; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh09G013170 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G013170
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionankyrin repeat-containing protein BDA1-like
Genome locationCmo_Chr09:11891711..11892746
RNA-Seq ExpressionCmoCh09G013170
SyntenyCmoCh09G013170
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002110 - Ankyrin repeat
IPR020683 - Ankyrin repeat-containing domain
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592383.1 Ankyrin repeat-containing protein BDA1, partial [Cucurbita argyrosperma subsp. sororia]6.1e-5892.68Show/hide
Query:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI
        L  GDPNIIQRVLISSSN ESPLH SVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNG IPLHHA+INGRI
Subjt:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI

Query:  DIMQRLIIARPRSPWVKLHNGQS
        DIMQRLIIAR RSPW+KLHNGQ+
Subjt:  DIMQRLIIARPRSPWVKLHNGQS

XP_022925439.1 ankyrin repeat-containing protein BDA1-like [Cucurbita moschata]8.9e-5791.87Show/hide
Query:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI
        L  GDPNIIQRVLISSSNVESPLH SVLHHHLEFT+FLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNG IPLHHA+INGRI
Subjt:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI

Query:  DIMQRLIIARPRSPWVKLHNGQS
        DI+QRLIIARPRSPWVKL+N Q+
Subjt:  DIMQRLIIARPRSPWVKLHNGQS

XP_022973934.1 ankyrin repeat-containing protein BDA1-like [Cucurbita maxima]1.9e-5995.12Show/hide
Query:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI
        L  GDPNIIQRVLISSSNVESPLH SVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNG IPLHHA+INGRI
Subjt:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI

Query:  DIMQRLIIARPRSPWVKLHNGQS
        DIMQRLIIARPRSPWVKLHNGQ+
Subjt:  DIMQRLIIARPRSPWVKLHNGQS

XP_023521954.1 ankyrin repeat-containing protein At5g02620-like, partial [Cucurbita pepo subsp. pepo]6.1e-5892.68Show/hide
Query:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI
        L  GDPNIIQRVLISSSN ESPLH SVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNG IPLHHA+INGRI
Subjt:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI

Query:  DIMQRLIIARPRSPWVKLHNGQS
        DIMQRLIIAR RSPW+KLHNGQ+
Subjt:  DIMQRLIIARPRSPWVKLHNGQS

XP_023535332.1 alpha-latrocrustotoxin-Lt1a-like [Cucurbita pepo subsp. pepo]4.7e-5892.68Show/hide
Query:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI
        L  GDPNIIQRVLISSSN ESPLH SVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNG+IPLHHA+INGRI
Subjt:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI

Query:  DIMQRLIIARPRSPWVKLHNGQS
        DIMQRLIIAR RSPW+KLHNGQ+
Subjt:  DIMQRLIIARPRSPWVKLHNGQS

TrEMBL top hitse value%identityAlignment
A0A6J1D887 ankyrin repeat-containing protein NPR4-like1.1e-4479.17Show/hide
Query:  DPNIIQRVLI-SSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIM
        DP+IIQ+VLI SSSN ESPLH SVLH  LEFTRFLL+L PELAGEVD LQRTPLHLAS NG VEIVQALLEKNTS C+VRDLNG IPLHHA+I+G+I+IM
Subjt:  DPNIIQRVLI-SSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIM

Query:  QRLIIARPRSPWVKLHNGQS
        Q LI ARP+S W KLHNGQ+
Subjt:  QRLIIARPRSPWVKLHNGQS

A0A6J1EBP6 ankyrin repeat-containing protein BDA1-like1.1e-4475.61Show/hide
Query:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI
        L   + NIIQRVLISS N+E+PL+ SVLH HLEFT+FLLNL+PELAGEV  LQRTPLHLASENGTVE+VQALLEKNTST +VRDLNG IPLHHA++NGRI
Subjt:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI

Query:  DIMQRLIIARPRSPWVKLHNGQS
        DIMQRLI  RP+S W+K HN ++
Subjt:  DIMQRLIIARPRSPWVKLHNGQS

A0A6J1EC63 ankyrin repeat-containing protein BDA1-like4.3e-5791.87Show/hide
Query:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI
        L  GDPNIIQRVLISSSNVESPLH SVLHHHLEFT+FLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNG IPLHHA+INGRI
Subjt:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI

Query:  DIMQRLIIARPRSPWVKLHNGQS
        DI+QRLIIARPRSPWVKL+N Q+
Subjt:  DIMQRLIIARPRSPWVKLHNGQS

A0A6J1EC78 uncharacterized protein LOC1114327351.2e-5488.62Show/hide
Query:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI
        L  GDPNII+RVLISSSNVESPL+ SVLH HLEFT FLLNLVP+LAG+VDDLQRTPLHLAS NGT+EIVQALLEKNTSTCMVRDLNG IPLHHA+INGRI
Subjt:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI

Query:  DIMQRLIIARPRSPWVKLHNGQS
        DI+QRLIIARPRSPWVKLHNGQS
Subjt:  DIMQRLIIARPRSPWVKLHNGQS

A0A6J1IG24 ankyrin repeat-containing protein BDA1-like9.2e-6095.12Show/hide
Query:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI
        L  GDPNIIQRVLISSSNVESPLH SVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNG IPLHHA+INGRI
Subjt:  LALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRI

Query:  DIMQRLIIARPRSPWVKLHNGQS
        DIMQRLIIARPRSPWVKLHNGQ+
Subjt:  DIMQRLIIARPRSPWVKLHNGQS

SwissProt top hitse value%identityAlignment
Q04861 Nuclear factor NF-kappa-B p105 subunit6.7e-0730.58Show/hide
Query:  IQRVL--ISSSNVESPLHASVLHHHLEFTRFLLNLVPE-----LAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRID
        +QR L  +   N ++ LH S++H H E  + LL ++P+     +    +DL +TPLHLA      E+V+ LL+   +  ++ D +G   LH A   G   
Subjt:  IQRVL--ISSSNVESPLHASVLHHHLEFTRFLLNLVPE-----LAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRID

Query:  IMQRLIIARPRSPWVKLHNGQ
        I+  L+  +  S  + L NG+
Subjt:  IMQRLIIARPRSPWVKLHNGQ

Q6P9K8 Caskin-11.5e-0636.19Show/hide
Query:  VLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVR-------DLNGFIPLHHAMINGRIDIMQ
        V + S     PLH +  H H + +  LL         VD+  +TPL LA E G V +VQ LL  N    ++        D NG  PLH A  NG IDI++
Subjt:  VLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVR-------DLNGFIPLHHAMINGRIDIMQ

Query:  RLIIA
         L+ A
Subjt:  RLIIA

Q8GYH5 Ankyrin repeat-containing protein BDA17.9e-0830.56Show/hide
Query:  PNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQR
        P+I+Q+V +    + +PLH +     L+    L+ L P  A ++++   +PLHLA EN  VE+   L++ + S   +R   G  PLH     G +D++  
Subjt:  PNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQR

Query:  LIIARPRS
         ++A P S
Subjt:  LIIARPRS

Q8WXD9 Caskin-11.1e-0637.14Show/hide
Query:  VLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVR-------DLNGFIPLHHAMINGRIDIMQ
        V I S     PLH +  H H + +  LL         VD+  +TPL LA E G V +VQ LL  N    ++        D NG  PLH A  NG IDI++
Subjt:  VLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVR-------DLNGFIPLHHAMINGRIDIMQ

Query:  RLIIA
         L+ A
Subjt:  RLIIA

Q9ZU96 Ankyrin repeat-containing protein At2g016806.7e-0731.25Show/hide
Query:  ISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIA
        I  ++  SPL+A+ +  HLE    +L++ P  A  V    +T LH A   G + IV+AL+EK+ +   V+D  G   LH A+    +++++ ++ A
Subjt:  ISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIA

Arabidopsis top hitse value%identityAlignment
AT2G01680.1 Ankyrin repeat family protein4.8e-0831.25Show/hide
Query:  ISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIA
        I  ++  SPL+A+ +  HLE    +L++ P  A  V    +T LH A   G + IV+AL+EK+ +   V+D  G   LH A+    +++++ ++ A
Subjt:  ISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIA

AT2G31820.1 Ankyrin repeat family protein2.1e-0830.3Show/hide
Query:  IQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLI
        ++   I++ N   P H +    HLE  + LL   P LA   D    T LH A+  G +++V  LLE +++   +   NG   LH A   G +++++ LI
Subjt:  IQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLI

AT4G10720.1 Ankyrin repeat family protein1.5e-0931.18Show/hide
Query:  VESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIARP
        + +PLH +    +L F   L+NL P  A +++    +PLHLA E G   +V +LL+ ++    +R   G  P H  +  G  D+M   ++A P
Subjt:  VESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIARP

AT4G10720.2 Ankyrin repeat family protein1.5e-0931.18Show/hide
Query:  VESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIARP
        + +PLH +    +L F   L+NL P  A +++    +PLHLA E G   +V +LL+ ++    +R   G  P H  +  G  D+M   ++A P
Subjt:  VESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIARP

AT5G54610.1 ankyrin5.6e-0930.56Show/hide
Query:  PNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQR
        P+I+Q+V +    + +PLH +     L+    L+ L P  A ++++   +PLHLA EN  VE+   L++ + S   +R   G  PLH     G +D++  
Subjt:  PNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQR

Query:  LIIARPRS
         ++A P S
Subjt:  LIIARPRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGCTCTAGGCGACCCAAATATCATTCAAAGAGTTCTAATCTCTTCATCCAACGTTGAGAGTCCATTGCATGCCTCAGTTTTGCATCACCACCTTGAATTCACTCG
ATTTCTTTTGAATCTTGTGCCTGAACTTGCAGGGGAAGTTGATGACCTGCAAAGGACACCTCTCCACTTAGCTTCTGAAAATGGAACGGTCGAGATTGTTCAAGCTTTGC
TGGAGAAGAACACAAGCACTTGCATGGTTCGTGATTTGAATGGGTTTATTCCTCTCCACCATGCAATGATTAATGGACGAATTGATATCATGCAACGGTTGATCATTGCG
AGGCCAAGATCTCCTTGGGTTAAGCTTCACAATGGTCAAAGT
mRNA sequenceShow/hide mRNA sequence
ATGCTAGCTCTAGGCGACCCAAATATCATTCAAAGAGTTCTAATCTCTTCATCCAACGTTGAGAGTCCATTGCATGCCTCAGTTTTGCATCACCACCTTGAATTCACTCG
ATTTCTTTTGAATCTTGTGCCTGAACTTGCAGGGGAAGTTGATGACCTGCAAAGGACACCTCTCCACTTAGCTTCTGAAAATGGAACGGTCGAGATTGTTCAAGCTTTGC
TGGAGAAGAACACAAGCACTTGCATGGTTCGTGATTTGAATGGGTTTATTCCTCTCCACCATGCAATGATTAATGGACGAATTGATATCATGCAACGGTTGATCATTGCG
AGGCCAAGATCTCCTTGGGTTAAGCTTCACAATGGTCAAAGT
Protein sequenceShow/hide protein sequence
MLALGDPNIIQRVLISSSNVESPLHASVLHHHLEFTRFLLNLVPELAGEVDDLQRTPLHLASENGTVEIVQALLEKNTSTCMVRDLNGFIPLHHAMINGRIDIMQRLIIA
RPRSPWVKLHNGQS