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CmoCh10G000480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G000480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationCmo_Chr10:228881..229373
RNA-Seq ExpressionCmoCh10G000480
SyntenyCmoCh10G000480
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5058542.1 hypothetical protein JHK86_013538 [Glycine max]1.4e-2783.13Show/hide
Query:  CPASKRKLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
        CP    KL  ++  MADWGPV+IAVVLFVLLSPGLLFQ+PARGRV EFGNMQTSGASILVHAIIYFGLITIFL+AIGVHIYTG
Subjt:  CPASKRKLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG

XP_003525413.1 uncharacterized protein LOC100805083 [Glycine max]1.4e-2783.13Show/hide
Query:  CPASKRKLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
        CP    KL  ++  MADWGPV+IAVVLFVLLSPGLLFQ+PARGRV EFGNMQTSGASILVHAIIYFGLITIFL+AIGVHIYTG
Subjt:  CPASKRKLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG

XP_022921425.1 uncharacterized protein LOC111429708 [Cucurbita moschata]2.9e-33100Show/hide
Query:  KLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
        KLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
Subjt:  KLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG

XP_022987136.1 uncharacterized protein LOC111484778 [Cucurbita maxima]1.1e-27100Show/hide
Query:  MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
        MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
Subjt:  MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG

XP_023515465.1 uncharacterized protein LOC111779615 [Cucurbita pepo subsp. pepo]1.4e-2798.55Show/hide
Query:  MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
        MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVH+YTG
Subjt:  MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG

TrEMBL top hitse value%identityAlignment
A0A0B2QV82 Uncharacterized protein6.7e-2883.13Show/hide
Query:  CPASKRKLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
        CP    KL  ++  MADWGPV+IAVVLFVLLSPGLLFQ+PARGRV EFGNMQTSGASILVHAIIYFGLITIFL+AIGVHIYTG
Subjt:  CPASKRKLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG

A0A5A7URK5 Putative transmembrane protein1.5e-2797.1Show/hide
Query:  MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
        MADWGPVIIAVVLFVLLSPGLLFQIPA+GRVVEFGNMQTSGASILVHAIIYFGLITIFL+AIGVHIYTG
Subjt:  MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG

A0A6J1E5M1 uncharacterized protein LOC1114297081.4e-33100Show/hide
Query:  KLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
        KLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
Subjt:  KLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG

A0A6J1JDA3 uncharacterized protein LOC1114847785.1e-28100Show/hide
Query:  MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
        MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
Subjt:  MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG

I1K6N1 Uncharacterized protein6.7e-2883.13Show/hide
Query:  CPASKRKLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
        CP    KL  ++  MADWGPV+IAVVLFVLLSPGLLFQ+PARGRV EFGNMQTSGASILVHAIIYFGLITIFL+AIGVHIYTG
Subjt:  CPASKRKLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01940.1 Protein of unknown function (DUF 3339)1.3e-2071.21Show/hide
Query:  ADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIY
        ADWGPV +AVVLFV+LSPGLLFQ+PAR RV+E GNM TSG SILVHAI++F +ITI ++AI +HI+
Subjt:  ADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIY

AT3G27027.1 Protein of unknown function (DUF 3339)7.8e-2172.31Show/hide
Query:  DWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIY
        DWGPVI+AV LF+LLSPGLLFQ+PAR RVVEFGNM TSG +ILVHA IYF ++TI ++AI +HI+
Subjt:  DWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIY

AT3G48660.1 Protein of unknown function (DUF 3339)3.9e-2885.51Show/hide
Query:  MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
        MADWGPV++AV+LFVLL+PGLLFQIPARGRVVEFGNMQTSGASILVH II+FGLITIF +AI +HIYTG
Subjt:  MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG

AT5G40980.1 Protein of unknown function (DUF 3339)3.2e-2274.24Show/hide
Query:  ADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIY
        ADWGPVI+AV LF+LLSPGLLFQ+PAR RV+EFGNM TSG SILVHAIIYF ++TI ++AI +HI+
Subjt:  ADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIY

AT5G63500.1 Protein of unknown function (DUF 3339)6.6e-2886.96Show/hide
Query:  MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG
        MADWGPV+IAV+LFV+LSPGLLFQIPA GRVVEFGNMQTSGASILVHAII+FGLITIF +AI VHIY+G
Subjt:  MADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTGTCGAATCACTGTCCCGCTTCCAAGCGTAAACTTGAACACACATCCCATCCAATGGCAGATTGGGGGCCGGTGATTATAGCGGTGGTGCTGTTCGTGCTCCT
CAGTCCGGGGCTGCTGTTTCAGATCCCAGCCAGAGGAAGGGTGGTTGAGTTTGGGAACATGCAGACAAGCGGGGCTTCCATTTTAGTCCACGCCATCATCTACTTCGGCC
TCATCACCATCTTCCTCGTCGCCATCGGCGTCCACATCTACACTGGCTAA
mRNA sequenceShow/hide mRNA sequence
GTCTGTGCTGGAAAGTTGAATGTAACTGTAAGCCGCGTTAGTTCAATAAAGTTTTCATCTCACGATGCCTGAAAAATTAAATTAAGGAAAACCCAAAAATGGCACCGCCT
CATCCGTCCACGTGAAGCATCAAGATCGATGCAGTTGTCGAATCACTGTCCCGCTTCCAAGCGTAAACTTGAACACACATCCCATCCAATGGCAGATTGGGGGCCGGTGA
TTATAGCGGTGGTGCTGTTCGTGCTCCTCAGTCCGGGGCTGCTGTTTCAGATCCCAGCCAGAGGAAGGGTGGTTGAGTTTGGGAACATGCAGACAAGCGGGGCTTCCATT
TTAGTCCACGCCATCATCTACTTCGGCCTCATCACCATCTTCCTCGTCGCCATCGGCGTCCACATCTACACTGGCTAA
Protein sequenceShow/hide protein sequence
MQLSNHCPASKRKLEHTSHPMADWGPVIIAVVLFVLLSPGLLFQIPARGRVVEFGNMQTSGASILVHAIIYFGLITIFLVAIGVHIYTG