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CmoCh10G002050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G002050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmini zinc finger protein 3-like
Genome locationCmo_Chr10:922114..922401
RNA-Seq ExpressionCmoCh10G002050
SyntenyCmoCh10G002050
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023191.1 Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-4798.95Show/hide
Query:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
        MKKRVVVVKKSDG GGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
Subjt:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH

XP_022135253.1 mini zinc finger protein 3-like [Momordica charantia]8.9e-4191.49Show/hide
Query:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR+VVVKKSDGSGGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL CAAC CHRNFHRREVD+EVVFEYSPPNS +
Subjt:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH

XP_022921765.1 mini zinc finger protein 3-like [Cucurbita moschata]2.2e-47100Show/hide
Query:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
        MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
Subjt:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH

XP_022987207.1 mini zinc finger protein 3-like [Cucurbita maxima]4.9e-4798.95Show/hide
Query:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
        MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRR+VDAEVVFEYSPPNSDHH
Subjt:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH

XP_023516615.1 mini zinc finger protein 3-like [Cucurbita pepo subsp. pepo]1.9e-4698.95Show/hide
Query:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
        MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSP NSDHH
Subjt:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH

TrEMBL top hitse value%identityAlignment
A0A0A0LSA6 ZF-HD dimerization-type domain-containing protein5.3e-3987.37Show/hide
Query:  MKKRVVVVKKSDGSGGRGNR--SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSD
        MKKR+VVV+KSDGS GR N   S SGS VRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRREVDAEVVFEYSPPNS+
Subjt:  MKKRVVVVKKSDGSGGRGNR--SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSD

A0A5A7UWS7 Mini zinc finger protein 3-like6.9e-3986.46Show/hide
Query:  MKKRVVVVKKSDGSGGRGNR---SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSD
        MKKR+VVVKKSDGS GR N    + SGS VRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL+CAACGCHRNFHRREVDAEVVFEYSPPNS+
Subjt:  MKKRVVVVKKSDGSGGRGNR---SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSD

A0A6J1C4B2 mini zinc finger protein 3-like4.3e-4191.49Show/hide
Query:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR+VVVKKSDGSGGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEAL CAAC CHRNFHRREVD+EVVFEYSPPNS +
Subjt:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH

A0A6J1E6Q9 mini zinc finger protein 3-like1.1e-47100Show/hide
Query:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
        MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
Subjt:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH

A0A6J1J9R5 mini zinc finger protein 3-like2.4e-4798.95Show/hide
Query:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH
        MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRR+VDAEVVFEYSPPNSDHH
Subjt:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH

SwissProt top hitse value%identityAlignment
B8BIU8 Mini zinc finger protein 12.4e-2064.79Show/hide
Query:  SDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDA
        S  +     R  +  VVRY ECQ+NHAA +GG AVDGCREFMA G EGT  AL CAACGCHR+FHRREV+A
Subjt:  SDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDA

Q2Q493 Mini zinc finger protein 33.4e-2764.89Show/hide
Query:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR VV+K+   S      + S S VRY ECQKNHAA +GG+AVDGCREFMA    G ++AL+CAACGCHRNFHRREVD EVV EYSPPN+++
Subjt:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH

Q9CA51 Mini zinc finger protein 11.2e-2763.37Show/hide
Query:  MKKRVVVVKK----SDGSGGRGNRSGSGSV-----VRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPN
        MKKR +V+K+    S+ S      S S S      VRY ECQKNHAA +GG+AVDGCREFMA G EGT +AL CAACGCHRNFHR+EVD EVV EYSPPN
Subjt:  MKKRVVVVKK----SDGSGGRGNRSGSGSV-----VRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPN

Query:  S
        +
Subjt:  S

Q9LJW5 Mini zinc finger protein 21.8e-2357.73Show/hide
Query:  MKKRVVVVKKSDGSGGRGNRSGSGSV----VRYAECQKNHAAKLGGFAVDGCREFMA-RGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNS
        M+KR VV++++       + S + S+    VRY ECQKNHAA +GG+AVDGCREFMA RGEEGT  AL+CAACGCHR+FHRRE++ EVV + + P S
Subjt:  MKKRVVVVKKSDGSGGRGNRSGSGSV----VRYAECQKNHAAKLGGFAVDGCREFMA-RGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNS

Q9SB61 Zinc-finger homeodomain protein 21.8e-2061.97Show/hide
Query:  SDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDA
        S G GG G   G G+ +RY EC KNHA  +GG AVDGC EFM  GE+GT +AL CAACGCHRNFHR+E ++
Subjt:  SDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDA

Arabidopsis top hitse value%identityAlignment
AT1G18835.1 mini zinc finger2.4e-2864.89Show/hide
Query:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        MKKR VV+K+   S      + S S VRY ECQKNHAA +GG+AVDGCREFMA    G ++AL+CAACGCHRNFHRREVD EVV EYSPPN+++
Subjt:  MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH

AT1G74660.1 mini zinc finger 18.3e-2963.37Show/hide
Query:  MKKRVVVVKK----SDGSGGRGNRSGSGSV-----VRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPN
        MKKR +V+K+    S+ S      S S S      VRY ECQKNHAA +GG+AVDGCREFMA G EGT +AL CAACGCHRNFHR+EVD EVV EYSPPN
Subjt:  MKKRVVVVKK----SDGSGGRGNRSGSGSV-----VRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPN

Query:  S
        +
Subjt:  S

AT2G02540.1 homeobox protein 212.1e-1957.97Show/hide
Query:  VVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH
        V++Y EC KNHAA +GG A+DGC EFM  GEEG+ EAL+C+ C CHRNFHRRE + E    +SP  + H
Subjt:  VVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDH

AT3G28917.1 mini zinc finger 21.2e-2457.73Show/hide
Query:  MKKRVVVVKKSDGSGGRGNRSGSGSV----VRYAECQKNHAAKLGGFAVDGCREFMA-RGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNS
        M+KR VV++++       + S + S+    VRY ECQKNHAA +GG+AVDGCREFMA RGEEGT  AL+CAACGCHR+FHRRE++ EVV + + P S
Subjt:  MKKRVVVVKKSDGSGGRGNRSGSGSV----VRYAECQKNHAAKLGGFAVDGCREFMA-RGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNS

AT4G24660.1 homeobox protein 221.3e-2161.97Show/hide
Query:  SDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDA
        S G GG G   G G+ +RY EC KNHA  +GG AVDGC EFM  GE+GT +AL CAACGCHRNFHR+E ++
Subjt:  SDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAGGGTGGTGGTGGTGAAGAAATCCGATGGGTCTGGGGGGCGAGGAAACCGGTCTGGTTCGGGCTCGGTCGTGCGCTATGCCGAGTGCCAGAAGAATCACGC
GGCGAAGCTCGGTGGGTTCGCGGTGGACGGTTGCCGTGAGTTCATGGCCAGAGGCGAGGAGGGGACTGAGGAGGCTCTCAGCTGCGCTGCTTGTGGCTGCCACCGGAATT
TTCATAGAAGAGAGGTGGATGCTGAAGTTGTTTTCGAGTATTCTCCTCCAAACTCCGATCATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAAGGGTGGTGGTGGTGAAGAAATCCGATGGGTCTGGGGGGCGAGGAAACCGGTCTGGTTCGGGCTCGGTCGTGCGCTATGCCGAGTGCCAGAAGAATCACGC
GGCGAAGCTCGGTGGGTTCGCGGTGGACGGTTGCCGTGAGTTCATGGCCAGAGGCGAGGAGGGGACTGAGGAGGCTCTCAGCTGCGCTGCTTGTGGCTGCCACCGGAATT
TTCATAGAAGAGAGGTGGATGCTGAAGTTGTTTTCGAGTATTCTCCTCCAAACTCCGATCATCATTGA
Protein sequenceShow/hide protein sequence
MKKRVVVVKKSDGSGGRGNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEEGTEEALSCAACGCHRNFHRREVDAEVVFEYSPPNSDHH