| GenBank top hits | e value | %identity | Alignment |
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| AAT07563.1 putative polyprotein [Oryza sativa Japonica Group] | 0.0e+00 | 49.2 | Show/hide |
Query: MSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIII-NPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGIT
+S+P IS KLT++N+ LW+ QIL LR L + + AP+ I E ++ KI+I NPE+ W+ QDQ VL I SS++ EVL + G
Subjt: MSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIII-NPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGIT
Query: TAREAWITLERQFA------------STIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSI--TTRTDVYTVSDVYAHMLSYEMRHL
TA +AW ++ F+ ++++Y K++ L D +AA GK +++EEL+AY++ GL ++D V + T R ++S VY+ +LSYE R +
Subjt: TAREAWITLERQFA------------STIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSI--TTRTDVYTVSDVYAHMLSYEMRHL
Query: RKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQ--LNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQAALA
R +SAN NR RGG G+RG R GHG+ + + GR + + VCQ+C K H A CWHR+D +Y + L A A
Subjt: RKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQ--LNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQAALA
Query: TSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGSS--LVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYF
T Y DTNWYVDTGATDHIT L++LTT+ERY GTDQI A+G G SI H+G++++ S L LK++L+VP+ K+L+SV +L +DN A +E H YF
Subjt: TSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGSS--LVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYF
Query: LVKDRVTKKLLLHGRCKNGLYVLPHNFS-QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQ
L+KD+ T++ +L G C+ GLY LP S + A S +WH RLGHP+ PI +RIL N L +N + S+C+ACQ K HQLPF S VS PL+
Subjt: LVKDRVTKKLLLHGRCKNGLYVLPHNFS-QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQ
Query: LIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLV
LIH+DVWGP+ SV KYYVSF+DD+S++VWIYFL+ KS+V F +FQK VE + KI S+Q+DWGGEY +LH +F GI HH+SCPHTHQQNG V
Subjt: LIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLV
Query: ERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKG
ERKHRHIVE GL+LLA A+MPL +WDEAF A +LINR+PS+ I+ DTPL +LF ++PDY LR FGCACWPNLRPYN KL FR+ +C+FLG+S+ HKG
Subjt: ERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKG
Query: YKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALA---------------KLANFYTENALTDIEPVVSNSHMND----------GQ
+KCL+ STGR+Y+SRDV FDE +FPF P LLP L N NA TDI S ++N G
Subjt: YKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALA---------------KLANFYTENALTDIEPVVSNSHMND----------GQ
Query: TDNIASDNL---------------------------SGVSLSSADNTRSSEEIA---EYEAESSSINAQNQTHEHVSDQPTEAASQHPM---RTRLRNNI
++A ++ SG+ + A + +S A A +SS Q+H+ S P+E+A + +TRL++ I
Subjt: TDNIASDNL---------------------------SGVSLSSADNTRSSEEIA---EYEAESSSINAQNQTHEHVSDQPTEAASQHPM---RTRLRNNI
Query: VQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKAR
+ K +TDGT+RYS ++ EP+ L EA+ W+ AM+ E AL +N TW LVP K G N+ID KWVYKVKRKADGS++R KAR
Subjt: VQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKAR
Query: LVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTG
+VAKGFKQR+G+DY DTF+PV+K +TIR ILS+A+++GW +RQ+D+QNAFLHG+L+E+V+MRQPPG++ + Y+CKL KALYGLKQAP+AW+SRL+
Subjt: LVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTG
Query: KLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCK
KL ELGFK+S +D+SLF ++ ++ML+YVDDII+ SSS AT L++ L +FA+KDLG L YFLGIEVK+ +GI+L+Q +YA+D+LKRVNM CK
Subjt: KLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCK
Query: PMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDADW
++TP+ +EKL +G P E+ +YRS VGALQYLT+TRPDL+F+VNKVCQYLH PT HW A KRILRY+K T+ LG+KI KS ++++S FSDADW
Subjt: PMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDADW
Query: AGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHF
AGC DDR ST GFAVF+G NL+SWS+RKQATVSRSSTEAEYKA+AN+TAE++WI++LL ELG+ K ++WCDN+GA Y+T+NPVFHARTKHIEVD+HF
Subjt: AGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHF
Query: VREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
VRE+VARK ++V +IS+ DQVAD TK LS NNLN+
Subjt: VREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
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| KAG8087752.1 hypothetical protein GUJ93_ZPchr0010g8288 [Zizania palustris] | 0.0e+00 | 51.33 | Show/hide |
Query: ILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS-----------
++P L S NL+G+ DGS AP + I+V P+ E +++ NP F W QDQ+V+S I SS++E+VL ++ T+ + W LER FAS
