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CmoCh09G012570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G012570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTMV resistance protein N-like
Genome locationCmo_Chr09:10945070..10945321
RNA-Seq ExpressionCmoCh09G012570
SyntenyCmoCh09G012570
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR000157 - Toll/interleukin-1 receptor homology (TIR) domain
IPR035897 - Toll/interleukin-1 receptor homology (TIR) domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592340.1 TMV resistance protein N, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4095.18Show/hide
Query:  MVSSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        MVSSRWCLEEL KIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKW HLLTKLANL+A PSEPW
Subjt:  MVSSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

KAG6592341.1 Disease resistance protein RUN1, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4095.06Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        SSRWCLEEL KIFECHDR+GM VLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANL+AWPSEPW
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

XP_022925450.1 TMV resistance protein N-like [Cucurbita moschata]1.3e-43100Show/hide
Query:  MVSSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        MVSSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
Subjt:  MVSSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

XP_023535312.1 TMV resistance protein N-like [Cucurbita pepo subsp. pepo]8.6e-4092.59Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        SSRWCLEEL KIFECHDR+GM VLPIFYRVDPS +RNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANL+AWPSEPW
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

XP_023535313.1 TMV resistance protein N-like [Cucurbita pepo subsp. pepo]8.6e-4092.59Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        SSRWCLEEL KIFECHDR+GM VLPIFYRVDPS +RNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANL+AWPSEPW
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

TrEMBL top hitse value%identityAlignment
A0A6J1EBI7 TMV resistance protein N-like2.3e-3891.36Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        SSRWCLEELSKIFECH R+GMTVLPIFY+VDPS VRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANL+AW  EPW
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

A0A6J1ECB1 TMV resistance protein N-like isoform X19.3e-4092.59Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        SSRWCLEEL KIFECHDR+GM VLPIFY+VDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANL+AWPSE W
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

A0A6J1EI05 TMV resistance protein N-like6.2e-44100Show/hide
Query:  MVSSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        MVSSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
Subjt:  MVSSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

A0A6J1EI44 TMV resistance protein N-like isoform X29.3e-4092.59Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        SSRWCLEEL KIFECHDR+GM VLPIFY+VDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANL+AWPSE W
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

A0A6J1I8R5 TMV resistance protein N-like4.0e-3586.42Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        SSRWCLEELSKIFECH R+GMTVLPIFY+VDPS VR QTGTFAEAFAKH+ RFGEHNPNIQKWR LLTKLANL+AW  EPW
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

SwissProt top hitse value%identityAlignment
A0A290U7C4 Disease resistance protein Roq12.2e-1446.58Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANL
        SS WCLEEL KI E H++  + V+P+FY VDPS VR Q G +A  F K +    +    + +WR  LTK+AN+
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANL

Q40392 TMV resistance protein N1.4e-1652.7Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLR
        +SRWCL EL KI EC  R   TV+PIFY VDPS VRNQ  +FA+AF +H+ ++ +    IQ+WR  L + ANL+
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLR

Q9FI14 Disease resistance protein TAO13.8e-1443.21Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        SS+WCL+EL +I +C + +G TV+ +FY VDPSDVR Q G F + F K     G     +Q+W+  LT  AN+    S  W
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

V9M2S5 Disease resistance protein RPV16.9e-1652Show/hide
Query:  SRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAW
        SRWCL+EL KI EC   +G  V PIFY VDPS VR Q G+F EAFA ++  + +    I +WR  LT+ ANL  W
Subjt:  SRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAW

V9M398 Disease resistance protein RUN12.6e-1553.75Show/hide
Query:  SRWCLEELSKIFECH---DRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEH-NPNIQKWRHLLTKLANLRAWP
        SRWCL+EL KI ECH      G  V PIFY VDPS VR Q G+F EAFA     +GE+    I +WR  LT+ ANL  WP
Subjt:  SRWCLEELSKIFECH---DRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEH-NPNIQKWRHLLTKLANLRAWP

Arabidopsis top hitse value%identityAlignment
AT2G20142.1 Toll-Interleukin-Resistance (TIR) domain family protein6.0e-1541.33Show/hide
Query:  SRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAW
        SRWCL+E+  I +C ++ G  V+P+ Y VDP D+ NQTG+F +AFAK + +  +    +Q+W+   T+  NL  W
Subjt:  SRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAW

AT3G44400.1 Disease resistance protein (TIR-NBS-LRR class) family4.6e-1540.74Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        SS WCL+EL++I +C + VG  V+ IFY V+P+D++ QTG F +AF K     G+   +I++WR  L  +A +  + S  W
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

AT3G44400.2 Disease resistance protein (TIR-NBS-LRR class) family4.6e-1540.74Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        SS WCL+EL++I +C + VG  V+ IFY V+P+D++ QTG F +AF K     G+   +I++WR  L  +A +  + S  W
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

AT3G44480.1 Disease resistance protein (TIR-NBS-LRR class) family4.6e-1540.74Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        SS WCL+EL++I +C   VG  V+ IFY VDP+D++ QTG F +AF K     G+    +++WR  L  +A +  + S  W
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW

AT5G44510.1 target of AVRB operation12.7e-1543.21Show/hide
Query:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW
        SS+WCL+EL +I +C + +G TV+ +FY VDPSDVR Q G F + F K     G     +Q+W+  LT  AN+    S  W
Subjt:  SSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTTCGAGGTGGTGCCTTGAGGAGCTGAGTAAGATCTTTGAATGCCACGACCGGGTTGGGATGACCGTGTTGCCCATCTTTTATAGAGTGGATCCTTCTGATGT
TCGGAACCAGACAGGAACATTTGCTGAAGCTTTTGCTAAACATCAACACAGATTTGGAGAACATAACCCCAACATCCAAAAATGGAGGCACCTTCTTACAAAGCTCGCCA
ACCTCAGGGCTTGGCCTTCCGAACCTTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCTTCGAGGTGGTGCCTTGAGGAGCTGAGTAAGATCTTTGAATGCCACGACCGGGTTGGGATGACCGTGTTGCCCATCTTTTATAGAGTGGATCCTTCTGATGT
TCGGAACCAGACAGGAACATTTGCTGAAGCTTTTGCTAAACATCAACACAGATTTGGAGAACATAACCCCAACATCCAAAAATGGAGGCACCTTCTTACAAAGCTCGCCA
ACCTCAGGGCTTGGCCTTCCGAACCTTGGTAA
Protein sequenceShow/hide protein sequence
MVSSRWCLEELSKIFECHDRVGMTVLPIFYRVDPSDVRNQTGTFAEAFAKHQHRFGEHNPNIQKWRHLLTKLANLRAWPSEPW