CuGenDBv2

Gene ID	CmoCh10G001110
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Golgin subfamily A member 6-like protein 2
Genome location	Cmo_Chr10:476956..478605
RNA-Seq Expression	CmoCh10G001110
Synteny	CmoCh10G001110
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004138095.1 uncharacterized protein LOC101204691 [Cucumis sativus]

2.5e-94

83.49

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Query:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
        MG CSSK+GSEI  DDV+GLKEK+RLLREEVRGV+ EMDK TKAHEKD +VFAFKEA WK+EKKRLKEEVKMLRK+V E  TEIEE NFG+K ATE +ME
Subjt:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME

Query:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
        GTPN IF QIQQERA RDEAIEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERT+AL+T+LQAKEETIKALKE++VSMEQ+KYKRNR+IDILRQSLRI
Subjt:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI

Query:  MTSKKEQQLGTFHKCVCK
        MTSKKEQQ+ TFHKCVCK
Subjt:  MTSKKEQQLGTFHKCVCK

XP_022922098.1 uncharacterized protein LOC111430150 [Cucurbita moschata]

5.6e-115

100

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Query:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
        MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
Subjt:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME

Query:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
        GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
Subjt:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI

Query:  MTSKKEQQLGTFHKCVCK
        MTSKKEQQLGTFHKCVCK
Subjt:  MTSKKEQQLGTFHKCVCK

XP_022988640.1 uncharacterized protein LOC111485829 [Cucurbita maxima]

8.1e-114

99.08

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Query:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
        MGACSSK+GSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEA WKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
Subjt:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME

Query:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
        GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
Subjt:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI

Query:  MTSKKEQQLGTFHKCVCK
        MTSKKEQQLGTFHKCVCK
Subjt:  MTSKKEQQLGTFHKCVCK

XP_023515394.1 uncharacterized protein LOC111779565 [Cucurbita pepo subsp. pepo]

5.3e-113

98.17

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Query:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
        MGACSSK+GSEICDDDVRGLKEKVRLLREEVRGV+SEMDKVTKAHEKDKMVFAFKEA WK+EKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
Subjt:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME

Query:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
        GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
Subjt:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI

Query:  MTSKKEQQLGTFHKCVCK
        MTSKKEQQLGTFHKCVCK
Subjt:  MTSKKEQQLGTFHKCVCK

XP_038879675.1 uncharacterized protein LOC120071454 [Benincasa hispida]

1.1e-94

83.94

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Query:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
        MG CSSK+GSEI +D+V+GLKEK+RLLREEVRGVMS MDK TKAHEKD +VFAFKEA WK+EKKRLKEEVKMLRK+V E ITEIEE NFG+K ATE +ME
Subjt:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME

Query:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
        GTPN IF QIQQERA RDEAIEKWKQLYHAIKIELDDLIQRTHNGDGL+WGA+ERT+AL+TEL+AKEETIKALKE +VSMEQEKYKRNR+IDILRQSLRI
Subjt:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI

Query:  MTSKKEQQLGTFHKCVCK
        MTSKKEQQ+  FHKCVCK
Subjt:  MTSKKEQQLGTFHKCVCK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LS07 Uncharacterized protein

1.2e-94

83.49

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Query:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
        MG CSSK+GSEI  DDV+GLKEK+RLLREEVRGV+ EMDK TKAHEKD +VFAFKEA WK+EKKRLKEEVKMLRK+V E  TEIEE NFG+K ATE +ME
Subjt:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME

Query:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
        GTPN IF QIQQERA RDEAIEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERT+AL+T+LQAKEETIKALKE++VSMEQ+KYKRNR+IDILRQSLRI
Subjt:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI

Query:  MTSKKEQQLGTFHKCVCK
        MTSKKEQQ+ TFHKCVCK
Subjt:  MTSKKEQQLGTFHKCVCK

A0A1S3CLU2 uncharacterized protein LOC103502383

1.0e-93

82.11

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Query:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
        MG CSSK+GSEI  DDV+GLKEK+RLLREEVRGV++EMDK TKAHEKD +VFAFKEA WK+EKKRL+EEVKMLRK+V E  TEIEE NFG+K ATE +ME
Subjt:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME

Query:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
        GTPN IF QIQQERA RDEA+EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERT+AL+T+LQAKEETIK+LKE++VSMEQ+KYKRNR+IDILRQSLRI
Subjt:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI

Query:  MTSKKEQQLGTFHKCVCK
        MTSKKEQQ+ T HKCVCK
Subjt:  MTSKKEQQLGTFHKCVCK

A0A5D3BGY2 Golgin subfamily A member 6-like protein 2

1.0e-93

82.11

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Query:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
        MG CSSK+GSEI  DDV+GLKEK+RLLREEVRGV++EMDK TKAHEKD +VFAFKEA WK+EKKRL+EEVKMLRK+V E  TEIEE NFG+K ATE +ME
Subjt:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME

Query:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
        GTPN IF QIQQERA RDEA+EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERT+AL+T+LQAKEETIK+LKE++VSMEQ+KYKRNR+IDILRQSLRI
Subjt:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI

Query:  MTSKKEQQLGTFHKCVCK
        MTSKKEQQ+ T HKCVCK
Subjt:  MTSKKEQQLGTFHKCVCK

A0A6J1E5M3 uncharacterized protein LOC111430150

2.7e-115

100

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Query:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
        MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
Subjt:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME

Query:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
        GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
Subjt:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI

Query:  MTSKKEQQLGTFHKCVCK
        MTSKKEQQLGTFHKCVCK
Subjt:  MTSKKEQQLGTFHKCVCK

A0A6J1JK50 uncharacterized protein LOC111485829

3.9e-114

99.08

Show/hide

Query:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
        MGACSSK+GSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEA WKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME
Subjt:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKME

Query:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
        GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI
Subjt:  GTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRI

Query:  MTSKKEQQLGTFHKCVCK
        MTSKKEQQLGTFHKCVCK
Subjt:  MTSKKEQQLGTFHKCVCK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G23930.1 unknown protein

2.1e-27

39.21

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Query:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVF-AFKEA--DWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATER
        MG C+SK+       + RG++      +++ RG       + +  E++K++F   KEA  +W+ E+K+L+EEV+ LRK++ ER    EE     KT T  
Subjt:  MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVF-AFKEA--DWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATER

Query:  KMEGTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDG-------LYWGATERTDA-----LRTELQAKEETIKALKERLVSMEQEKY
        + E    ++  ++  ERA RDEA+EKWKQLY AIK ELD LI  T +  G       L     E T+A     LR E++ KEET++ L+E++V M+++KY
Subjt:  KMEGTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDG-------LYWGATERTDA-----LRTELQAKEETIKALKERLVSMEQEKY

Query:  KRNRDIDILRQSLRIMTSKKEQQLGTF
        ++ R+ID+LRQSLRI+ SKK+++ G+F
Subjt:  KRNRDIDILRQSLRIMTSKKEQQLGTF

AT4G13540.1 unknown protein

2.5e-20

36.18

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Query:  GSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFK--EADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNII
        G     D+    K ++++   E R      +   +  EK++++ A K  E +W+ E+KRL+EEVK LR+++ E+          +  A + + E     +
Subjt:  GSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFK--EADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNII

Query:  FGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATER----TDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRIM
          Q+  ERA R+EA+E+WKQLY AIK ELDDLI  T+ G+ L     E        LR E++A+ ETI+ LK R+  ME+++  + R+ID+LRQSLRI+
Subjt:  FGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATER----TDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRIM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTGCATGCTCAAGCAAAGAAGGGAGTGAGATCTGTGATGATGATGTTAGAGGATTGAAAGAAAAGGTAAGGTTACTTAGAGAGGAAGTGAGGGGTGTAATGTCTGA
GATGGATAAGGTGACTAAAGCTCATGAGAAAGACAAGATGGTTTTTGCATTTAAGGAGGCAGATTGGAAATCAGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGA
GGAAGAGGGTAAATGAGAGGATTACAGAGATTGAAGAGAGAAATTTTGGAGATAAGACTGCAACAGAGCGAAAGATGGAGGGAACTCCAAATATCATCTTTGGGCAGATA
CAACAAGAAAGAGCACACAGAGATGAAGCCATTGAGAAGTGGAAGCAGCTTTACCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGG
ATTATACTGGGGAGCAACTGAGAGGACAGACGCACTACGAACAGAATTACAAGCAAAGGAGGAGACAATAAAAGCCCTCAAAGAACGATTAGTTTCAATGGAGCAAGAAA
AATATAAGAGGAACAGAGATATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAGCTAGGTACTTTCCATAAATGCGTCTGTAAGTAA

mRNA sequence

Show/hide mRNA sequence

ATCAGATTCTGAATTCCGAATGGGGTCACAGGTCATATCTGTCTGTATTTCCTTGTATAAAATGACAGCCATTCACGCGCCTCATAGACGTTTCCACTAATCATTAACTC
TGAGAAAGAGCTAACCAAGTAGAGCAAGGGATAAGCACAGCCAATATAGGTACCCCAAATGCAGCTCTCTTATGGAGGAGCCTTTCATCTCTCTCCTTTATTTCCAGTCT
ATAAGGCCAACTTGAAGACTCGCTCAGTAACCCAGAAAGGCTAAAGAAGCAAAGCCTTCACTAAGATGGGTGCATGCTCAAGCAAAGAAGGGAGTGAGATCTGTGATGAT
GATGTTAGAGGATTGAAAGAAAAGGTAAGGTTACTTAGAGAGGAAGTGAGGGGTGTAATGTCTGAGATGGATAAGGTGACTAAAGCTCATGAGAAAGACAAGATGGTTTT
TGCATTTAAGGAGGCAGATTGGAAATCAGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGAGGAAGAGGGTAAATGAGAGGATTACAGAGATTGAAGAGAGAAATT
TTGGAGATAAGACTGCAACAGAGCGAAAGATGGAGGGAACTCCAAATATCATCTTTGGGCAGATACAACAAGAAAGAGCACACAGAGATGAAGCCATTGAGAAGTGGAAG
CAGCTTTACCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTATACTGGGGAGCAACTGAGAGGACAGACGCACTACGAACAGA
ATTACAAGCAAAGGAGGAGACAATAAAAGCCCTCAAAGAACGATTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGATATTGACATACTGAGGCAAAGCTTGA
GAATTATGACCAGTAAGAAGGAACAGCAGCTAGGTACTTTCCATAAATGCGTCTGTAAGTAACCTGCCCATGAATTGGGCAAGAAAACAAAATTTTCAACACCATATTAG
AATGATGAACAAATAATGAAATGCCGATTGAATGTGTTTTGTAAAGATTGTTACCTCTGCACCCCCACCCTTCATTTCAACCCAATGGTCATTCTCATCATCATTTTGTC
GGCATGGTCCAAAGGTAAACACATTTTTGTTCCTTAGACTGGGATTTTGGGAAGAGTTGCAAAAGATGAAAAGAAAATAAAAGATTAATCCTCTCTCAGTTGACAGGAAG
ATACCTGTGCTGATTCATAGATAAGGCTACAATTCAACTTTGATAGACAATCAC

Protein sequence

Show/hide protein sequence

MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQI
QQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK

CmoCh10G001110 (gene) of Cucurbita moschata (Rifu) v1 genome