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CmoCh09G013160 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G013160
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionankyrin repeat-containing protein BDA1-like
Genome locationCmo_Chr09:11887125..11887584
RNA-Seq ExpressionCmoCh09G013160
SyntenyCmoCh09G013160
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002110 - Ankyrin repeat
IPR020683 - Ankyrin repeat-containing domain
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592383.1 Ankyrin repeat-containing protein BDA1, partial [Cucurbita argyrosperma subsp. sororia]6.2e-3464.19Show/hide
Query:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD
        M ANGE+NELRLAISS+EES RKLYEASKI SIQSLKTLIR                  P + S             NL PEL  EVD +QRTP HLAS+
Subjt:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD

Query:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR
        NG VEIVQALLEKNTSTCMV DLNGLIPLHHAVING+IDI+Q LI  R
Subjt:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR

XP_022925439.1 ankyrin repeat-containing protein BDA1-like [Cucurbita moschata]4.7e-3464.86Show/hide
Query:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD
        M ANGE+NELRLAISS EES RKLYEASKI SIQSLKTLIR                  P + S             NL PEL  EVD +QRTP HLAS+
Subjt:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD

Query:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR
        NG VEIVQALLEKNTSTCMV DLNGLIPLHHAVING+IDIIQ LI  R
Subjt:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR

XP_022973934.1 ankyrin repeat-containing protein BDA1-like [Cucurbita maxima]2.0e-3262.84Show/hide
Query:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD
        M AN E+N+LRLAISS EES RKLYEASKI SIQSLKTLIR                  P + S             NL PEL  EVD +QRTP HLAS+
Subjt:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD

Query:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR
        NG VEIVQALLEKNTSTCMV DLNGLIPLHHAVING+IDI+Q LI  R
Subjt:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR

XP_023521954.1 ankyrin repeat-containing protein At5g02620-like, partial [Cucurbita pepo subsp. pepo]1.1e-3364.19Show/hide
Query:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD
        M ANGE+NELRLAISS EES RKLYEASKI SIQSLKTLIR                  P + S             NL PEL  EVD +QRTP HLAS+
Subjt:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD

Query:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR
        NG VEIVQALLEKNTSTCMV DLNGLIPLHHAVING+IDI+Q LI  R
Subjt:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR

XP_023535332.1 alpha-latrocrustotoxin-Lt1a-like [Cucurbita pepo subsp. pepo]5.2e-3363.51Show/hide
Query:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD
        M ANGE+NELRLAISS EES RKLYEASKI SIQSLKTLIR                  P + S             NL PEL  EVD +QRTP HLAS+
Subjt:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD

Query:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR
        NG VEIVQALLEKNTSTCMV DLNG IPLHHAVING+IDI+Q LI  R
Subjt:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR

TrEMBL top hitse value%identityAlignment
A0A6J1D887 ankyrin repeat-containing protein NPR4-like5.5e-2855.1Show/hide
Query:  ANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIRPKYH---------SKN----------------------LNPELVREVDVVQRTPPHLASDN
        ANGE+ E+R+ +   EE+ RKLYEASKI SIQSL+TLI+   H         S N                      L PEL  EVD +QRTP HLAS N
Subjt:  ANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIRPKYH---------SKN----------------------LNPELVREVDVVQRTPPHLASDN

Query:  GAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR
        G VEIVQALLEKNTS C+V DLNGLIPLHHAVI+GQI+I+Q LI+ R
Subjt:  GAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR

A0A6J1EC63 ankyrin repeat-containing protein BDA1-like2.3e-3464.86Show/hide
Query:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD
        M ANGE+NELRLAISS EES RKLYEASKI SIQSLKTLIR                  P + S             NL PEL  EVD +QRTP HLAS+
Subjt:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD

Query:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR
        NG VEIVQALLEKNTSTCMV DLNGLIPLHHAVING+IDIIQ LI  R
Subjt:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR

A0A6J1EC78 uncharacterized protein LOC1114327355.5e-2860.87Show/hide
Query:  RLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASDNGAVEIVQAL
        RL I +IEES RKLYEASKI SIQSLKTLIR                  P Y S             NL P+L  +VD +QRTP HLAS NG +EIVQAL
Subjt:  RLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASDNGAVEIVQAL

Query:  LEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR
        LEKNTSTCMV DLNGLIPLHHAVING+IDIIQ LI  R
Subjt:  LEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR

A0A6J1EHZ5 ankyrin repeat domain-containing protein 16-like4.3e-2561.02Show/hide
Query:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIRPKYHSKNLNPELVREVDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVHDLNGLIPLH
        M  NGE N+ RLA    E S++K          Q L   +    +  NL P+L  EVD +QRTP HLAS+NG VEIVQALLEKNTSTCMV DLNGLIPLH
Subjt:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIRPKYHSKNLNPELVREVDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVHDLNGLIPLH

Query:  HAVINGQIDIIQLLINVR
        HAVINGQIDII LLIN R
Subjt:  HAVINGQIDIIQLLINVR

A0A6J1IG24 ankyrin repeat-containing protein BDA1-like9.6e-3362.84Show/hide
Query:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD
        M AN E+N+LRLAISS EES RKLYEASKI SIQSLKTLIR                  P + S             NL PEL  EVD +QRTP HLAS+
Subjt:  MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR------------------PKYHS------------KNLNPELVREVDVVQRTPPHLASD

Query:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR
        NG VEIVQALLEKNTSTCMV DLNGLIPLHHAVING+IDI+Q LI  R
Subjt:  NGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVR

SwissProt top hitse value%identityAlignment
Q6P9K8 Caskin-19.0e-0442.42Show/hide
Query:  VDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVH-------DLNGLIPLHHAVINGQIDIIQLLI
        VD   +TP  LA + G V +VQ LL  N    ++        D NG  PLH A  NG IDII+LL+
Subjt:  VDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVH-------DLNGLIPLHHAVINGQIDIIQLLI

Q8VHK2 Caskin-19.0e-0442.42Show/hide
Query:  VDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVH-------DLNGLIPLHHAVINGQIDIIQLLI
        VD   +TP  LA + G V +VQ LL  N    ++        D NG  PLH A  NG IDII+LL+
Subjt:  VDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVH-------DLNGLIPLHHAVINGQIDIIQLLI

Q8WXD9 Caskin-19.0e-0442.42Show/hide
Query:  VDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVH-------DLNGLIPLHHAVINGQIDIIQLLI
        VD   +TP  LA + G V +VQ LL  N    ++        D NG  PLH A  NG IDII+LL+
Subjt:  VDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVH-------DLNGLIPLHHAVINGQIDIIQLLI

Arabidopsis top hitse value%identityAlignment
AT1G07710.1 Ankyrin repeat family protein5.4e-0435.94Show/hide
Query:  ELVREVDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLI
        EL   VD+   T  H A+  G  E+V  LLE  +S   +   NG   LH A  NG + +I+ L+
Subjt:  ELVREVDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDIIQLLI

AT4G10720.1 Ankyrin repeat family protein9.3e-0428.12Show/hide
Query:  NLNPELVREVDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDII
        NL P   R+++    +P HLA + G   +V +LL+ ++    +    G+ P H  V  G+ D++
Subjt:  NLNPELVREVDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDII

AT5G02620.1 ankyrin-like17.1e-0430.36Show/hide
Query:  LAISSIEESIRKLYEASKIESIQSLKTLIRPKYHSKNLNPELVREVDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDII
        LA +  +      + A+K  ++Q L  LI         NPEL    D  + T  H A+  G  EIV  LL+K      +   NG   LH A  NG   I+
Subjt:  LAISSIEESIRKLYEASKIESIQSLKTLIRPKYHSKNLNPELVREVDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDII

Query:  QLLINVRGAWFT
        + LI  +    T
Subjt:  QLLINVRGAWFT

AT5G54710.1 Ankyrin repeat family protein1.1e-0435.94Show/hide
Query:  PELVREVDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVH--DLNGLIPLHHAVINGQIDIIQ
        P L+ + D  Q T  H A  +G +E+ + LL+ + +  +    D +GL PLH AVING ++I++
Subjt:  PELVREVDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVH--DLNGLIPLHHAVINGQIDIIQ

AT5G60070.1 ankyrin repeat family protein5.4e-0422.06Show/hide
Query:  EDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR-------------PKYHSKNLNPELVREVDVVQR--------TPPHLASDNGAVEIVQALLEKN
        ED++L  A+   + S  K   ++ +ES   L+ L+R              +Y   ++  EL++  D+            P H+A+  G +++++ L+E++
Subjt:  EDNELRLAISSIEESIRKLYEASKIESIQSLKTLIR-------------PKYHSKNLNPELVREVDVVQR--------TPPHLASDNGAVEIVQALLEKN

Query:  TSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVRGA
            M  DL+    LH A   G +++++ L+   G+
Subjt:  TSTCMVHDLNGLIPLHHAVINGQIDIIQLLINVRGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCAAATGGAGAAGACAACGAGCTTAGATTAGCCATTTCCTCTATTGAAGAAAGTATAAGAAAGCTCTATGAAGCATCAAAGATTGAGTCAATTCAAAGCTTGAA
GACACTAATTCGACCCAAATATCATTCAAAGAATCTCAATCCTGAACTTGTTAGGGAAGTTGATGTCGTGCAAAGGACACCTCCACACTTGGCTTCAGACAATGGAGCGG
TTGAGATTGTTCAAGCTTTGCTAGAGAAGAACACAAGCACTTGCATGGTTCACGATTTGAATGGGTTGATTCCTCTCCACCATGCAGTGATTAATGGGCAAATTGATATC
ATCCAACTGTTAATCAATGTGCGAGGTGCATGGTTCACGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCAAATGGAGAAGACAACGAGCTTAGATTAGCCATTTCCTCTATTGAAGAAAGTATAAGAAAGCTCTATGAAGCATCAAAGATTGAGTCAATTCAAAGCTTGAA
GACACTAATTCGACCCAAATATCATTCAAAGAATCTCAATCCTGAACTTGTTAGGGAAGTTGATGTCGTGCAAAGGACACCTCCACACTTGGCTTCAGACAATGGAGCGG
TTGAGATTGTTCAAGCTTTGCTAGAGAAGAACACAAGCACTTGCATGGTTCACGATTTGAATGGGTTGATTCCTCTCCACCATGCAGTGATTAATGGGCAAATTGATATC
ATCCAACTGTTAATCAATGTGCGAGGTGCATGGTTCACGATTTGA
Protein sequenceShow/hide protein sequence
MGANGEDNELRLAISSIEESIRKLYEASKIESIQSLKTLIRPKYHSKNLNPELVREVDVVQRTPPHLASDNGAVEIVQALLEKNTSTCMVHDLNGLIPLHHAVINGQIDI
IQLLINVRGAWFTI