; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh10G002130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G002130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCmo_Chr10:948889..950839
RNA-Seq ExpressionCmoCh10G002130
SyntenyCmoCh10G002130
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453211.1 PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo]6.5e-13996.03Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR+LSVKPV+ASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF GN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN

XP_022921659.1 chlorophyll a-b binding protein 4, chloroplastic [Cucurbita moschata]6.7e-144100Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN

XP_022987200.1 chlorophyll a-b binding protein 4, chloroplastic [Cucurbita maxima]2.5e-14399.6Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPV ASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN

XP_023516219.1 chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo]5.6e-14399.21Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPV ASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENL+WFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN

XP_038880569.1 chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida]2.5e-13895.63Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR LSVKPV+ASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF GN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN

TrEMBL top hitse value%identityAlignment
A0A0A0LSB4 Chlorophyll a-b binding protein, chloroplastic3.8e-13794.44Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSGKL R+LSVKPV+ASSSSSFKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPL LAEDPENL+W+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF GN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN

A0A1S3BV45 Chlorophyll a-b binding protein, chloroplastic3.1e-13996.03Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR+LSVKPV+ASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF GN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN

A0A5A7UWR2 Chlorophyll a-b binding protein, chloroplastic3.1e-13996.03Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR+LSVKPV+ASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF GN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN

A0A6J1E151 Chlorophyll a-b binding protein, chloroplastic3.2e-144100Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN

A0A6J1JG60 Chlorophyll a-b binding protein, chloroplastic1.2e-14399.6Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPV ASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic8.7e-6248.33Show/hide
Query:  AARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFT
        A ++ FL G   ++ + ++     + + S+   +  +  W PG   P +L+GSLPGD GFDPL L  DPE+LKW  QAELV+ RWAMLG AG+ +PE  T
Subjt:  AARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFT

Query:  KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTQEAKEKELANGRL
        KIG++N P WY AG+ EYF  ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL +     A  +E + KE+ NGRL
Subjt:  KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTQEAKEKELANGRL

Query:  AMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS
        AMLA +G   QH  TG GP +NL  H++DP H TI   FS
Subjt:  AMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS

P27521 Chlorophyll a-b binding protein 4, chloroplastic3.5e-12786.85Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASS-SSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNG
        MATVTT ASA++FRPC ++ RFLTGSSG+L+R LS   + +S+ +SSFKVEAKKGEWLPGL SP YL GSL GDNGFDPL LAEDPENLKWFVQAELVNG
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASS-SSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNG

Query:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQE
        RWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  EVGYPGGIFNPLNFAPTQE
Subjt:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQE

Query:  AKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS
        AKEKELANGRLAMLAFLGF+VQHNVTGKGPFENLLQH+SDPWHNTIVQTF+
Subjt:  AKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)1.1e-8877Show/hide
Query:  KGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYD-AGKAEYFASSSTLFVIEFILFHY
        KG WLPGL SPAYL+GSL GDNGFDPL+LAEDPE+L+WFVQA++VNGRWAMLGVAGML+PEV TK G++NAP+W    GK  YFASSST   +  +   Y
Subjt:  KGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYD-AGKAEYFASSSTLFVIEFILFHY

Query:  VEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSG
        VEIRRWQDIKNPGSVNQDPIFK YSLPP+E GYPG +FNPLNFAP  E KEKELANGRLAMLAFLGF+VQHNV GKGPFENL QH++DPWHNTI+QT SG
Subjt:  VEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSG

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic5.9e-12786.11Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR
        MATVTTQASAA+F PC  +SRFL GSSGKL+R ++ +PV  S S+SFKVEAKKGEWLPGL SP YL GSLPGDNGFDPL LAEDPENL+WFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA
        WAMLGVAGMLLPEVFT IGIIN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  EVGYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
        KEKE+ANGRLAMLAFLGFI+QHNVTGKGPF+NLLQHISDPWHNTIVQT  GN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic3.9e-6249.01Show/hide
Query:  TQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGE--WLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAM
        + A AA+  P      FL G   +L + L+V  V+   +S   V A      W PG   P +L+GSLPGD GFDPL L+ DP++LKW VQAE+V+ RWAM
Subjt:  TQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGE--WLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAM

Query:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APT
        LG AG+ +PE  TKIGI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   +VGYPGG+ F+PL +     A  
Subjt:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APT

Query:  QEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS
        +E + KE+ NGRLAMLA +G   QH  TG GP +NL  H++DP H TI   F+
Subjt:  QEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 63.1e-5441.22Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSS--GKL--HRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAEL
        + +  T +++ V  P   R    + SS  G+L   R++ V+     SS    +   +  W PG   P +L+GSLPGD GFDPL L  DP+ LKWF QAEL
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSS--GKL--HRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAEL

Query:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF--
        ++ RWAML V G+++PE   ++G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PGSV+ +P +     P  +VGYPGG++       
Subjt:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF--

Query:  ----APTQEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN
             P    + KE+ NGRLAMLAFLGF  Q   T + P ENL+ H++DP H  +   F+ +
Subjt:  ----APTQEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN

AT1G45474.1 photosystem I light harvesting complex gene 59.5e-5648.28Show/hide
Query:  SSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ
        SS    R+ SVK      + +  VE  +  WLPGL  P YL+G+L GD GFDPL L EDPE+LKW+VQAELV+ R+AMLGVAG+L  ++    GI N P 
Subjt:  SSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ

Query:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAP----TQEAKEKELANGRLAMLAFL
        WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   E GYPGG + NPL  A       + K KE+ NGRLAM+A L
Subjt:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAP----TQEAKEKELANGRLAMLAFL

Query:  GFIVQHNVTGKGPFENLLQHISDPWHNTIVQT
        GF VQ +VT  GP +NL++H+S+PWH TI+QT
Subjt:  GFIVQHNVTGKGPFENLLQHISDPWHNTIVQT

AT1G45474.2 photosystem I light harvesting complex gene 59.5e-5648.28Show/hide
Query:  SSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ
        SS    R+ SVK      + +  VE  +  WLPGL  P YL+G+L GD GFDPL L EDPE+LKW+VQAELV+ R+AMLGVAG+L  ++    GI N P 
Subjt:  SSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ

Query:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAP----TQEAKEKELANGRLAMLAFL
        WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   E GYPGG + NPL  A       + K KE+ NGRLAM+A L
Subjt:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAP----TQEAKEKELANGRLAMLAFL

Query:  GFIVQHNVTGKGPFENLLQHISDPWHNTIVQT
        GF VQ +VT  GP +NL++H+S+PWH TI+QT
Subjt:  GFIVQHNVTGKGPFENLLQHISDPWHNTIVQT

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A42.5e-12886.85Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASS-SSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNG
        MATVTT ASA++FRPC ++ RFLTGSSG+L+R LS   + +S+ +SSFKVEAKKGEWLPGL SP YL GSL GDNGFDPL LAEDPENLKWFVQAELVNG
Subjt:  MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASS-SSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNG

Query:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQE
        RWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  EVGYPGGIFNPLNFAPTQE
Subjt:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQE

Query:  AKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS
        AKEKELANGRLAMLAFLGF+VQHNVTGKGPFENLLQH+SDPWHNTIVQTF+
Subjt:  AKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS

AT3G61470.1 photosystem I light harvesting complex gene 22.8e-6349.01Show/hide
Query:  TQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGE--WLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAM
        + A AA+  P      FL G   +L + L+V  V+   +S   V A      W PG   P +L+GSLPGD GFDPL L+ DP++LKW VQAE+V+ RWAM
Subjt:  TQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGE--WLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAM

Query:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APT
        LG AG+ +PE  TKIGI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   +VGYPGG+ F+PL +     A  
Subjt:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APT

