| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_022925403.1 RNA-binding protein 7-like [Cucurbita moschata] | 3.0e-107 | 100 | Show/hide |
Query: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNIS
MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNIS
Subjt: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNIS
Query: HKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHELLN
HKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHELLN
Subjt: HKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHELLN
|
|
| XP_022932504.1 RNA-binding protein 7 isoform X1 [Cucurbita moschata] | 6.7e-83 | 80.69 | Show/hide |
Query: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
MSGR SN CT+Y+GNLDERVSD+VLYDILIQAGRVVDLHIPRDKESG+P+G+AFAEYENE+ITNYA+KLFSGLVTLHNRTLKFAVSGQDKPSPS S
Subjt: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
Query: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHEL
SSNISHKSRS IV YSNE S YSNRLS SCRFSAYPENH EA +PGLVNQ NGYG + D++NN++SQRYS T LDSF KSRRHDTSYPVYYPP+EL
Subjt: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHEL
Query: LN
LN
Subjt: LN
|
|
| XP_022973396.1 RNA-binding protein 7-like isoform X1 [Cucurbita maxima] | 5.1e-83 | 80.69 | Show/hide |
Query: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
MSGR SN CT+Y+GNLDERVSD+VLYDILIQAGRVVDLHIPRDKESG+P+G+AFAEYENE+ITNYA+KLFSGLVTLHNRTLKFAVSGQDKPSPS S
Subjt: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
Query: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHEL
SSNISHKSRS IV YSNE S YSNRLS SCRFSAYPENH EA +PGLVNQ NGYG + D++NN++SQRYS T LDSF KSRRHDTSYPVYYPP+EL
Subjt: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHEL
Query: LN
LN
Subjt: LN
|
|
| XP_022973532.1 RNA-binding protein 7-like isoform X1 [Cucurbita maxima] | 5.6e-98 | 93.43 | Show/hide |
Query: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
MSGRSSNRCTLYVGNLDERV+DKVLYDILIQAGRVVDLH+PRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS S
Subjt: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
Query: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPH
SSNISHKSRSHIVS+YSNETSQYSNRLSTSCRFSAYPENH+EALL+PGLV+QYNG GFHLDNYNNE SQRYSRTTLDSFYQTKSRRHDTSYPVYYPPH
Subjt: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPH
|
|
| XP_023535522.1 splicing factor 3B subunit 4-like isoform X1 [Cucurbita pepo subsp. pepo] | 1.4e-93 | 99.44 | Show/hide |
Query: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNIS
MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNIS
Subjt: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNIS
Query: HKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQT
HKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNE+SQRYSRTTLDSFYQT
Subjt: HKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQT
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1CKW6 RNA-binding protein 7 | 1.7e-79 | 77.72 | Show/hide |
Query: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
MSGR SN CT+YVGNLD+RVSD+VLYDILIQAGR+VDLHIPRDKESGKPKG+AFAEYE+E+I NYA+KLFSGLV LHNR LKFAVSGQDKPSPS S
Subjt: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
Query: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHEL
SSNISHK RS V YS+E SQYSNRLSTSCRFSAYPENH EA L+PGLVNQ NGYG H+ NYNNE+SQRY TTLDSF ++ RR++TS PVYYPP+E
Subjt: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHEL
Query: LN
LN
Subjt: LN
|
|
| A0A6J1EF34 RNA-binding protein 7-like | 1.4e-107 | 100 | Show/hide |
Query: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNIS
MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNIS
Subjt: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNIS
Query: HKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHELLN
HKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHELLN
Subjt: HKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHELLN
|
|
| A0A6J1EX61 RNA-binding protein 7 isoform X1 | 3.2e-83 | 80.69 | Show/hide |
Query: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
MSGR SN CT+Y+GNLDERVSD+VLYDILIQAGRVVDLHIPRDKESG+P+G+AFAEYENE+ITNYA+KLFSGLVTLHNRTLKFAVSGQDKPSPS S
Subjt: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
Query: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHEL
SSNISHKSRS IV YSNE S YSNRLS SCRFSAYPENH EA +PGLVNQ NGYG + D++NN++SQRYS T LDSF KSRRHDTSYPVYYPP+EL
Subjt: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHEL
Query: LN
LN
Subjt: LN
|
|
| A0A6J1I7S0 RNA-binding protein 7-like isoform X1 | 2.7e-98 | 93.43 | Show/hide |
Query: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
