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CmoCh09G013370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh09G013370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMitochondrial import inner membrane translocase subunit tim16
Genome locationCmo_Chr09:12117268..12120264
RNA-Seq ExpressionCmoCh09G013370
SyntenyCmoCh09G013370
Gene Ontology termsGO:0030150 - protein import into mitochondrial matrix (biological process)
GO:0005744 - TIM23 mitochondrial import inner membrane translocase complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005341 - Mitochondrial import inner membrane translocase subunit Tim16
IPR036869 - Chaperone J-domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011201.1 Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-5298.28Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVT ETPWEEIVKKYDALFE+NAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

XP_022925423.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata]4.3e-53100Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

XP_022963881.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata]3.0e-5196.55Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILG+T ETPWEEIVKKYDALFE+NAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

XP_022973994.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita maxima]3.6e-5298.28Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGV+PETPWEEIVKKYDALFEKN QTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

XP_023535168.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita pepo subsp. pepo]2.8e-5298.28Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGV+PETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKG+DAPS
Subjt:  ERLETLYQSKGQDAPS

TrEMBL top hitse value%identityAlignment
A0A5D3E4Y7 Mitochondrial import inner membrane translocase subunit tim169.6e-5194.83Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQILGVT ETPWEE+VKKYDALFE+NAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQ+KGQDAPS
Subjt:  ERLETLYQSKGQDAPS

A0A6J1EF52 mitochondrial import inner membrane translocase subunit PAM16 like 2-like2.1e-53100Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

A0A6J1HHA5 mitochondrial import inner membrane translocase subunit PAM16 like 2-like1.5e-5196.55Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILG+T ETPWEEIVKKYDALFE+NAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

A0A6J1HVD2 mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X31.2e-5096.55Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILGVT ETPWEEIVKKYDALFE+NAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDA S
Subjt:  ERLETLYQSKGQDAPS

A0A6J1IG86 mitochondrial import inner membrane translocase subunit PAM16 like 2-like1.7e-5298.28Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGV+PETPWEEIVKKYDALFEKN QTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

SwissProt top hitse value%identityAlignment
Q6PBL0 Mitochondrial import inner membrane translocase subunit tim166.5e-1248.11Show/hide
Query:  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKN--AQTGSFYLQSKVHR
        AK LA +IVMG+ ++ RAF +A RQ  A + A+     Q   Q+    +   MT QEA+QIL ++  TP EEI K Y+ LF+ N  A  GSFY+QSKV R
Subjt:  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKN--AQTGSFYLQSKVHR

Query:  AKERLE
        AKERL+
Subjt:  AKERLE

Q93VV9 Mitochondrial import inner membrane translocase subunit PAM16 like 21.1e-3872.41Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE +QN VR+A K +TEQEARQILGVT +T WEEI++KYD LFE NA+ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        E LE +Y+S+G   PS
Subjt:  ERLETLYQSKGQDAPS

Q93W66 Mitochondrial import inner membrane translocase subunit PAM16 like 13.6e-3169.44Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q T++R   +  E EARQILGVT ++ W+EI+KKYD LFE+NAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQ
        E LET YQ
Subjt:  ERLETLYQ

Q9C1W5 Mitochondrial import inner membrane translocase subunit tim161.2e-1039.66Show/hide
Query:  KILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNT---VRRASKVMTEQEARQILGVTPETPWE-EIVKKYDALFEKN--AQTGSFYLQSKVH
        + +   I++GS ++++AFVQAY+Q + NA++    Q     +   VRR    MT QEA  IL + PE+  E E+ K++  +FE N   + GSFYLQSKV 
Subjt:  KILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNT---VRRASKVMTEQEARQILGVTPETPWE-EIVKKYDALFEKN--AQTGSFYLQSKVH

Query:  RAKERLETLYQSKGQD
        RA E+L++    K Q+
Subjt:  RAKERLETLYQSKGQD

Q9CQV1 Mitochondrial import inner membrane translocase subunit TIM163.5e-1041.74Show/hide
Query:  AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKV--MTEQEARQILGVTPETPWEEIVKKYDALFEKNAQT--GSFYLQSKVHR
        AK LA +IVMG  ++ RAF +A RQ    +  +  A+    +    AS +  ++ QEA+QIL V+  +P EE+ K Y+ LF+ N ++  GSFYLQSKV R
Subjt:  AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKV--MTEQEARQILGVTPETPWEEIVKKYDALFEKNAQT--GSFYLQSKVHR

Query:  AKERLETLYQSKGQD
        AKERL+   + + Q+
Subjt:  AKERLETLYQSKGQD

Arabidopsis top hitse value%identityAlignment
AT3G59280.1 Protein Transporter, Pam167.5e-4072.41Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE +QN VR+A K +TEQEARQILGVT +T WEEI++KYD LFE NA+ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        E LE +Y+S+G   PS
Subjt:  ERLETLYQSKGQDAPS

AT5G61880.1 Protein Transporter, Pam162.6e-3269.44Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q T++R   +  E EARQILGVT ++ W+EI+KKYD LFE+NAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQ
        E LET YQ
Subjt:  ERLETLYQ

AT5G61880.2 Protein Transporter, Pam162.6e-3269.44Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q T++R   +  E EARQILGVT ++ W+EI+KKYD LFE+NAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAK

Query:  ERLETLYQ
        E LET YQ
Subjt:  ERLETLYQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTACGAATGCTTCGAAGTCCGGTGT
TGCTCAAGAAACAATTCAAAACACCGTTCGCAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCCCAGAAACGCCTTGGGAGGAAATTG
TGAAGAAATATGACGCTTTGTTCGAAAAGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTGTATCAGAGCAAA
GGTCAGGATGCCCCTAGCTGA
mRNA sequenceShow/hide mRNA sequence
CAAGCAGAGGGCGCCCTTCCCTTTCTTCTTCCTTTCTCTTTGCCGTCTCCAATTTCTCTTTGCCGCCGCCGCCCCTCCCTCTCTTCACTCTCTATTGTTCAACGATTTGC
CGCATCGGCGCCACCCTATCCTTATCAACCTCCTCCCCTCACACCCGGACGCTAGTAGGGTGAACGTTGGGTCGGTTTCCAGTTTTGGCAACCTCCATATCACAAGGCAA
TTCTAGCGGCGTTAACGATTTCGGACCCGTTATCGAGGCCAGCCAATTAATCATGGCTGCAAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGG
CCTTTGTTCAAGCCTACCGTCAAGCCCTTACGAATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACACCGTTCGCAGAGCAAGCAAAGTGATGACAGAGCAA
GAAGCCAGGCAGATTCTTGGCGTCACCCCAGAAACGCCTTGGGAGGAAATTGTGAAGAAATATGACGCTTTGTTCGAAAAGAATGCTCAGACTGGAAGCTTTTATCTTCA
GTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTGTATCAGAGCAAAGGTCAGGATGCCCCTAGCTGAGGAATGTGTTGTGTTTTGCCCATTTAGTGTTCTTGTA
TAATTCTTAATTTTGTGATGGCCGGCAGCATGGCATGATTGATGATGAAATTGATGTATAATCTTTTCTTCCTCTTGTGGGAAAAAGTGACGTTTAAAATAGTATTTTAG
ATGAGGATGCCTTGAGAGCACCTAAATTTAATTTGTTTACTTCTAATAATTTGTAAACAATTATTTGTTACGCACAGGCCTGAAGTAGACCACGATCATTGTCCGATGAA
ATATTGCTAATACGAGGCTCGAGTTAGAACCCTAGACTTAGAACGATTAATTCAAAAGCC
Protein sequenceShow/hide protein sequence
MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSK
GQDAPS