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CmoCh09G012310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G012310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description(thale cress) hypothetical protein
Genome locationCmo_Chr09:10524370..10529061
RNA-Seq ExpressionCmoCh09G012310
SyntenyCmoCh09G012310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592306.1 hypothetical protein SDJN03_14652, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4287.63Show/hide
Query:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIKLD
        MGGNNRSKK HSSFSIFNFFK K+ RKEDH DHS CWDEMPRS KVWPSDEDK HRWVAEPGIDRKAKDYIDRIYRNRV E+ERQTVTLPA+GIKL+
Subjt:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIKLD

KAG6592308.1 hypothetical protein SDJN03_14654, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4287.76Show/hide
Query:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIKLDL
        MGGNNRSKK HSSFSIFNFFK +R RKEDH DHSG WDE+PRSSK+WPSDEDK+HRWVAEPGIDRKAKDYIDRIYRNRV E+ERQTVTLPASG KLDL
Subjt:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIKLDL

KAG6592314.1 hypothetical protein SDJN03_14660, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4896.94Show/hide
Query:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIKLDL
        MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLE+ERQT+TLPASG KLDL
Subjt:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIKLDL

KAG6592315.1 hypothetical protein SDJN03_14661, partial [Cucurbita argyrosperma subsp. sororia]6.3e-4591.84Show/hide
Query:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIKLDL
        MG NNRSKK HSSFSIFNFFKF+RGRKEDHSDHS CWDEMPRSSKVWPSDEDKMH WVAEPGIDRKAKDYIDRIYRNRVLE+ERQTVTLPASG KL+L
Subjt:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIKLDL

KAG6592316.1 hypothetical protein SDJN03_14662, partial [Cucurbita argyrosperma subsp. sororia]6.8e-4793.88Show/hide
Query:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIKLDL
        MGGNNRSKK HSSFSIFNFFKF+RGRKEDH DHSGCWDEMPRS+KVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLE+ERQTVTLPASG KLDL
Subjt:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIKLDL

TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein3.2e-3477.66Show/hide
Query:  GNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCW-DEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIK
        G NR KK+HSSFSIF+FFK KRGRK DH DH G W DEMPRS+KVWPSDEDK H W+AEPGIDRKAKDYIDRIYRNRV E+ERQTVT+  +G K
Subjt:  GNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCW-DEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIK

A0A0A0K8W0 Uncharacterized protein1.5e-3174.19Show/hide
Query:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASG
        MGG++R KKTHSSFSIF+FFK KRGRK D  +H   W+++P SSKVWPSDEDK +RWVAEPGIDRKAKDYIDRIY+NRV ETERQTVT+  +G
Subjt:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASG

A0A0A0KAK6 Uncharacterized protein1.7e-3579.17Show/hide
Query:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSG-CWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIK
        MGGNNR KK H+SFSIF+FFK +RGRK DH +HSG C DEMPRS KVWPSDEDK H WVAEPGIDRKAKDYIDRIYRNRV E+ERQTVT+  +GIK
Subjt:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSG-CWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIK

A0A0A0KBW1 Uncharacterized protein5.4e-3477.66Show/hide
Query:  GNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCW-DEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIK
        G NR KK+HSSFSIF+FFK +RGRK DH DH G W DEMPRS+KVWPSDEDK H WVAEPGIDRKAKDYIDRIYRNRV E+ERQTVT+  +G K
Subjt:  GNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCW-DEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIK

A0A5A7SWT9 Uncharacterized protein1.9e-3477.08Show/hide
Query:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSG-CWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIK
        MGGNNR KK+HSSFSIF+FFK +RGRK D+ +HSG C DEMPRS KVWPSDEDK H WVAEPGIDRKAKDYIDRIYRNRV E+ERQT+T+  +G K
Subjt:  MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSG-CWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein1.4e-1348.89Show/hide
Query:  MGGNNRSKKTHSS--FSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVT
        MGG NRS   HSS  FS+F+FFK +R  +    +  G WD+   + K   SDEDK + WVAEPGIDRKA  +I + +  RV E+ERQT++
Subjt:  MGGNNRSKKTHSS--FSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVT

AT5G26620.1 unknown protein1.2e-0954.9Show/hide
Query:  WDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTV
        WD++  + K W SDEDK + WVAEPGIDRKA  +I + + +RV E+ERQT+
Subjt:  WDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGCAACAATAGGTCGAAGAAAACTCACTCATCTTTCTCGATCTTTAACTTCTTCAAATTCAAAAGAGGTAGAAAGGAAGATCACAGCGACCACAGTGGCTGTTG
GGACGAGATGCCAAGATCGAGCAAGGTATGGCCGAGCGATGAGGACAAAATGCATCGTTGGGTAGCTGAACCTGGCATTGATAGAAAAGCTAAGGATTACATTGACAGGA
TCTATAGAAACCGTGTTCTTGAAACTGAGCGACAAACTGTTACTTTACCTGCAAGTGGAATAAAACTTGATCTAGGTAGAAAGGAAGATCACTGCAACTATAGTGGTTGT
TGGGACGAGATGCCAAGATCGAACAAGGTATGGCCGAGCGATGATGACAAAATACATCATTGGGTTGCTGAACCTGGCATTGATAGAAAAGCTAAAGATTACATTGACAG
GATCTATCGAAACCATGCTTTTGAATCTGAGCTACAAACTGTTACTTTACCTGCCAGTGGAACAAAACTCGATTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGCAACAATAGGTCGAAGAAAACTCACTCATCTTTCTCGATCTTTAACTTCTTCAAATTCAAAAGAGGTAGAAAGGAAGATCACAGCGACCACAGTGGCTGTTG
GGACGAGATGCCAAGATCGAGCAAGGTATGGCCGAGCGATGAGGACAAAATGCATCGTTGGGTAGCTGAACCTGGCATTGATAGAAAAGCTAAGGATTACATTGACAGGA
TCTATAGAAACCGTGTTCTTGAAACTGAGCGACAAACTGTTACTTTACCTGCAAGTGGAATAAAACTTGATCTAGGTAGAAAGGAAGATCACTGCAACTATAGTGGTTGT
TGGGACGAGATGCCAAGATCGAACAAGGTATGGCCGAGCGATGATGACAAAATACATCATTGGGTTGCTGAACCTGGCATTGATAGAAAAGCTAAAGATTACATTGACAG
GATCTATCGAAACCATGCTTTTGAATCTGAGCTACAAACTGTTACTTTACCTGCCAGTGGAACAAAACTCGATTTGTAA
Protein sequenceShow/hide protein sequence
MGGNNRSKKTHSSFSIFNFFKFKRGRKEDHSDHSGCWDEMPRSSKVWPSDEDKMHRWVAEPGIDRKAKDYIDRIYRNRVLETERQTVTLPASGIKLDLGRKEDHCNYSGC
WDEMPRSNKVWPSDDDKIHHWVAEPGIDRKAKDYIDRIYRNHAFESELQTVTLPASGTKLDL