Subjt: ILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS-----------
Query: ----------TIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEM---RHLRKGTFEQ-LSSANNVN
+ DYF K+K++ DTL+A G + +E++++Y+L GLGP Y+ LV S+ ++ ++ D+Y++++S+E ++ +G + +SSAN V+
Subjt: ----------TIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEM---RHLRKGTFEQ-LSSANNVN
Query: R-ISIRGGANGGRG----SRGRSRQLNSGHGQSRRTVN-NPGRQPSKTQSSSGI---------VCQICGKPNHDALQCWHRFDQAYQAENNLKQAALATS
R GG GGRG RGR R G Q N N G+Q + + CQIC K HDAL CW+R+ + Y E++ A
Subjt: R-ISIRGGANGGRG----SRGRSRQLNSGHGQSRRTVN-NPGRQPSKTQSSSGI---------VCQICGKPNHDALQCWHRFDQAYQAENNLKQAALATS
Query: GYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGSS--LVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYFLV
Y DTNWY+D+GATDHIT+D++RL R Y G +Q+QVANGAGL I H G++ ISGSS L L +IL+VP I+KHL+SV +LA DNNA +EFHP F V
Subjt: GYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGSS--LVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYFLV
Query: KDRVTKKLLLHGRCKNGLYVLPHNFS-----QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAP
KD+ T+++L HG CK GLY L + S L +K+ + WHRRLGHP+S I +L+ +L + S +C+ACQ K+H+LPF SS VST+P
Subjt: KDRVTKKLLLHGRCKNGLYVLPHNFS-----QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAP
Query: LQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNG
L+L+H+DVWGP+I+SV+ KYYV F+DDFSR+ W+Y L+ KSDVE F+QF+ E LN KI++VQSD GGEY +LH+ F S GI H +SCPHT QQNG
Subjt: LQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNG
Query: LVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSH
+ ERKHRH+VETGLALLAQ+++PL +WDEAF +AC+LINRMPSR +P+ +LF K DYS+LRVFGCACWP LRPY ++K+ FR+TRC+FLGYS H
Subjt: LVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSH
Query: KGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLANFYTENALTDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSADNTRSS
KGYKCL+ TGRIYISRDV FDE IFPF ++ + T + + + +L++ + + +EPV+ H+ Q N + + + + D+T ++
Subjt: KGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLANFYTENALTDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSADNTRSS
Query: EEIAEYEAESSSINAQNQTHEHVSDQPTEAASQHPMR--TRLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMN
+ + E+ S + +S + A Q R TRL + I + K+FTDGT+RY R F +++++ EP + EA + P WR AM
Subjt: EEIAEYEAESSSINAQNQTHEHVSDQPTEAASQHPMR--TRLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMN
Query: DELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGI
E AL RN TW L+P + N++ +W++KVK KADG+++R KARLVAKGF QR G+DY DTFSPV+KP+T+R++LSLAV++GW++RQ+DIQNAFLHG
Subjt: DELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGI
Query: LKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKI
L EEVYM+QPPGF++S P+ YICKL KALYGLKQAP+AW+ +L+ KL LGF AS +DSSLFIL ++IYML+YVDDIII SS+ +++L+Q+L
Subjt: LKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKI
Query: DFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQ
+FAVKDLG L YFLGIE DG++L+Q +Y DLL+R NM+ CKP TPM S EKL RE G L +E F YRSTVGALQYLT+TRPD++FAVNKVCQ
Subjt: DFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQ
Query: YLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWI
+LH PTDAHW AVKRILRY+KGT +G+KI++S + LS FSDADWAGCPDDRRST GFA+F G NL+SWSSRKQ+T+SRSSTEAEYKA+AN TAE+IW+
Subjt: YLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWI
Query: KSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
+SLL+EL V P+LWCDNLGATYLT+NPVFHARTKHIE+D HFVRE+V R +EV+FISS+DQVADI TKPL + F +LN+
Subjt: KSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
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| pir|T02087| gag/pol polyprotein - maize retrotransposon Hopscotch [Zea mays] | 0.0e+00 | 50.1 | Show/hide |
Query: ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLE
+S KLT+ NYLLW Q+LP +R+ L + G P +TI S+ + + NP + W +DQ VL + SS++ EVLS++V +T+ W TL
Subjt: ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLE
Query: RQF---------------------ASTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMR-HLRK
+ AS++A+YF K++ D L A GK ++DEE ++++L GL D++PLVT++ R+D T D+Y +LSYE R HL+
Subjt: RQF---------------------ASTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMR-HLRK
Query: GTFEQLSSANNVNRISIRGGANGGRGSRGRSRQLNSGHGQSRRTVNNPGR-----QPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQAAL
G+ + S+ N R RG + G G RG SR G G SR + GR + +SS CQ+C + H AL CW+RFD+ Y + +A
Subjt: GTFEQLSSANNVNRISIRGGANGGRGSRGRSRQLNSGHGQSRRTVNNPGR-----QPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQAAL
