypothetical protein SDJN03_14660, partial [Cucurbita argyrosperma subsp. sororia]4.0e-4492.78Show/hide
Query:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTKLD
        MG NNRSKK HSSFSIFNFFKF+RGRKEDHSDHS  WDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQT+TLP SGTKLD
Subjt:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTKLD

KAG6592315.1 hypothetical protein SDJN03_14661, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4595.88Show/hide
Query:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTKLD
        MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSD WDEMPRSSKVWPSDEDKMH WVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLP SGTKL+
Subjt:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTKLD

KAG6592316.1 hypothetical protein SDJN03_14662, partial [Cucurbita argyrosperma subsp. sororia]4.0e-4493.81Show/hide
Query:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTKLD
        MG NNRSKKAHSSFSIFNFFKFRRGRKEDH DHS  WDEMPRS+KVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLP SGTKLD
Subjt:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTKLD

TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein1.3e-3278.26Show/hide
Query:  NRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYW-DEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTK
        NR KK+HSSFSIF+FFK +RGRK DH DH   W DEMPRS+KVWPSDEDK H W+AEPGIDRKAKDYIDRIYRNRV ESERQTVT+  +GTK
Subjt:  NRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYW-DEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTK

A0A0A0K8W0 Uncharacterized protein6.7e-2969.89Show/hide
Query:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSG
        MG ++R KK HSSFSIF+FFK +RGRK D  +H   W+++P SSKVWPSDEDK +RWVAEPGIDRKAKDYIDRIY+NRV E+ERQTVT+  +G
Subjt:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSG

A0A0A0KAK6 Uncharacterized protein1.3e-3278.12Show/hide
Query:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHS-DYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTK
        MG NNR KKAH+SFSIF+FFK RRGRK DH +HS    DEMPRS KVWPSDEDK H WVAEPGIDRKAKDYIDRIYRNRV ESERQTVT+  +G K
Subjt:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHS-DYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTK

A0A0A0KBW1 Uncharacterized protein4.5e-3380.43Show/hide
Query:  NRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYW-DEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTK
        NR KK+HSSFSIF+FFK RRGRK DH DH   W DEMPRS+KVWPSDEDK H WVAEPGIDRKAKDYIDRIYRNRV ESERQTVT+  +GTK
Subjt:  NRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYW-DEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTK

A0A5A7SWT9 Uncharacterized protein2.2e-3277.08Show/hide
Query:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHS-DYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTK
        MG NNR KK+HSSFSIF+FFK RRGRK D+ +HS    DEMPRS KVWPSDEDK H WVAEPGIDRKAKDYIDRIYRNRV ESERQT+T+  +GTK
Subjt:  MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHS-DYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein1.9e-1251.11Show/hide
Query:  MGRNNRSKKAHSS--FSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVT
        MG  NRS   HSS  FS+F+FFK RR  + + +D S  WD+   + K   SDEDK + WVAEPGIDRKA  +I + +  RV ESERQT++
Subjt:  MGRNNRSKKAHSS--FSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVT

AT5G26620.1 unknown protein1.5e-0950.79Show/hide
Query:  RKEDHSDHSD-YWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTV
        R   H   +D  WD++  + K W SDEDK + WVAEPGIDRKA  +I + + +RV ESERQT+
Subjt:  RKEDHSDHSD-YWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACGCAACAATAGGTCGAAGAAAGCTCACTCATCTTTCTCGATCTTCAACTTCTTCAAATTCAGAAGAGGTAGAAAGGAAGATCACAGCGACCACAGTGACTATTG
GGACGAGATGCCAAGATCGAGCAAGGTATGGCCGAGCGATGAGGACAAAATGCATCGTTGGGTCGCTGAACCTGGCATTGATAGAAAAGCTAAGGATTACATTGACAGGA
TCTATCGAAACCGTGTTCTTGAATCTGAGCGACAAACTGTTACTTTACCGACCAGTGGAACAAAACTCGATTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACGCAACAATAGGTCGAAGAAAGCTCACTCATCTTTCTCGATCTTCAACTTCTTCAAATTCAGAAGAGGTAGAAAGGAAGATCACAGCGACCACAGTGACTATTG
GGACGAGATGCCAAGATCGAGCAAGGTATGGCCGAGCGATGAGGACAAAATGCATCGTTGGGTCGCTGAACCTGGCATTGATAGAAAAGCTAAGGATTACATTGACAGGA
TCTATCGAAACCGTGTTCTTGAATCTGAGCGACAAACTGTTACTTTACCGACCAGTGGAACAAAACTCGATTCGTAA
Protein sequenceShow/hide protein sequence
MGRNNRSKKAHSSFSIFNFFKFRRGRKEDHSDHSDYWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLESERQTVTLPTSGTKLDS