| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN68148.1 hypothetical protein VITISV_035665 [Vitis vinifera] | 2.6e-118 | 79.32 | Show/hide |
Query: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
++K IFMSQRKY LDILQDTGLTG P+KFPMEQNLKL+ +GE L+DPS+YRRL+ RLIYLTVTRP I YSVR LSQFM+ PRKPHWEAALRVLRYIKG
Subjt: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
Query: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
+PGQ L LP ENNL L A+C+SDWGGCR SR S+SG+C+F G+S+ISWKSKKQTNVSRSSAEAEYRAM NTCLELTWLRYIL+DL V L + A L+CDNQ
Subjt: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
Query: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLG
AAL+IAANPVFHERTKHIEIDCHIVREKLQAG+I+PC VSTKMQLADVFTKAL R QF+FL KLG
Subjt: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLG
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| CAN68148.1 hypothetical protein VITISV_035665 [Vitis vinifera] | 1.2e-03 | 39.1 | Show/hide |
Query: VLRDVKFCEDDFSF-SSASQTSTLAPSTPVVPLLDPSYSNIHPPLSIP------SPPI---------PSSTTSSPPP----------PSSDSPTN-SNP-
V RDV F E+ F F SS+SQ+ +PS P+ L S+ + P+S+P +PP+ PSS T P P PSS SP++ S+P
Subjt: VLRDVKFCEDDFSF-SSASQTSTLAPSTPVVPLLDPSYSNIHPPLSIP------SPPI---------PSSTTSSPPP----------PSSDSPTN-SNP-
Query: ----IPPDTSA-------PLRRFTRTKQPPAWHKDFEMSSGANHLTSSSSPSIGTR
+P +TSA PLRR TR QPPAWH D+ MS+ NH ++ SS GTR
Subjt: ----IPPDTSA-------PLRRFTRTKQPPAWHKDFEMSSGANHLTSSSSPSIGTR
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| RVW69506.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.2e-01 | 34.32 | Show/hide |
Query: LLRYLRATSNTSLCYDNGKVVLRDVKFCEDDFSFSSASQTSTLAPSTPVVPLLDPSYSNIHPPLSIP------SPPI---------PSSTT---------
L YL+ ++ T++ NG + F EDD+ SS SQ +PS P+ L S+ + P+S+P +PP+ PSS T
Subjt: LLRYLRATSNTSLCYDNGKVVLRDVKFCEDDFSFSSASQTSTLAPSTPVVPLLDPSYSNIHPPLSIP------SPPI---------PSSTT---------
Query: -------SSPPPPSSDSPTNSNPIPPDTSA-------PLRRFTRTKQPPAWHKDFEMSSGANHLTSSSS
SSP P S SP + +P +TSA PLRR TR QPPAWH D+ MS+ NH ++ SS
Subjt: -------SSPPPPSSDSPTNSNPIPPDTSA-------PLRRFTRTKQPPAWHKDFEMSSGANHLTSSSS
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| RVW69506.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.4e-119 | 75.55 | Show/hide |
Query: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
++ IFMSQRKYA+DILQD+GL G+ P+KFPMEQNLKL+LT+G+KL+DP+KYRRL+ RLIYLTVTRP I YSVR LSQFMHEPRKPHW+AA+RVL+YIKG
Subjt: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
Query: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
TPGQ LLLP NNLRL+A+C+SDWGGCR +R S+SG+C+F GNSIISWKSKKQ NVSRSSAEAEYRAM NTCLELTWLRY+LQDL VPLS LYCDN+
Subjt: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
Query: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
AALHIAANPVFHERTKHIEIDCHIVR+K G+I P + T++QLAD+FTKAL R QF+ L++KLGV D+H PT
Subjt: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
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| RVW70215.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 9.8e-01 | 40.52 | Show/hide |
Query: SFSSASQTSTL----APSTPVV----PLLDPSYSN--IHPPLS-------IPSPPIPSSTTSSPPPPSSDSPTNSNPIPPDTSAPLRRFTRTKQPPAWHK
SF S Q +L STP + P+ P SN + PLS +PS P PSS +S P PS P+N++ P PLRR TR QPPAWH
Subjt: SFSSASQTSTL----APSTPVV----PLLDPSYSN--IHPPLS-------IPSPPIPSSTTSSPPPPSSDSPTNSNPIPPDTSAPLRRFTRTKQPPAWHK
Query: DFEMSSGANHLTSSSS
D+ MS+ NH ++ SS
Subjt: DFEMSSGANHLTSSSS
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| RVW70215.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 4.2e-121 | 78.47 | Show/hide |
Query: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
++K IFMSQRKYALDILQDTGLTG P+KFPMEQNLKL+ +GE L+DPS+YRRL+ RLIYLTVTRP I YSVR LSQFM+ PRKPHWEAALRVLRYIKG
Subjt: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
Query: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
+PGQ L LP ENNL L A+C+S+WGGCR SR S+S +C+F G+S+ISWKSKKQTNVSRSSAEAEYRAM NTCLELTWLRYIL+DL V L + A L+CDNQ
Subjt: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
Query: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
AAL+IAANPVFHERTKHIEIDCHIVREKLQAG+I+ C VSTKMQLADVFTKAL R QF+FL KLGV+D+HSPT
Subjt: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
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| RVW71032.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.6e-123 | 79.93 | Show/hide |
Query: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
++K IFMSQRKYALDILQDTGLTGA P+KFPMEQNLKL+ GE L+DPS+YRRL+ RLIYLTVTRP I YSVR LSQFM+ PRKPHWEAALRVLRYIKG
Subjt: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
Query: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
+PGQ L LP ENNL L A+C+SDWGGCR SR S+SG+C+F G+S+ISWKSKKQTNVSRSSAEAEYRAM NTCLELTWLRYIL+DL V L + A L+CDNQ
Subjt: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
Query: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
AAL+IAANPVFHERTKHIEIDCHIVREKLQAG+I+PC VSTKMQLADVFTKAL R QF+FL KLGV+D+HSPT
Subjt: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
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| RVW71032.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 3.7e+00 | 38.78 | Show/hide |
Query: STLAPSTPVVPLLDPSYSNIHPPLSIPSPPIPSSTTSSPPPPSSDSPTNSNPIPPDTSA-------PLRRFTRTKQPPAWHKDFEMSSGANHLTSSSS
S+ P + P+ P SN P + + S SSP P S SP + +P TSA PLRR TR QPPAWH D+ MS+ NH ++ SS
Subjt: STLAPSTPVVPLLDPSYSNIHPPLSIPSPPIPSSTTSSPPPPSSDSPTNSNPIPPDTSA-------PLRRFTRTKQPPAWHKDFEMSSGANHLTSSSS
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| RVW71032.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 2.7e-123 | 79.56 | Show/hide |
Query: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
++K IFMSQRKYALDILQDTGLTG P+KFPMEQNLKL+ +GE L+DPS+YRRL+ RLIYLTVTRP I YSVR LSQFM+ PRKPHWEAALRVLRYIKG
Subjt: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
Query: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
+PGQ L LP ENNL L A+C+SDWGGCR SR S+SG+C+F G+S+ISWKSKKQTNVSRSSAEAEYRAM NTCLELTWLRYIL+DL V L + A L+CDNQ
Subjt: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
Query: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
AAL+IAANPVFHERTKHIEIDCHIVREKLQAG+I+PC VSTKMQLADVFTKAL R QF+FL KLGV+D+HSPT
Subjt: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438GBE7 Retrovirus-related Pol polyprotein from transposon RE1 | 5.6e-02 | 34.32 | Show/hide |
Query: LLRYLRATSNTSLCYDNGKVVLRDVKFCEDDFSFSSASQTSTLAPSTPVVPLLDPSYSNIHPPLSIP------SPPI---------PSSTT---------
L YL+ ++ T++ NG + F EDD+ SS SQ +PS P+ L S+ + P+S+P +PP+ PSS T
Subjt: LLRYLRATSNTSLCYDNGKVVLRDVKFCEDDFSFSSASQTSTLAPSTPVVPLLDPSYSNIHPPLSIP------SPPI---------PSSTT---------
Query: -------SSPPPPSSDSPTNSNPIPPDTSA-------PLRRFTRTKQPPAWHKDFEMSSGANHLTSSSS
SSP P S SP + +P +TSA PLRR TR QPPAWH D+ MS+ NH ++ SS
Subjt: -------SSPPPPSSDSPTNSNPIPPDTSA-------PLRRFTRTKQPPAWHKDFEMSSGANHLTSSSS
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| A0A438GBE7 Retrovirus-related Pol polyprotein from transposon RE1 | 6.6e-120 | 75.55 | Show/hide |
Query: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
++ IFMSQRKYA+DILQD+GL G+ P+KFPMEQNLKL+LT+G+KL+DP+KYRRL+ RLIYLTVTRP I YSVR LSQFMHEPRKPHW+AA+RVL+YIKG
Subjt: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
Query: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
TPGQ LLLP NNLRL+A+C+SDWGGCR +R S+SG+C+F GNSIISWKSKKQ NVSRSSAEAEYRAM NTCLELTWLRY+LQDL VPLS LYCDN+
Subjt: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
Query: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
AALHIAANPVFHERTKHIEIDCHIVR+K G+I P + T++QLAD+FTKAL R QF+ L++KLGV D+H PT
Subjt: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
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| A0A438GDC6 Retrovirus-related Pol polyprotein from transposon RE1 | 4.7e-01 | 40.52 | Show/hide |
Query: SFSSASQTSTL----APSTPVV----PLLDPSYSN--IHPPLS-------IPSPPIPSSTTSSPPPPSSDSPTNSNPIPPDTSAPLRRFTRTKQPPAWHK
SF S Q +L STP + P+ P SN + PLS +PS P PSS +S P PS P+N++ P PLRR TR QPPAWH
Subjt: SFSSASQTSTL----APSTPVV----PLLDPSYSN--IHPPLS-------IPSPPIPSSTTSSPPPPSSDSPTNSNPIPPDTSAPLRRFTRTKQPPAWHK
Query: DFEMSSGANHLTSSSS
D+ MS+ NH ++ SS
Subjt: DFEMSSGANHLTSSSS
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| A0A438GDC6 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-121 | 78.47 | Show/hide |
Query: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
++K IFMSQRKYALDILQDTGLTG P+KFPMEQNLKL+ +GE L+DPS+YRRL+ RLIYLTVTRP I YSVR LSQFM+ PRKPHWEAALRVLRYIKG
Subjt: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
Query: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
+PGQ L LP ENNL L A+C+S+WGGCR SR S+S +C+F G+S+ISWKSKKQTNVSRSSAEAEYRAM NTCLELTWLRYIL+DL V L + A L+CDNQ
Subjt: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
Query: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
AAL+IAANPVFHERTKHIEIDCHIVREKLQAG+I+ C VSTKMQLADVFTKAL R QF+FL KLGV+D+HSPT
Subjt: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
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| A0A438GFQ0 Retrovirus-related Pol polyprotein from transposon RE1 | 7.5e-124 | 79.93 | Show/hide |
Query: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
++K IFMSQRKYALDILQDTGLTGA P+KFPMEQNLKL+ GE L+DPS+YRRL+ RLIYLTVTRP I YSVR LSQFM+ PRKPHWEAALRVLRYIKG
Subjt: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
Query: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
+PGQ L LP ENNL L A+C+SDWGGCR SR S+SG+C+F G+S+ISWKSKKQTNVSRSSAEAEYRAM NTCLELTWLRYIL+DL V L + A L+CDNQ
Subjt: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
Query: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
AAL+IAANPVFHERTKHIEIDCHIVREKLQAG+I+PC VSTKMQLADVFTKAL R QF+FL KLGV+D+HSPT
Subjt: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
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| A0A438GFQ0 Retrovirus-related Pol polyprotein from transposon RE1 | 1.8e+00 | 38.78 | Show/hide |
Query: STLAPSTPVVPLLDPSYSNIHPPLSIPSPPIPSSTTSSPPPPSSDSPTNSNPIPPDTSA-------PLRRFTRTKQPPAWHKDFEMSSGANHLTSSSS
S+ P + P+ P SN P + + S SSP P S SP + +P TSA PLRR TR QPPAWH D+ MS+ NH ++ SS
Subjt: STLAPSTPVVPLLDPSYSNIHPPLSIPSPPIPSSTTSSPPPPSSDSPTNSNPIPPDTSA-------PLRRFTRTKQPPAWHKDFEMSSGANHLTSSSS
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| A0A438GFQ0 Retrovirus-related Pol polyprotein from transposon RE1 | 1.3e-123 | 79.56 | Show/hide |
Query: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
++K IFMSQRKYALDILQDTGLTG P+KFPMEQNLKL+ +GE L+DPS+YRRL+ RLIYLTVTRP I YSVR LSQFM+ PRKPHWEAALRVLRYIKG
Subjt: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
Query: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
+PGQ L LP ENNL L A+C+SDWGGCR SR S+SG+C+F G+S+ISWKSKKQTNVSRSSAEAEYRAM NTCLELTWLRYIL+DL V L + A L+CDNQ
Subjt: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
Query: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
AAL+IAANPVFHERTKHIEIDCHIVREKLQAG+I+PC VSTKMQLADVFTKAL R QF+FL KLGV+D+HSPT
Subjt: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDIHSPT
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| A5BNR5 Integrase catalytic domain-containing protein | 1.2e-118 | 79.32 | Show/hide |
Query: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
++K IFMSQRKY LDILQDTGLTG P+KFPMEQNLKL+ +GE L+DPS+YRRL+ RLIYLTVTRP I YSVR LSQFM+ PRKPHWEAALRVLRYIKG
Subjt: TRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKG
Query: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
+PGQ L LP ENNL L A+C+SDWGGCR SR S+SG+C+F G+S+ISWKSKKQTNVSRSSAEAEYRAM NTCLELTWLRYIL+DL V L + A L+CDNQ
Subjt: TPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQ
Query: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLG
AAL+IAANPVFHERTKHIEIDCHIVREKLQAG+I+PC VSTKMQLADVFTKAL R QF+FL KLG
Subjt: AALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLG
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| A5BNR5 Integrase catalytic domain-containing protein | 6.0e-04 | 39.1 | Show/hide |
Query: VLRDVKFCEDDFSF-SSASQTSTLAPSTPVVPLLDPSYSNIHPPLSIP------SPPI---------PSSTTSSPPP----------PSSDSPTN-SNP-
V RDV F E+ F F SS+SQ+ +PS P+ L S+ + P+S+P +PP+ PSS T P P PSS SP++ S+P
Subjt: VLRDVKFCEDDFSF-SSASQTSTLAPSTPVVPLLDPSYSNIHPPLSIP------SPPI---------PSSTTSSPPP----------PSSDSPTN-SNP-
Query: ----IPPDTSA-------PLRRFTRTKQPPAWHKDFEMSSGANHLTSSSSPSIGTR
+P +TSA PLRR TR QPPAWH D+ MS+ NH ++ SS GTR
Subjt: ----IPPDTSA-------PLRRFTRTKQPPAWHKDFEMSSGANHLTSSSSPSIGTR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.6e-38 | 36.26 | Show/hide |
Query: EIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLS-LTEGEKLNDPSKYRRLINRLIYLTV-TRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGT
+I++SQ Y IL + + P+ + L E N P R LI L+Y+ + TRP + +V +LS++ + W+ RVLRY+KGT
Subjt: EIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLS-LTEGEKLNDPSKYRRLINRLIYLTV-TRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGT
Query: PGQELL----LPFENNLRLQAYCNSDWGGCRTSRWSISG--FCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALL
+L+ L FEN ++ Y +SDW G R S +G F +F N +I W +K+Q +V+ SS EAEY A+ E WL+++L +N+ L +
Subjt: PGQELL----LPFENNLRLQAYCNSDWGGCRTSRWSISG--FCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALL
Query: YCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVI
Y DNQ + IA NP H+R KHI+I H RE++Q +I + T+ QLAD+FTK L +F L+DKLG++
Subjt: YCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.5e-39 | 26.1 | Show/hide |
Query: MKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAK-----------------PRIVEEREHMASVPYASAVGSLMYAMVCNRPDITHVVG
MKDLG A+QILGM+I R+R++ L LSQE+YIE+VL +F M NAK P VEE+ +MA VPY+SAVGSLMYAMVC RPDI H VG
Subjt: MKDLGAAKQILGMRISRDRSAGTLNLSQEQYIEKVLSKFKMNNAK-----------------PRIVEEREHMASVPYASAVGSLMYAMVCNRPDITHVVG
Query: VVSKYMANLGKEHWEAVKWLLRYLRATSNTSLCYDNGKVVLRDVKFCEDDFSFSSASQTSTLAPSTPVVPLLDPSYSNIHPPLSIPSPPIPSSTTSSPPP
VVS+++ N GKEHWEAVKW+LRYLR T+ LC+
Subjt: VVSKYMANLGKEHWEAVKWLLRYLRATSNTSLCYDNGKVVLRDVKFCEDDFSFSSASQTSTLAPSTPVVPLLDPSYSNIHPPLSIPSPPIPSSTTSSPPP
Query: PSSDSPTNSNPIPPDTSAPLRRFTRTKQPPAWHKDFEMSSGANHLTSSSSPSIGTRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKL
S+PI
Subjt: PSSDSPTNSNPIPPDTSAPLRRFTRTKQPPAWHKDFEMSSGANHLTSSSSPSIGTRKEIFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKL
Query: NDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSII
L+ Y ++D G +R S +G+ I
Subjt: NDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSII
Query: SWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLA
SW+SK Q V+ S+ EAEY A T E+ WL+ LQ+L + E ++YCD+Q+A+ ++ N ++H RTKHI++ H +RE + +K +ST A
Subjt: SWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQAALHIAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLA
Query: DVFTKALVRHQFDFLKDKLGV
D+ TK + R++F+ K+ +G+
Subjt: DVFTKALVRHQFDFLKDKLGV
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 1.8e-37 | 45.66 | Show/hide |
Query: IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQ
+F+SQ KYA IL + G+ P P+ L S++ K DPS +R ++ L YLT+TRP I+Y+V ++ Q MHEP ++ RVLRY+KGT
Subjt: IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQ
Query: ELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTW
L + + L +QA+C+SDW GC ++R S +GFC F G +IISW +K+Q VSRSS E EYRA+ T ELTW
Subjt: ELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.6e-62 | 45.25 | Show/hide |
Query: IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQ
+ +SQR+Y LD+L T + A P PM + KLSL G KL DP++YR ++ L YL TRP I+Y+V LSQFMH P + H +A R+LRY+ GTP
Subjt: IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQ
Query: ELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQAALH
+ L N L L AY ++DW G + S +G+ ++ G+ ISW SKKQ V RSS EAEYR++ NT E+ W+ +L +L + L+ ++YCDN A +
Subjt: ELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQAALH
Query: IAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGV
+ ANPVFH R KHI ID H +R ++Q+G ++ VST QLAD TK L R F K+GV
Subjt: IAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.2e-62 | 45.11 | Show/hide |
Query: IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQ
+ +SQR+Y LD+L T + A P PM + KL+L G KL DP++YR ++ L YL TRP ++Y+V LSQ+MH P HW A RVLRY+ GTP
Subjt: IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQ
Query: ELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQAALH
+ L N L L AY ++DW G S +G+ ++ G+ ISW SKKQ V RSS EAEYR++ NT EL W+ +L +L + LS ++YCDN A +
Subjt: ELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQAALH
Query: IAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDI
+ ANPVFH R KHI +D H +R ++Q+G ++ VST QLAD TK L R F K+GVI +
Subjt: IAANPVFHERTKHIEIDCHIVREKLQAGIIKPCDVSTKMQLADVFTKALVRHQFDFLKDKLGVIDI
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 2.6e-60 | 50 | Show/hide |
Query: IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQ
I + QRKYALD+L +TGL G P PM+ ++ S G D YRRLI RL+YL +TR I+++V LSQF PR H +A +++L YIKGT GQ
Subjt: IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQ
Query: ELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQAALH
L + ++LQ + ++ + C+ +R S +G+C+F G S+ISWKSKKQ VS+SSAEAEYRA+ E+ WL ++L +PLS+ LL+CDN AA+H
Subjt: ELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTWLRYILQDLNVPLSELALLYCDNQAALH
Query: IAANPVFHERTKHIEIDCHIVREK
IA N VFHERTKHIE DCH VRE+
Subjt: IAANPVFHERTKHIEIDCHIVREK
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 2.2e-14 | 43.04 | Show/hide |
Query: IYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFC
+YLT+TRP + ++V LSQF R +A +VL Y+KGT GQ L ++L+L+A+ +SDW C +R S++GFC
Subjt: IYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFC
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.3e-38 | 45.66 | Show/hide |
Query: IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQ
+F+SQ KYA IL + G+ P P+ L S++ K DPS +R ++ L YLT+TRP I+Y+V ++ Q MHEP ++ RVLRY+KGT
Subjt: IFMSQRKYALDILQDTGLTGAHPDKFPMEQNLKLSLTEGEKLNDPSKYRRLINRLIYLTVTRPAIAYSVRMLSQFMHEPRKPHWEAALRVLRYIKGTPGQ
Query: ELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTW
L + + L +QA+C+SDW GC ++R S +GFC F G +IISW +K+Q VSRSS E EYRA+ T ELTW
Subjt: ELLLPFENNLRLQAYCNSDWGGCRTSRWSISGFCIFPGNSIISWKSKKQTNVSRSSAEAEYRAMGNTCLELTW
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