Query: ATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI--SGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNY
+G S+ WY DTGATDHIT DL+RLT ++YTGTDQI ANG G++IS+IGN+++ S SL L+ +L+VP +K+LISV RL +DN+ +EFH ++
Subjt: ATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI--SGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNY
Query: FLVKDRVTKKLLLHGRCKNGLYVLP--------HNFSQALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQ
FL+KDR TK +LLHG+C++GLY LP HNFS + ++ E WH+RLGHP+ I R++ +NNL +N ++S+C+AC KAHQLP+ S
Subjt: FLVKDRVTKKLLLHGRCKNGLYVLP--------HNFSQALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQ
Query: HVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPH
S+APL LI +DV+GP+I S KYYVSF+DD+S++ WIY LR KSDV F +FQ VE M KI + QSDWGGEY +L+ +FK+ GI H +SCPH
Subjt: HVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPH
Query: THQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFL
THQQNG ERKHRHIVE GLALLAQ++MPL YWD AF A +LINR PS+TI DTPLHKL G +PDYS LR+FGCACWPNLRPYN KL FR+TRC+FL
Subjt: THQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFL
Query: GYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLANFYTENA-----LTDIEPVVSNSHMNDGQTDNIASDNL---
GYS+ HKG+KCL+ STGRIYISRDVVFDE++FPF +LLP + N T++A + P ++ H G ++ S+N
Subjt: GYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLANFYTENA-----LTDIEPVVSNSHMNDGQTDNIASDNL---
Query: ----------------------------SGVSLSS-----ADNTRSSEEIAE------------YEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRLR
+GVS ++ AD+ S +A +A SS+ H+ P AA+ RTRL+
Subjt: ----------------------------SGVSLSS-----ADNTRSSEEIAE------------YEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRLR
Query: NNIVQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERL
+ I + KQFTDGT+RY + + TEP ++ EA+ P+WR AM E AL++N TW LVPP NLID KWV+KVK ADGS++RL
Subjt: NNIVQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERL
Query: KARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSR
KARLVAKGFKQ++G+DY DTFSPV+K STIR++LSLAV++ W++RQ+D+QNAFLHGIL+E VYM+QPPGF D+ P NY C L+K+LYGLKQ P+AW+SR
Subjt: KARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSR
Query: LTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNME
L+ KL LGF S AD SLFI IY+L+YVDDIII SS A + ++ KLK DFA+KDLG L YFLGIEV + DG++L Q +YA DLLKRV ME
Subjt: LTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNME
Query: KCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSD
CKP+ TP+ ++EKL G LS EE KYRS VGALQYLT+TRPDL++A+N+VCQ+LH PTD HW AVKRILR ++ T+ LG+ I+ S ++MLS FSD
Subjt: KCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSD
Query: ADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVD
ADWAGCPDDR+ST G+A+FLG NLISW+S+KQ+TVSRSSTEAEYKA+AN TAE+IW++SLL ELG+ + PRLWCDNLGATYL+S P+F+ARTKHIEVD
Subjt: ADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVD
Query: FHFVREQVARKAMEVRFISSSDQVADILTKPLS
FHFVR++V K +++R IS++DQVAD TK L+
Subjt: FHFVREQVARKAMEVRFISSSDQVADILTKPLS
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| QCC26836.1 Hopscotch gagpol polyprotein [Zea mays] | 0.0e+00 | 50.1 | Show/hide |
Query: ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLE
+S KLT+ NYLLW Q+LP +R+ L + G P +TI S+ + + NP + W +DQ VL + SS++ EVLS++V +T+ W TL
Subjt: ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLE
Query: RQF---------------------ASTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMR-HLRK
+ AS++A+YF K++ D L A GK ++DEE ++++L GL D++PLVT++ R+D T D+Y +LSYE R HL+
Subjt: RQF---------------------ASTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMR-HLRK
Query: GTFEQL-SSANNVNR-ISIRGGANGGRG-SRGRSRQLNSGHGQSRRTVNNPGR-----QPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQ
G+ + SSAN +R + G +GGRG SRGR R G G SR + GR + +SS CQ+C + H AL CW+RFD+ Y +
Subjt: GTFEQL-SSANNVNR-ISIRGGANGGRG-SRGRSRQLNSGHGQSRRTVNNPGR-----QPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQ
Query: AALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI--SGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFH
+A +G S+ WY DTGATDHIT DL+RLT ++YTGTDQI ANG G++IS+IGN+++ S SL L+ +L+VP +K+LISV RL +DN+ +EFH
Subjt: AALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI--SGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFH
Query: PNYFLVKDRVTKKLLLHGRCKNGLYVLP--------HNFSQALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFG
++FL+KDR TK +LLHG+C++GLY LP HNFS + ++ E WH+RLGHP+ I R++ +NNL +N ++S+C+AC KAHQLP+
Subjt: PNYFLVKDRVTKKLLLHGRCKNGLYVLP--------HNFSQALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFG
Query: SSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHIS
S S+APL LI +DV+GP+I S KYYVSF+DD+S++ WIY LR KSDV F +FQ VE M KI + QSDWGGEY +L+ +FK+ GI H +S
Subjt: SSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHIS
Query: CPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRC
CPHTHQQNG ERKHRHIVE GLALLAQ++MPL YWD AF A +LINR PS+TI DTPLHKL G +PDYS LR+FGCACWPNLRPYN KL FR+TRC
Subjt: CPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRC
Query: IFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLANFYTENA-----LTDIEPVVSNSHMNDGQTDNIASDNL
+FLGYS+ HKG+KCL+ STGRIYISRDVVFDE++FPF +LLP + N T++A + P ++ H G ++ S+N
Subjt: IFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLANFYTENA-----LTDIEPVVSNSHMNDGQTDNIASDNL
Query: -------------------------------SGVSLSS-----ADNTRSSEEIAE------------YEAESSSINAQNQTHEHVSDQPTEAASQHPMRT
+GVS ++ AD+ S +A +A SS+ H+ P AA+ RT
Subjt: -------------------------------SGVSLSS-----ADNTRSSEEIAE------------YEAESSSINAQNQTHEHVSDQPTEAASQHPMRT
Query: RLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSV
RL++ I + KQFTDGT+RY + + TEP ++ EA+ P+WR AM E AL++N TW LVPP NLID KWV+KVK ADGS+
Subjt: RLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSV
Query: ERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAW
+RLKARLVAKGFKQ++G+DY DTFSPV+K STIR++LSLAV++ W++RQ+D+QNAFLHGIL+E VYM+QPPGF D+ P NY C L+K+LYGLKQAP+AW
Subjt: ERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAW
Query: HSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRV
+SRL+ KL LGF S AD SLFI IY+L+YVDDIII SS A + ++ KLK DFA+KDLG L YFLGIEV + DG++L Q +YA DLLKRV
Subjt: HSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRV
Query: NMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSG
ME CKP+ TP+ ++EKL G LS EE KYRS VGALQYLT+TRPDL++A+N+VCQ+LH PTD HW AVKRILR ++ T+ LG+ I+ S ++MLS
Subjt: NMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSG
Query: FSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHI
FSDADWAGCPDDR+ST G+A+FLG NLISW+S+KQ+TVSRSSTEAEYKA+AN TAE+IW++SLL ELG+ + PRLWCDNLGATYL+S P+F+ARTKHI
Subjt: FSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHI
Query: EVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
EVDFHFVR++V K +++R IS++DQVAD TK L+ NLN+
Subjt: EVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
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| XP_035817309.1 uncharacterized protein LOC100279596 isoform X1 [Zea mays] | 0.0e+00 | 47.96 | Show/hide |
Query: MSIPNNTM------SSPSIS-----QVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSL
M++ N+T SSPS+S I+V+LT+EN+ LW Q P LR+ L G+VDGS+ APS+ I E + + NP + +WY QDQLVLS
Subjt: MSIPNNTM------SSPSIS-----QVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSL
Query: INSSVTEEVLSTMVGITTAREAWITLERQFAS----------------------TIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTS
+ SS++E++L M TA + W L +S T + YF+++K DT+A++G + DEE++ YML GLG +++PLV +
Subjt: INSSVTEEVLSTMVGITTAREAWITLERQFAS----------------------TIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTS
Query: ITTRTDVYTVSDVYAHMLSYEMRHLRKG-TFEQLSSANNVNRISIRGGANGGRGSRGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHD
IT R D +++ ++ +LS E+R R T E LSSAN R G G RG R R G G R ++ G +P+ CQ+CGK HD
Subjt: ITTRTDVYTVSDVYAHMLSYEMRHLRKG-TFEQLSSANNVNRISIRGGANGGRGSRGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHD
Query: ALQCWHRFDQAYQAENNLKQAALA--TSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGSS--LVLKHILYVPK
AL+C+ RF+ A+Q E++ ++A + T Y DT+W +D+GA DH+T+DL+RLTT ER++G D +QVANG+GLSISH G SL+ GSS L L+++L+VP
Subjt: ALQCWHRFDQAYQAENNLKQAALA--TSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGSS--LVLKHILYVPK
Query: INKHLISVQRLASDNNAVVEFHPNYFLVKDRVTKKLLLHGRCKNGLYVL---PHNFSQ----ALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTN
++ HL+S RLASDNN +E HPN+F VKDRVT+K LL G+ NGLY + PH+ S L S + WH+RLGHP+ I +L+ N LA +
Subjt: INKHLISVQRLASDNNAVVEFHPNYFLVKDRVTKKLLLHGRCKNGLYVL---PHNFSQ----ALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTN
Query: IPSSSICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDW
SSS+C++CQ K HQLPF S HVS++PL+L+H+DVWGP+I SV KYYVSF+DD+SRY WIY L+ KSDVE F FQKHVE +LN KIR QSDW
Subjt: IPSSSICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDW
Query: GGEYHRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGC
GGEY RL + STGI+H ++CPHT QQNG+ ERK+RHIVETGLALLA +++P+ +WDEAF TAC+LINRMP+RT+ TPL +F + P+YS+LRVFGC
Subjt: GGEYHRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGC
Query: ACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKP---PNKTTNPHHPVLLPALAKLANFYTENALTDIEPV
ACWPNLRPYNN KLSFR+ +C+FLGYSS HKGYKCL+RS GRIYISRDVVFDE++FPF S P P+ + H P L +N E + +
Subjt: ACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKP---PNKTTNPHHPVLLPALAKLANFYTENALTDIEPV
Query: VSNSHMNDGQTDNIASDNLSGVSLS--SADNTRSSEEIAEYEAESSSI-NAQNQTHEH---------VSDQPTEAASQHP--------------------
S+ N + D + + +D +S A SS + A +H H S P +A S P
Subjt: VSNSHMNDGQTDNIASDNLSGVSLS--SADNTRSSEEIAEYEAESSSI-NAQNQTHEH---------VSDQPTEAASQHP--------------------
Query: -------------------------------------------------------------MRTRLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPI
+ TRLRNNI + TDGTIRY+ +SR F +
Subjt: -------------------------------------------------------------MRTRLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPI
Query: IETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVI
P N A+ + +WR AM+ E +AL +N TW LVP G N+I KWV+++K ADGSV++ KARLVA+GF Q+ G+DY +TFSPV+K ST+R++
Subjt: IETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVI
Query: LSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLI
LS+A+++ W++RQ+DI NAFLHG+L E+VYM QPPGFQD +KP ++CKL KA+YGLKQ+P+AW+SRL+ +L +LGF SVAD+SLF + +Y+L+
Subjt: LSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLI
Query: YVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRS
YVDDIIIVSSS T+ L+Q+L + F VKDLG L +FLGIEV G+ L+Q++YA D+L+R +ME CK + TP+ +KL R G L ++ F YRS
Subjt: YVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRS
Query: TVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQA
VGALQYLT+TRPDL+FAVNKVCQ+L P D HW AVKRILR+VKGTL G+ ++K+ + +LS F+DADWAGC DDRRST GFA+F G+NLISWS+RKQ
Subjt: TVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQA
Query: TVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLS
TVSRSSTEAEYKA+AN TAE IWI+SLLKEL + Q + P LWCDNLGATYL++NPVFH R KH+EVDFHFVRE+VA A++VR ISS DQ+ADI TKP +
Subjt: TVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLS
Query: KTPFTTHCNNLNMYKT
K NLN+ T
Subjt: KTPFTTHCNNLNMYKT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A3L6Q0W7 Putative polyprotein | 0.0e+00 | 48.02 | Show/hide |
Query: MSIPNNTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLS
M+ ++T ++P ++ KL++ N+ LW Q+L +R G ++G AP I + ++ G NP F WY +DQ +L + SS ++V +
Subjt: MSIPNNTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLS
Query: TMVGITTAREAWITLERQFAS---------------------TIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSD
+ TA +AW +E+ F++ +I DY K+K D LAA+GK ++DEEL+A++ GL DY+P+VTS+TTR D ++ D
Subjt: TMVGITTAREAWITLERQFAS---------------------TIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSD
Query: VYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRG-GANGGRGSRGRSRQLNSGHGQSRRTVNNPGRQP---SKTQSSSGIVCQICGKPNHDALQCWHRFD
+YA +LS+E R + AN RG G GRG RGR + G+G ++ N GRQP + S +CQIC K H A +CWHRFD
Subjt: VYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRG-GANGGRGSRGRSRQLNSGHGQSRRTVNNPGRQP---SKTQSSSGIVCQICGKPNHDALQCWHRFD
Query: QAYQAENNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI--SGSSLVLKHILYVPKINKHLISVQRL
+ Y E AA+A + Y DTNWY DTGATDHIT+DL +LT RE+Y G DQI A+G+G+ I ++G++ + SL L ++L+VPK K+L+SV RL
Subjt: QAYQAENNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI--SGSSLVLKHILYVPKINKHLISVQRL
Query: ASDNNAVVEFHPNYFLVKDRVTKKLLLHGRCKNGLYVLPHNFS--QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAH
A DN+A +EFHP++FL+KD+ T+ +L G C+ GLY LP + S QA K + +WH RLGHP+ PI +++ NNL+ + S+C+ACQ K+H
Subjt: ASDNNAVVEFHPNYFLVKDRVTKKLLLHGRCKNGLYVLPHNFS--QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAH
Query: QLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGI
QLP+ S ++ PL+L+H+DVWGP++ SV +YYVSFVDDFSR+ WIYFL+ KS+V F +FQK VE + KI ++Q+DWGGEY +L+++F GI
Subjt: QLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGI
Query: EHHISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSF
HH+SCPH HQQNG++ERKHRHIVE GL+LLA A+MPL +WDEAF A FLINR+PS+ I TP +L + P+Y LR FGCACWPNLRPYN KL
Subjt: EHHISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSF
Query: RTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESK--------------PPN---------------KTTNPHHPVLLPALAKLANFY-
R+ +C FLGYS+ HKGYKCL+ +GR+YISRDV+FDE +FPF PP +TNP + A +
Subjt: RTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESK--------------PPN---------------KTTNPHHPVLLPALAKLANFY-
