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CmoCh09G012580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G012580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioninositol transporter 4-like isoform X2
Genome locationCmo_Chr09:10949319..10949858
RNA-Seq ExpressionCmoCh09G012580
SyntenyCmoCh09G012580
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsIPR025314 - Domain of unknown function DUF4219


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEU85354.1 hypothetical protein [Tanacetum cinerariifolium]6.6e-4560.67Show/hide
Query:  SMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTMHVGVEHVKKVKVQ
        S  +GKE SVTL+Y +LTK+NY+ W IKM VNLQAQG+WDA + + +E+R+DRM L AIYQAI ED+LLMLA+K++ K  WETL TMH+G E VK+ K+Q
Subjt:  SMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTMHVGVEHVKKVKVQ

Query:  TLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRA
        TL+S+FE IRMKD  S+++F M+L  I++GI SLG+ +EEI++VKKF RA
Subjt:  TLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRA

GEW87862.1 hypothetical protein [Tanacetum cinerariifolium]5.0e-4559.87Show/hide
Query:  SMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTMHVGVEHVKKVKVQ
        S  +GKE SVTL+Y +LTK+NY+ W IKM VNLQAQG+WDA + + +++R+DRM L AIYQAI ED+LLML +K++ K  WETL+T+H+G E VK+ KVQ
Subjt:  SMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTMHVGVEHVKKVKVQ

Query:  TLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP
        TL S+FE IRMKD ES+++F M+L  I++GI SLG+ +EEI++VKKF RA P
Subjt:  TLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP

XP_020585663.1 uncharacterized protein LOC110028241 [Phalaenopsis equestris]2.0e-4660.61Show/hide
Query:  MSSPHKVAGEDMTSMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTM
        MSSP +    DM   K GKE +VTL Y LLTKSNY+ W +KM VNLQAQG+W+ +E D++EERKDRM L AIYQA+ ED+LLM+AEK+S K  WETL+TM
Subjt:  MSSPHKVAGEDMTSMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTM

Query:  HVGVEHVKKVKVQTLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP
        HVGVE VK+ KVQTLR+ FEAIRMKDGE+++DF MKL  I++           +S+VKKF RA P
Subjt:  HVGVEHVKKVKVQTLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP

XP_022955160.1 inositol transporter 4-like isoform X2 [Cucurbita moschata]5.9e-5470.91Show/hide
Query:  MSSPHKVAGEDMTSMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTM
        MSSP KV   ++T +KSGKE SV LQY LLTKSNYT W IKM VNLQAQG+WD IEH DIEE KDRM   AIYQA+ EDILLMLAEK+S KA+WETLQ M
Subjt:  MSSPHKVAGEDMTSMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTM

Query:  HVGVEHVKKVKVQTLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP
        HV    VK+ KVQTL+SEFEAIRMK+GESI+DF+MKL +I+SGI S+G+ VEEI +VKKF RA P
Subjt:  HVGVEHVKKVKVQTLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP

XP_022955161.1 inositol transporter 4-like isoform X3 [Cucurbita moschata]5.9e-5470.91Show/hide
Query:  MSSPHKVAGEDMTSMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTM
        MSSP KV   ++T +KSGKE SV LQY LLTKSNYT W IKM VNLQAQG+WD IEH DIEE KDRM   AIYQA+ EDILLMLAEK+S KA+WETLQ M
Subjt:  MSSPHKVAGEDMTSMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTM

Query:  HVGVEHVKKVKVQTLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP
        HV    VK+ KVQTL+SEFEAIRMK+GESI+DF+MKL +I+SGI S+G+ VEEI +VKKF RA P
Subjt:  HVGVEHVKKVKVQTLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP

TrEMBL top hitse value%identityAlignment
A0A0A9DE89 CCHC-type domain-containing protein1.7e-3855.41Show/hide
Query:  EDMTSMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIE-HDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTMHVGVEHVK
        +D  +    KE SVTLQY LLT+SNYT+W I M   L+AQG+W+AI+   DI+ RKD+M L AIYQ I E+ILL+L EK + K  W+ L+TMH+GV+ V 
Subjt:  EDMTSMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIE-HDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTMHVGVEHVK

Query:  KVKVQTLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP
        + KVQTL+SE + +RMK+GESI+DF MKL  IIS I +LG KV+E  +VKK  R  P
Subjt:  KVKVQTLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP

A0A6J1EU16 uncharacterized protein LOC1114365743.1e-4069.6Show/hide
Query:  MCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTMHVGVEHVKKVKVQTLRSEFEAIRMKDGESIEDFTMKLMMII
        M VNLQA+ +WD +EH D+E  KDRM L+AIYQAI +D+LLMLAEK+S KA WETLQ MH+GVE V + KVQTL+SEFEAIRMKDGESI+DFTMKL  ++
Subjt:  MCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTMHVGVEHVKKVKVQTLRSEFEAIRMKDGESIEDFTMKLMMII

