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CmoCh10G001530 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G001530
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionsuccinate dehydrogenase subunit 7B, mitochondrial-like
Genome locationCmo_Chr10:703341..706682
RNA-Seq ExpressionCmoCh10G001530
SyntenyCmoCh10G001530
Gene Ontology termsGO:0005749 - mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (cellular component)
GO:0043495 - protein membrane anchor (molecular function)
InterPro domainsIPR034573 - Succinate dehydrogenase subunit 7, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589465.1 LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. sororia]4.1e-4598Show/hide
Query:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST
        MAFLLTKTSLASHFRSQSQVDPSSPSRRGFH+EPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASE T
Subjt:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST

KAG7023150.1 Succinate dehydrogenase subunit 7B, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-46100Show/hide
Query:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST
        MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST
Subjt:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST

XP_022921345.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita moschata]4.5e-52100Show/hide
Query:  MLFFFLAYCGTMAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREE
        MLFFFLAYCGTMAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREE
Subjt:  MLFFFLAYCGTMAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREE

Query:  ARQAKAASEST
        ARQAKAASEST
Subjt:  ARQAKAASEST

XP_022988423.1 succinate dehydrogenase subunit 7A, mitochondrial-like [Cucurbita maxima]5.9e-4495Show/hide
Query:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST
        MAFLLTKT+LASHFRSQSQVDPSSPSRRGFH+EPG REKALLAEDPSLRRFRSHKKGV+RIK+IGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST
Subjt:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST

XP_023515901.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita pepo subsp. pepo]3.5e-4496Show/hide
Query:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST
        MAFLLTKTSLASHFRSQ QVDPSSPSRRGFH+EPGTREKALLAEDPSLRRFRSHKKGV+RIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAA EST
Subjt:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST

TrEMBL top hitse value%identityAlignment
A0A6J1C1M2 succinate dehydrogenase subunit 7B, mitochondrial-like3.3e-4087Show/hide
Query:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST
        MAF L +T+LASHFRSQSQ DPSS SRRGFH+EPGTREKALLAEDPSLRRFRSHKKGV+RIK++GD+LTIVVVAGCCYEIYVKATMREEARQAK AS ST
Subjt:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST

A0A6J1E5D6 succinate dehydrogenase subunit 7B, mitochondrial-like2.2e-52100Show/hide
Query:  MLFFFLAYCGTMAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREE
        MLFFFLAYCGTMAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREE
Subjt:  MLFFFLAYCGTMAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREE

Query:  ARQAKAASEST
        ARQAKAASEST
Subjt:  ARQAKAASEST

A0A6J1F188 succinate dehydrogenase subunit 7B, mitochondrial-like1.5e-4091Show/hide
Query:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST
        MAFLL KT+LAS FRSQSQVDPSS SRRGFH+EPGTREKALLAEDPSLRRFRSHKKGV+RIKKIGDVLTIVVVAGCCYEIYVKATMREEARQA  AS ST
Subjt:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST

A0A6J1HVK4 succinate dehydrogenase subunit 7A, mitochondrial-like3.9e-4190Show/hide
Query:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST
        MAFLL KT+LASHFRSQSQ DPS+ SRRGFH+EPGTREKALLAEDPSLRRFRSHKKGV+RIKKIGDVLTIVVVAGCCYEIYV+ATMREEARQAK AS ST
Subjt:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST

A0A6J1JM91 succinate dehydrogenase subunit 7A, mitochondrial-like2.9e-4495Show/hide
Query:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST
        MAFLLTKT+LASHFRSQSQVDPSSPSRRGFH+EPG REKALLAEDPSLRRFRSHKKGV+RIK+IGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST
Subjt:  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST

SwissProt top hitse value%identityAlignment
Q3E870 Succinate dehydrogenase subunit 7B, mitochondrial7.3e-2967Show/hide
Query:  MAFLLTKTSLASHFRSQSQV---DPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAAS
        MAFLL   S++SH RS S     D  S SRRGFHIEPGTREKALLAED +L+RF+SHKK V ++K+IGDVLT+VVVAGCCYEIYVKA M++EA  A  +S
Subjt:  MAFLLTKTSLASHFRSQSQV---DPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAAS

Q6H611 Succinate dehydrogenase subunit 7, mitochondrial1.6e-1246.91Show/hide
Query:  TSLASHFRSQSQVDPS----SPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKA
        ++L S  RS     P+     P RRGFH+E G REKALL ED +L+RF+S+K  V ++ K+G++LT VV+  C YEI   A
Subjt:  TSLASHFRSQSQVDPS----SPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKA

Q9C5E8 Succinate dehydrogenase subunit 7A, mitochondrial5.8e-2668.42Show/hide
Query:  MAFLLTKTSLASHFRSQSQVDPS--SPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQA
        MAFLL  TS++SH RS SQ      + SRRGFH+E G REKALLAED SLRRF+SHKKGV R+K+IGDVLT+VVVAGCCYEIY +  MR+EA+ A
Subjt:  MAFLLTKTSLASHFRSQSQVDPS--SPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQA

Arabidopsis top hitse value%identityAlignment
AT3G47833.1 unknown protein4.1e-2768.42Show/hide
Query:  MAFLLTKTSLASHFRSQSQVDPS--SPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQA
        MAFLL  TS++SH RS SQ      + SRRGFH+E G REKALLAED SLRRF+SHKKGV R+K+IGDVLT+VVVAGCCYEIY +  MR+EA+ A
Subjt:  MAFLLTKTSLASHFRSQSQVDPS--SPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQA

AT5G62575.1 unknown protein4.0e-3067.68Show/hide
Query:  MAFLLTKTSLASHFRSQSQV--DPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAAS
        MAFLL   S++SH RS S    D  S SRRGFHIEPGTREKALLAED +L+RF+SHKK V ++K+IGDVLT+VVVAGCCYEIYVKA M++EA  A  +S
Subjt:  MAFLLTKTSLASHFRSQSQV--DPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAAS

AT5G62575.2 unknown protein5.2e-3067Show/hide
Query:  MAFLLTKTSLASHFRSQSQV---DPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAAS
        MAFLL   S++SH RS S     D  S SRRGFHIEPGTREKALLAED +L+RF+SHKK V ++K+IGDVLT+VVVAGCCYEIYVKA M++EA  A  +S
Subjt:  MAFLLTKTSLASHFRSQSQV---DPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTTTTTCTTTCTCGCATATTGTGGAACAATGGCGTTTTTGCTCACCAAAACCTCTCTTGCGTCTCACTTCCGATCTCAATCTCAGGTGGATCCTTCGTCACCCTC
GCGCCGTGGATTCCACATCGAACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCGCTCGAATCAAAA
AAATTGGAGATGTTCTGACAATCGTAGTTGTTGCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGGCAGGCAAAGGCAGCTAGCGAAAGT
ACATGA
mRNA sequenceShow/hide mRNA sequence
TTGACCTCACCGTATTTCTTATTAATCTCCCTGTCACCCAATGCTTTTTTTCTTTCTCGCATATTGTGGAACAATGGCGTTTTTGCTCACCAAAACCTCTCTTGCGTCTC
ACTTCCGATCTCAATCTCAGGTGGATCCTTCGTCACCCTCGCGCCGTGGATTCCACATCGAACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGG
CGGTTCAGATCACACAAGAAAGGTGTCGCTCGAATCAAAAAAATTGGAGATGTTCTGACAATCGTAGTTGTTGCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCAT
GCGAGAAGAAGCTCGGCAGGCAAAGGCAGCTAGCGAAAGTACATGATGGAATTTGTATCCAGTGACTAATAAAATGTCTCACAAAGGTTTTTAATGCTTTCAGCTAAATA
AAGGTTTTGAAGCACCAGTTCTATTTCCCCCATTTCTTGTAGGTTGGTTTTAATCATCAATAATTTCTTCATGATACTTCAATTGGCATGCAAAACCGAGAAGGAACTTC
CTTATTCACTCAAATTTCTGTGTGAAATAGATGCCAGGAACTTCCTTATTCACTCAAATTTCTGTGTGAAATAGATGCCAGGAACTTCCTTATTCACTCAAA
Protein sequenceShow/hide protein sequence
MLFFFLAYCGTMAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASES
T