Query: --TENALTDIEPVVSNSHMNDGQTDNIASDNLSGVSLSS--ADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQHP--MRTRLRNNIVQAKQF
TE PV S + D + G + +S A T ++ A + + P+ A++ P RTRLR+ I + K +
Subjt: --TENALTDIEPVVSNSHMNDGQTDNIASDNLSGVSLSS--ADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQHP--MRTRLRNNIVQAKQF
Query: TDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGF
TDGT+RY + EP++L EA+ W+ AM+ E AL N TW LVPPK GIN+ID KWVYKVKRK+DGS++R KARLVAKGF
Subjt: TDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGF
Query: KQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELG
+QR+G+DY DTFSPV+KP+TIR IL +AV++GW++R++D+QNAFLHG L+E+VYM+QPPG+QD +K YICKL KALYGLK+AP+AW+SRL+ KL +LG
Subjt: KQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELG
Query: FKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPM
FKAS AD+SLF + IY+LIYVDDII+ SS+ +AT L+Q L+ +FA+KDLG L +FLGIEVKK +GI+L+Q +YA D+L+R +M +CKP+S+P+
Subjt: FKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPM
Query: GSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDADWAGCPDD
++EKL +G PL ++ YRS VG LQYL +TRPD++FAVNKVCQYLH PT HW VKRILRY+K T+ +G+KI KS ++++S FSDADWAG DD
Subjt: GSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDADWAGCPDD
Query: RRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVA
RRST GFAVFLG+NLISWS+RKQ+TVSRSSTEAEYKA+AN TAE++WI++LL ELG+ K +LWCDN+GA YL++NPVFHARTKHIEVD+HFVRE+VA
Subjt: RRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVA
Query: RKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
R+ +++ +IS+ DQ+A+ TKPL+ NNLN+
Subjt: RKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
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| A0A4D6GKR5 Hopscotch gagpol polyprotein | 0.0e+00 | 50.1 | Show/hide |
Query: ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLE
+S KLT+ NYLLW Q+LP +R+ L + G P +TI S+ + + NP + W +DQ VL + SS++ EVLS++V +T+ W TL
Subjt: ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLE
Query: RQF---------------------ASTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMR-HLRK
+ AS++A+YF K++ D L A GK ++DEE ++++L GL D++PLVT++ R+D T D+Y +LSYE R HL+
Subjt: RQF---------------------ASTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMR-HLRK
Query: GTFEQL-SSANNVNR-ISIRGGANGGRG-SRGRSRQLNSGHGQSRRTVNNPGR-----QPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQ
G+ + SSAN +R + G +GGRG SRGR R G G SR + GR + +SS CQ+C + H AL CW+RFD+ Y +
Subjt: GTFEQL-SSANNVNR-ISIRGGANGGRG-SRGRSRQLNSGHGQSRRTVNNPGR-----QPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQ
Query: AALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI--SGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFH
+A +G S+ WY DTGATDHIT DL+RLT ++YTGTDQI ANG G++IS+IGN+++ S SL L+ +L+VP +K+LISV RL +DN+ +EFH
Subjt: AALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI--SGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFH
Query: PNYFLVKDRVTKKLLLHGRCKNGLYVLP--------HNFSQALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFG
++FL+KDR TK +LLHG+C++GLY LP HNFS + ++ E WH+RLGHP+ I R++ +NNL +N ++S+C+AC KAHQLP+
Subjt: PNYFLVKDRVTKKLLLHGRCKNGLYVLP--------HNFSQALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFG
Query: SSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHIS
S S+APL LI +DV+GP+I S KYYVSF+DD+S++ WIY LR KSDV F +FQ VE M KI + QSDWGGEY +L+ +FK+ GI H +S
Subjt: SSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHIS
Query: CPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRC
CPHTHQQNG ERKHRHIVE GLALLAQ++MPL YWD AF A +LINR PS+TI DTPLHKL G +PDYS LR+FGCACWPNLRPYN KL FR+TRC
Subjt: CPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRC
Query: IFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLANFYTENA-----LTDIEPVVSNSHMNDGQTDNIASDNL
+FLGYS+ HKG+KCL+ STGRIYISRDVVFDE++FPF +LLP + N T++A + P ++ H G ++ S+N
Subjt: IFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLANFYTENA-----LTDIEPVVSNSHMNDGQTDNIASDNL
Query: -------------------------------SGVSLSS-----ADNTRSSEEIAE------------YEAESSSINAQNQTHEHVSDQPTEAASQHPMRT
+GVS ++ AD+ S +A +A SS+ H+ P AA+ RT
Subjt: -------------------------------SGVSLSS-----ADNTRSSEEIAE------------YEAESSSINAQNQTHEHVSDQPTEAASQHPMRT
Query: RLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSV
RL++ I + KQFTDGT+RY + + TEP ++ EA+ P+WR AM E AL++N TW LVPP NLID KWV+KVK ADGS+
Subjt: RLRNNIVQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSV
Query: ERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAW
+RLKARLVAKGFKQ++G+DY DTFSPV+K STIR++LSLAV++ W++RQ+D+QNAFLHGIL+E VYM+QPPGF D+ P NY C L+K+LYGLKQAP+AW
Subjt: ERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAW
Query: HSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRV
+SRL+ KL LGF S AD SLFI IY+L+YVDDIII SS A + ++ KLK DFA+KDLG L YFLGIEV + DG++L Q +YA DLLKRV
Subjt: HSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRV
Query: NMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSG
ME CKP+ TP+ ++EKL G LS EE KYRS VGALQYLT+TRPDL++A+N+VCQ+LH PTD HW AVKRILR ++ T+ LG+ I+ S ++MLS
Subjt: NMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSG
Query: FSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHI
FSDADWAGCPDDR+ST G+A+FLG NLISW+S+KQ+TVSRSSTEAEYKA+AN TAE+IW++SLL ELG+ + PRLWCDNLGATYL+S P+F+ARTKHI
Subjt: FSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHI
Query: EVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
EVDFHFVR++V K +++R IS++DQVAD TK L+ NLN+
Subjt: EVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
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| Q75G45 Putative polyprotein | 0.0e+00 | 49.2 | Show/hide |
Query: MSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIII-NPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGIT
+S+P IS KLT++N+ LW+ QIL LR L + + AP+ I E ++ KI+I NPE+ W+ QDQ VL I SS++ EVL + G
Subjt: MSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIII-NPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGIT
Query: TAREAWITLERQFA------------STIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSI--TTRTDVYTVSDVYAHMLSYEMRHL
TA +AW ++ F+ ++++Y K++ L D +AA GK +++EEL+AY++ GL ++D V + T R ++S VY+ +LSYE R +
Subjt: TAREAWITLERQFA------------STIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSI--TTRTDVYTVSDVYAHMLSYEMRHL
Query: RKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQ--LNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQAALA
R +SAN NR RGG G+RG R GHG+ + + GR + + VCQ+C K H A CWHR+D +Y + L A A
Subjt: RKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQ--LNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQAALA
Query: TSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGSS--LVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYF
T Y DTNWYVDTGATDHIT L++LTT+ERY GTDQI A+G G SI H+G++++ S L LK++L+VP+ K+L+SV +L +DN A +E H YF
Subjt: TSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGSS--LVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYF
Query: LVKDRVTKKLLLHGRCKNGLYVLPHNFS-QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQ
L+KD+ T++ +L G C+ GLY LP S + A S +WH RLGHP+ PI +RIL N L +N + S+C+ACQ K HQLPF S VS PL+
Subjt: LVKDRVTKKLLLHGRCKNGLYVLPHNFS-QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQ
Query: LIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLV
LIH+DVWGP+ SV KYYVSF+DD+S++VWIYFL+ KS+V F +FQK VE + KI S+Q+DWGGEY +LH +F GI HH+SCPHTHQQNG V
Subjt: LIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLV
Query: ERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKG
ERKHRHIVE GL+LLA A+MPL +WDEAF A +LINR+PS+ I+ DTPL +LF ++PDY LR FGCACWPNLRPYN KL FR+ +C+FLG+S+ HKG
Subjt: ERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKG
Query: YKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALA---------------KLANFYTENALTDIEPVVSNSHMND----------GQ
+KCL+ STGR+Y+SRDV FDE +FPF P LLP L N NA TDI S ++N G
Subjt: YKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALA---------------KLANFYTENALTDIEPVVSNSHMND----------GQ
Query: TDNIASDNL---------------------------SGVSLSSADNTRSSEEIA---EYEAESSSINAQNQTHEHVSDQPTEAASQHPM---RTRLRNNI
++A ++ SG+ + A + +S A A +SS Q+H+ S P+E+A + +TRL++ I
Subjt: TDNIASDNL---------------------------SGVSLSSADNTRSSEEIA---EYEAESSSINAQNQTHEHVSDQPTEAASQHPM---RTRLRNNI
Query: VQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKAR
+ K +TDGT+RYS ++ EP+ L EA+ W+ AM+ E AL +N TW LVP K G N+ID KWVYKVKRKADGS++R KAR
Subjt: VQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKAR
Query: LVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTG
+VAKGFKQR+G+DY DTF+PV+K +TIR ILS+A+++GW +RQ+D+QNAFLHG+L+E+V+MRQPPG++ + Y+CKL KALYGLKQAP+AW+SRL+
Subjt: LVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTG
Query: KLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCK
KL ELGFK+S +D+SLF ++ ++ML+YVDDII+ SSS AT L++ L +FA+KDLG L YFLGIEVK+ +GI+L+Q +YA+D+LKRVNM CK