MSGRSSNRCTLYVGNLDERV+DKVLYDILIQAGRVVDLH+PRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS S
Subjt: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
Query: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPH
SSNISHKSRSHIVS+YSNETSQYSNRLSTSCRFSAYPENH+EALL+PGLV+QYNG GFHLDNYNNE SQRYSRTTLDSFYQTKSRRHDTSYPVYYPPH
Subjt: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPH
|
|
| A0A6J1I8J0 RNA-binding protein 7-like isoform X1 | 2.5e-83 | 80.69 | Show/hide |
Query: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
MSGR SN CT+Y+GNLDERVSD+VLYDILIQAGRVVDLHIPRDKESG+P+G+AFAEYENE+ITNYA+KLFSGLVTLHNRTLKFAVSGQDKPSPS S
Subjt: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPS-----S
Query: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHEL
SSNISHKSRS IV YSNE S YSNRLS SCRFSAYPENH EA +PGLVNQ NGYG + D++NN++SQRYS T LDSF KSRRHDTSYPVYYPP+EL
Subjt: SSNISHKSRSHIVSDYSNETSQYSNRLSTSCRFSAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRHDTSYPVYYPPHEL
Query: LN
LN
Subjt: LN
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O14102 Spliceosome-associated protein 49 | 2.4e-11 | 38.27 | Show/hide |
Query: TLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDK
T+Y+GNLDE+V+D +L+++ +QAG VV++HIPRD+ GF F E+ +E YA ++ + V L + ++ + QD+
Subjt: TLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDK
|
|
| Q09442 Splicing factor 3B subunit 4 | 5.4e-11 | 33.33 | Show/hide |
Query: TLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNI
T+YVG LDE+VS+ +L+++++QAG VV +++P+D+ + +GF F E+ E+ +YAIK+ + ++ L+ + +K + + + +NI
Subjt: TLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNI
|
|
| Q15427 Splicing factor 3B subunit 4 | 3.2e-11 | 38.36 | Show/hide |
Query: TLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLK
T+YVG LDE+VS+ +L+++ +QAG VV+ H+P+D+ +G+ +G+ F E+ +E+ +YAIK+ + ++ L+ + ++
Subjt: TLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLK
|
|
| Q6AYL5 Splicing factor 3B subunit 4 | 3.2e-11 | 38.36 | Show/hide |
Query: TLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLK
T+YVG LDE+VS+ +L+++ +QAG VV+ H+P+D+ +G+ +G+ F E+ +E+ +YAIK+ + ++ L+ + ++
Subjt: TLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLK
|
|
| Q8QZY9 Splicing factor 3B subunit 4 | 3.2e-11 | 38.36 | Show/hide |
Query: TLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLK
T+YVG LDE+VS+ +L+++ +QAG VV+ H+P+D+ +G+ +G+ F E+ +E+ +YAIK+ + ++ L+ + ++
Subjt: TLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLK
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G71800.1 cleavage stimulating factor 64 | 3.7e-07 | 37.7 | Show/hide |
Query: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENED
M+ SS R ++VGN+ +++ L +I + G VV + D+E+GKPKG+ F EY++E+
Subjt: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENED
|
|
| AT2G18510.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 7.8e-13 | 31.63 | Show/hide |
Query: SGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNI
S + T+YVG LD ++S+++L+++ +QAG VV++++P+D+ + + + F EY +E+ +YAIK+ + ++ LH + ++ + QDK S +N+
Subjt: SGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNI
|
|
| AT3G47120.1 RNA recognition motif (RRM)-containing protein | 8.3e-07 | 31.63 | Show/hide |
Query: NRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNISHKSR
N +YVG + +++ L + Q G +VD+++ RDK +GK KGFAF YE++ T A+ +G + L RT+K G K ++R
Subjt: NRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNISHKSR
|
|
| AT4G10110.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.6e-37 | 48.39 | Show/hide |
Query: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNIS
MSG S+ CT+Y+GN+DERVSD+VLYDI+IQAGRV+DLHIPRDKE+ KPKGFAFAEYE E+I +YA+KLFSGLV+L+NRTLKFA+SGQDK S+S+N
Subjt: MSGRSSNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSGLVTLHNRTLKFAVSGQDKPSPSSSSNIS
Query: HKSRSHIVSDYSNETSQYSNRLSTSCRF----SAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRH
H++R ++ ++ + Y + S + S P ++ + PG+ N + E+S+R + LDS ++ RR+
Subjt: HKSRSHIVSDYSNETSQYSNRLSTSCRF----SAYPENHREALLHPGLVNQYNGYGFHLDNYNNEHSQRYSRTTLDSFYQTKSRRH
|
|
| AT5G64200.1 ortholog of human splicing factor SC35 | 7.1e-06 | 29.55 | Show/hide |
Query: SNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSG-LVTLHNRTLKFAVSGQDKPSPSSSSNISHKSR
S+ +L V N+ R + LY + + G+VVD+ IPRD+ +G +GFAF Y+ +D + A++ G +V T++FA G + S + +
Subjt: SNRCTLYVGNLDERVSDKVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYENEDITNYAIKLFSG-LVTLHNRTLKFAVSGQDKPSPSSSSNISHKSR
Query: SHIVSDYSNETSQYSNRLSTSCRFSAYPENHR
S + S R S S R S P R
Subjt: SHIVSDYSNETSQYSNRLSTSCRFSAYPENHR
|
|