Query:  SGIHSLGNKVEEISIVKKFHRACPP
        SGI SLG+ VEEIS+VKKF  A  P
Subjt:  SGIHSLGNKVEEISIVKKFHRACPP

A0A6J1GT03 inositol transporter 4-like isoform X32.9e-5470.91Show/hide
Query:  MSSPHKVAGEDMTSMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTM
        MSSP KV   ++T +KSGKE SV LQY LLTKSNYT W IKM VNLQAQG+WD IEH DIEE KDRM   AIYQA+ EDILLMLAEK+S KA+WETLQ M
Subjt:  MSSPHKVAGEDMTSMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTM

Query:  HVGVEHVKKVKVQTLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP
        HV    VK+ KVQTL+SEFEAIRMK+GESI+DF+MKL +I+SGI S+G+ VEEI +VKKF RA P
Subjt:  HVGVEHVKKVKVQTLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP

A0A6J1GUE5 inositol transporter 4-like isoform X22.9e-5470.91Show/hide
Query:  MSSPHKVAGEDMTSMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTM
        MSSP KV   ++T +KSGKE SV LQY LLTKSNYT W IKM VNLQAQG+WD IEH DIEE KDRM   AIYQA+ EDILLMLAEK+S KA+WETLQ M
Subjt:  MSSPHKVAGEDMTSMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTM

Query:  HVGVEHVKKVKVQTLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP
        HV    VK+ KVQTL+SEFEAIRMK+GESI+DF+MKL +I+SGI S+G+ VEEI +VKKF RA P
Subjt:  HVGVEHVKKVKVQTLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACP

A0A6L2NLF6 Integrase catalytic domain-containing protein3.2e-4560.67Show/hide
Query:  SMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTMHVGVEHVKKVKVQ
        S  +GKE SVTL+Y +LTK+NY+ W IKM VNLQAQG+WDA + + +E+R+DRM L AIYQAI ED+LLMLA+K++ K  WETL TMH+G E VK+ K+Q
Subjt:  SMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTMHVGVEHVKKVKVQ

Query:  TLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRA
        TL+S+FE IRMKD  S+++F M+L  I++GI SLG+ +EEI++VKKF RA
Subjt:  TLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48720.1 unknown protein1.6e-0429.55Show/hide
Query:  SVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIE------------------ERKDRMTLTAIYQAILEDILLMLAEKNSTK
        +V  Q  +LTKSNY  W+++M   L A  +W+ +E   IE                   ++D+  L  IYQ + ED    + E  S K
Subjt:  SVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIE------------------ERKDRMTLTAIYQAILEDILLMLAEKNSTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCACCACACAAAGTTGCAGGAGAAGATATGACATCAATGAAAAGCGGAAAGGAGAGGAGTGTAACGCTCCAGTACTCATTACTCACGAAGAGTAACTACACAAC
ATGGACGATAAAGATGTGTGTCAACTTACAGGCACAAGGCATATGGGATGCCATTGAGCATGATGACATTGAGGAGCGTAAGGATAGGATGACTCTTACTGCTATCTACC
AAGCAATTCTAGAGGACATCCTTCTCATGTTAGCAGAGAAGAACTCGACAAAGGCAGTGTGGGAGACATTGCAAACAATGCATGTGGGTGTGGAACATGTCAAGAAAGTA
AAGGTGCAAACCTTGAGGAGTGAGTTCGAGGCTATACGCATGAAGGATGGTGAATCAATAGAGGACTTTACCATGAAGTTGATGATGATCATTAGTGGAATCCATTCATT
AGGCAACAAAGTGGAGGAGATCTCCATCGTCAAGAAGTTCCATCGAGCTTGTCCCCCCGAGATTCATGCAGATTGTTACCTCCATCGAGCTGCTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCACCACACAAAGTTGCAGGAGAAGATATGACATCAATGAAAAGCGGAAAGGAGAGGAGTGTAACGCTCCAGTACTCATTACTCACGAAGAGTAACTACACAAC
ATGGACGATAAAGATGTGTGTCAACTTACAGGCACAAGGCATATGGGATGCCATTGAGCATGATGACATTGAGGAGCGTAAGGATAGGATGACTCTTACTGCTATCTACC
AAGCAATTCTAGAGGACATCCTTCTCATGTTAGCAGAGAAGAACTCGACAAAGGCAGTGTGGGAGACATTGCAAACAATGCATGTGGGTGTGGAACATGTCAAGAAAGTA
AAGGTGCAAACCTTGAGGAGTGAGTTCGAGGCTATACGCATGAAGGATGGTGAATCAATAGAGGACTTTACCATGAAGTTGATGATGATCATTAGTGGAATCCATTCATT
AGGCAACAAAGTGGAGGAGATCTCCATCGTCAAGAAGTTCCATCGAGCTTGTCCCCCCGAGATTCATGCAGATTGTTACCTCCATCGAGCTGCTCATTGA
Protein sequenceShow/hide protein sequence
MSSPHKVAGEDMTSMKSGKERSVTLQYSLLTKSNYTTWTIKMCVNLQAQGIWDAIEHDDIEERKDRMTLTAIYQAILEDILLMLAEKNSTKAVWETLQTMHVGVEHVKKV
KVQTLRSEFEAIRMKDGESIEDFTMKLMMIISGIHSLGNKVEEISIVKKFHRACPPEIHADCYLHRAAH