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CmoCh10G002060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G002060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCLAVATA3/ESR-RELATED
Genome locationCmo_Chr10:924449..924739
RNA-Seq ExpressionCmoCh10G002060
SyntenyCmoCh10G002060
Gene Ontology termsNA
InterPro domainsIPR038821 - CLE-related protein 45-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587538.1 hypothetical protein SDJN03_16103, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2473.86Show/hide
Query:  KVLFFLFLLAGFVFTLQPQTASGLATIDVALKWVAFKSPAIHTHKADDSVKKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNR
        K L F  LLAG    +QPQTASGL TID+ALKWVAFKSP  +TH   DSVKKL MKNM++APSP M+FDPNQSNKR VKKGSDPIHNR
Subjt:  KVLFFLFLLAGFVFTLQPQTASGLATIDVALKWVAFKSPAIHTHKADDSVKKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNR

KAG6589506.1 hypothetical protein SDJN03_14929, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4295.88Show/hide
Query:  MGFLFCRKVLFFLFLLAGFVFT-LQPQTASGLATIDVALKWVAFKSPAIHTHKADDSVKKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC
        MGFLFCRKVLFFLFLLAGFVF+ LQPQTASGLATIDVALKWVAFKSPAIHTHKADDS KKLNMKNMNVAPSP MNFDPNQSNKRRVKKGSDPIHNRC
Subjt:  MGFLFCRKVLFFLFLLAGFVFT-LQPQTASGLATIDVALKWVAFKSPAIHTHKADDSVKKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC

KDO55565.1 hypothetical protein CISIN_1g039594mg [Citrus sinensis]1.5e-1151.14Show/hide
Query:  FFLFLLAGFVFTLQPQTASGLATIDVALKWVAFKSPAIHTHKADDSV--KKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC
        F L +  GF+ +LQPQ  SGL +ID+ L+W     PA+   +   +V  K L M N ++AP+P++ FDPNQSNKR+V+KGSDPIHNRC
Subjt:  FFLFLLAGFVFTLQPQTASGLATIDVALKWVAFKSPAIHTHKADDSV--KKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC

KGN63668.1 hypothetical protein Csa_014085 [Cucumis sativus]4.3e-1966.34Show/hide
Query:  MGFLFCRKVLFFLFLLAGF---VFTLQPQ-TASGLATIDVALKWVAFKSP-AIHTHKADDSVKKLNMKNMNV-APSPTMNFDPNQSNKRRVKKGSDPIHN
        MG LF RK L F+F++A F   V   QPQ TA+GL+TID ALKWVAFKS   I+THKAD S    + KN+N+ APSP MNFDPNQSNKR VKKGSDPIHN
Subjt:  MGFLFCRKVLFFLFLLAGF---VFTLQPQ-TASGLATIDVALKWVAFKSP-AIHTHKADDSVKKLNMKNMNV-APSPTMNFDPNQSNKRRVKKGSDPIHN

Query:  R
        R
Subjt:  R

XP_006440599.1 CLAVATA3/ESR (CLE)-related protein 45 [Citrus clementina]2.6e-1151.14Show/hide
Query:  FFLFLLAGFVFTLQPQTASGLATIDVALKWVAFKSPAIHTHKADDSV--KKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC
        F L +  GF+ +LQPQ  SGL +ID  L+W     PA+   +   +V  K L M N ++AP+P++ FDPNQSNKR+V+KGSDPIHNRC
Subjt:  FFLFLLAGFVFTLQPQTASGLATIDVALKWVAFKSPAIHTHKADDSV--KKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC

TrEMBL top hitse value%identityAlignment
A0A067ENV6 Uncharacterized protein7.2e-1251.14Show/hide
Query:  FFLFLLAGFVFTLQPQTASGLATIDVALKWVAFKSPAIHTHKADDSV--KKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC
        F L +  GF+ +LQPQ  SGL +ID+ L+W     PA+   +   +V  K L M N ++AP+P++ FDPNQSNKR+V+KGSDPIHNRC
Subjt:  FFLFLLAGFVFTLQPQTASGLATIDVALKWVAFKSPAIHTHKADDSV--KKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC

A0A0A0LPD5 Uncharacterized protein2.1e-1966.34Show/hide
Query:  MGFLFCRKVLFFLFLLAGF---VFTLQPQ-TASGLATIDVALKWVAFKSP-AIHTHKADDSVKKLNMKNMNV-APSPTMNFDPNQSNKRRVKKGSDPIHN
        MG LF RK L F+F++A F   V   QPQ TA+GL+TID ALKWVAFKS   I+THKAD S    + KN+N+ APSP MNFDPNQSNKR VKKGSDPIHN
Subjt:  MGFLFCRKVLFFLFLLAGF---VFTLQPQ-TASGLATIDVALKWVAFKSP-AIHTHKADDSVKKLNMKNMNV-APSPTMNFDPNQSNKRRVKKGSDPIHN

Query:  R
        R
Subjt:  R

A0A314XM06 Uncharacterized protein1.2e-1150Show/hide
Query:  MGFLFCRKVLFFLFLLAGFVFTLQPQTASGLATIDVALKW----VAFKSPAIHTHKADDSVKKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC
        MGFL  R  +  LF+  GF+  LQP+  SGL ++D+AL+W    ++F   ++H  KA  +V+ L  K +++AP+P+M FDPNQSNKR+V+KGSDPIHNRC
Subjt:  MGFLFCRKVLFFLFLLAGFVFTLQPQTASGLATIDVALKW----VAFKSPAIHTHKADDSVKKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC

M5WYZ5 Uncharacterized protein1.2e-1150Show/hide
Query:  MGFLFCRKVLFFLFLLAGFVFTLQPQTASGLATIDVALKW----VAFKSPAIHTHKADDSVKKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC
        MGFL  R  +  LF+  GF+  LQP+  SGL ++D+AL+W    ++F   ++H  KA  +V+ L  K +++AP+P+M FDPNQSNKR+V+KGSDPIHNRC
Subjt:  MGFLFCRKVLFFLFLLAGFVFTLQPQTASGLATIDVALKW----VAFKSPAIHTHKADDSVKKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC

V4VM13 Uncharacterized protein1.2e-1151.14Show/hide
Query:  FFLFLLAGFVFTLQPQTASGLATIDVALKWVAFKSPAIHTHKADDSV--KKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC
        F L +  GF+ +LQPQ  SGL +ID  L+W     PA+   +   +V  K L M N ++AP+P++ FDPNQSNKR+V+KGSDPIHNRC
Subjt:  FFLFLLAGFVFTLQPQTASGLATIDVALKWVAFKSPAIHTHKADDSV--KKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTTGTTTTGCAGGAAAGTTTTGTTCTTTCTGTTTCTTCTTGCTGGTTTTGTCTTCACTCTCCAGCCTCAAACCGCATCTGGGCTCGCCACCATTGATGTTGC
TCTCAAATGGGTGGCCTTCAAATCCCCTGCTATCCACACCCACAAGGCTGATGATTCTGTGAAGAAGTTGAACATGAAGAACATGAACGTGGCTCCCTCTCCCACCATGA
ACTTCGACCCCAACCAATCCAACAAAAGAAGAGTCAAGAAAGGATCCGACCCCATTCACAACAGATGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCTTGTTTTGCAGGAAAGTTTTGTTCTTTCTGTTTCTTCTTGCTGGTTTTGTCTTCACTCTCCAGCCTCAAACCGCATCTGGGCTCGCCACCATTGATGTTGC
TCTCAAATGGGTGGCCTTCAAATCCCCTGCTATCCACACCCACAAGGCTGATGATTCTGTGAAGAAGTTGAACATGAAGAACATGAACGTGGCTCCCTCTCCCACCATGA
ACTTCGACCCCAACCAATCCAACAAAAGAAGAGTCAAGAAAGGATCCGACCCCATTCACAACAGATGCTAG
Protein sequenceShow/hide protein sequence
MGFLFCRKVLFFLFLLAGFVFTLQPQTASGLATIDVALKWVAFKSPAIHTHKADDSVKKLNMKNMNVAPSPTMNFDPNQSNKRRVKKGSDPIHNRC