Query:  QEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS
        +E + KE+ NGRLAMLA +G   QH  TG GP +NL  H++DP H TI   F+
Subjt:  QEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGTCACTACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCGCCCGATCGAGATTCCTTACTGGTTCTTCCGGCAAACTCCACCGTATGCTGTCGGTTAA
ACCAGTCACTGCTTCGTCTTCTTCATCTTTCAAGGTTGAAGCCAAGAAGGGAGAGTGGTTGCCTGGTCTGCCATCTCCGGCATACTTAAATGGCAGTCTTCCAGGGGACA
ATGGATTTGACCCACTGTCTCTAGCCGAGGACCCAGAGAACTTGAAGTGGTTCGTGCAAGCGGAGCTGGTGAACGGCCGGTGGGCTATGCTGGGTGTCGCCGGAATGCTT
CTTCCGGAGGTTTTCACGAAGATCGGAATCATCAACGCTCCTCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCATCGTCTTCGACTCTGTTCGTGATCGAGTTCAT
CCTTTTCCATTACGTGGAAATCCGAAGGTGGCAGGACATCAAGAACCCCGGCAGCGTGAACCAAGACCCCATCTTCAAGCAATACAGTTTGCCCCCAAATGAAGTGGGTT
ACCCCGGTGGGATTTTCAACCCCCTCAATTTCGCTCCCACTCAGGAAGCCAAAGAGAAGGAACTAGCCAATGGGAGGCTTGCGATGTTGGCGTTTTTGGGGTTCATTGTG
CAACACAACGTGACAGGGAAGGGGCCGTTTGAGAACCTTTTGCAGCACATTTCTGACCCATGGCACAACACCATTGTGCAGACGTTCAGTGGCAACTAA
mRNA sequenceShow/hide mRNA sequence
GTCACGAAGGTGCAGGGTAACATGGGTGCATTTGTTCATTTTTTTACTTAAAGGTGTATGACATCTCAAGGCCACAAATGCATTTAGGTTTTATTAATCAACTCAAGCCA
CTCCAAGTTTGGTACAAAAAAGTGACACCTTTAGGAAATAAGCATATTACCAAAGTGGTCAATTTGAGGCCCAACTATGTTTCTACCCAATTTGAGGCCCAACTTTTAAC
CAAGCCCACTGGACCTCGCAGAGGCCCAGGTCAATTTAAGCGCATTTTTTAAAAATTGTTTAAAGTGGAGATTTCTTCTGATTGGAGGGCCACTTGTCATAGTCCAATTG
GCAAGTCAAGATTCCACGTGGATATATTCCTCAATCGTAACTCTGGCAGGAGACCCGCCCACGTAGGAAAGGTGTGGCCCCACATTATCATTTATCAACCAATGGAAGCA
TAGAAACAGATTGAAGATATTACTCAAAGGATAAAGCGATAAGGCCCCGTCGTCCCCTTCGGGCAGTCCAGAACTCCCGACCAATTTCCAGCCGTTAGATCGTGAAAATC
TCGTGAATGAACCCTCAGATCTGAAGAGCGAACAAGAACCACAAACTTAGCATGGAAGTGATGTTACAAAGGCCTCCAAATTACTCCCCCATTTCTTCCTCAATCTCCCC
CACACAAAAGTAGATCGTTCAGGAGAGATGGCCACCGTCACTACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCGCCCGATCGAGATTCCTTACTGGTTCTTCCGG
CAAACTCCACCGTATGCTGTCGGTTAAACCAGTCACTGCTTCGTCTTCTTCATCTTTCAAGGTTGAAGCCAAGAAGGGAGAGTGGTTGCCTGGTCTGCCATCTCCGGCAT
ACTTAAATGGCAGTCTTCCAGGGGACAATGGATTTGACCCACTGTCTCTAGCCGAGGACCCAGAGAACTTGAAGTGGTTCGTGCAAGCGGAGCTGGTGAACGGCCGGTGG
GCTATGCTGGGTGTCGCCGGAATGCTTCTTCCGGAGGTTTTCACGAAGATCGGAATCATCAACGCTCCTCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCATCGTC
TTCGACTCTGTTCGTGATCGAGTTCATCCTTTTCCATTACGTGGAAATCCGAAGGTGGCAGGACATCAAGAACCCCGGCAGCGTGAACCAAGACCCCATCTTCAAGCAAT
ACAGTTTGCCCCCAAATGAAGTGGGTTACCCCGGTGGGATTTTCAACCCCCTCAATTTCGCTCCCACTCAGGAAGCCAAAGAGAAGGAACTAGCCAATGGGAGGCTTGCG
ATGTTGGCGTTTTTGGGGTTCATTGTGCAACACAACGTGACAGGGAAGGGGCCGTTTGAGAACCTTTTGCAGCACATTTCTGACCCATGGCACAACACCATTGTGCAGAC
GTTCAGTGGCAACTAAATTTGGTTTGTAGGAAGAGAAGGTTGGTGTGTTAAAAGTAAATGGTTGAGATTGTTTTGAGAGCTTGTTTTTGGAATGTGATATGAAACAACAT
AGTGGATCTCAGTGTACAGTGGTGGGAGGCTTCCCATGTAGCTTGGATGTTGTTTAAATGACACGATCCTTCCACTTATTACACATTCCATGAACATGAATTGCCTTTTG
CAGCTTCATTCATATTCAAACTCTAAATTATCAAAACTTTCTTATAATTCTAACGAGAGAGTCTTAACAAGTCAAGATATTATAAACATCTTACCAAAAACCGAAGAACG
CCACGCCCC
Protein sequenceShow/hide protein sequence
MATVTTQASAAVFRPCAARSRFLTGSSGKLHRMLSVKPVTASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLSLAEDPENLKWFVQAELVNGRWAMLGVAGML
LPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFIV
QHNVTGKGPFENLLQHISDPWHNTIVQTFSGN