Subjt: KLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCK
Query: PMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDADW
++TP+ +EKL +G P E+ +YRS VGALQYLT+TRPDL+F+VNKVCQYLH PT HW A KRILRY+K T+ LG+KI KS ++++S FSDADW
Subjt: PMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDADW
Query: AGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHF
AGC DDR ST GFAVF+G NL+SWS+RKQATVSRSSTEAEYKA+AN+TAE++WI++LL ELG+ K ++WCDN+GA Y+T+NPVFHARTKHIEVD+HF
Subjt: AGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHF
Query: VREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
VRE+VARK ++V +IS+ DQVAD TK LS NNLN+
Subjt: VREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
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| Q75HT9 Putative polyprotein | 0.0e+00 | 49.2 | Show/hide |
Query: MSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIII-NPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGIT
+S+P IS KLT++N+ LW+ QIL LR L + + AP+ I E ++ KI+I NPE+ W+ QDQ VL I SS++ EVL + G
Subjt: MSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIII-NPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGIT
Query: TAREAWITLERQFA------------STIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSI--TTRTDVYTVSDVYAHMLSYEMRHL
TA +AW ++ F+ ++++Y K++ L D +AA GK +++EEL+AY++ GL ++D V + T R ++S VY+ +LSYE R +
Subjt: TAREAWITLERQFA------------STIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSI--TTRTDVYTVSDVYAHMLSYEMRHL
Query: RKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQ--LNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQAALA
R +SAN NR RGG G+RG R GHG+ + + GR + + VCQ+C K H A CWHR+D +Y + L A A
Subjt: RKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQ--LNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQAALA
Query: TSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGSS--LVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYF
T Y DTNWYVDTGATDHIT L++LTT+ERY GTDQI A+G G SI H+G++++ S L LK++L+VP+ K+L+SV +L +DN A +E H YF
Subjt: TSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGSS--LVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYF
Query: LVKDRVTKKLLLHGRCKNGLYVLPHNFS-QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQ
L+KD+ T++ +L G C+ GLY LP S + A S +WH RLGHP+ PI +RIL N L +N + S+C+ACQ K HQLPF S VS PL+
Subjt: LVKDRVTKKLLLHGRCKNGLYVLPHNFS-QALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQ
Query: LIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLV
LIH+DVWGP+ SV KYYVSF+DD+S++VWIYFL+ KS+V F +FQK VE + KI S+Q+DWGGEY +LH +F GI HH+SCPHTHQQNG V
Subjt: LIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQNGLV
Query: ERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKG
ERKHRHIVE GL+LLA A+MPL +WDEAF A +LINR+PS+ I+ DTPL +LF ++PDY LR FGCACWPNLRPYN KL FR+ +C+FLG+S+ HKG
Subjt: ERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKG
Query: YKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALA---------------KLANFYTENALTDIEPVVSNSHMND----------GQ
+KCL+ STGR+Y+SRDV FDE +FPF P LLP L N NA TDI S ++N G
Subjt: YKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALA---------------KLANFYTENALTDIEPVVSNSHMND----------GQ
Query: TDNIASDNL---------------------------SGVSLSSADNTRSSEEIA---EYEAESSSINAQNQTHEHVSDQPTEAASQHPM---RTRLRNNI
++A ++ SG+ + A + +S A A +SS Q+H+ S P+E+A + +TRL++ I
Subjt: TDNIASDNL---------------------------SGVSLSSADNTRSSEEIA---EYEAESSSINAQNQTHEHVSDQPTEAASQHPM---RTRLRNNI
Query: VQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKAR
+ K +TDGT+RYS ++ EP+ L EA+ W+ AM+ E AL +N TW LVP K G N+ID KWVYKVKRKADGS++R KAR
Subjt: VQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKAR
Query: LVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTG
+VAKGFKQR+G+DY DTF+PV+K +TIR ILS+A+++GW +RQ+D+QNAFLHG+L+E+V+MRQPPG++ + Y+CKL KALYGLKQAP+AW+SRL+
Subjt: LVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTG
Query: KLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCK
KL ELGFK+S +D+SLF ++ ++ML+YVDDII+ SSS AT L++ L +FA+KDLG L YFLGIEVK+ +GI+L+Q +YA+D+LKRVNM CK
Subjt: KLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCK
Query: PMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDADW
++TP+ +EKL +G P E+ +YRS VGALQYLT+TRPDL+F+VNKVCQYLH PT HW A KRILRY+K T+ LG+KI KS ++++S FSDADW
Subjt: PMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSDADW
Query: AGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHF
AGC DDR ST GFAVF+G NL+SWS+RKQATVSRSSTEAEYKA+AN+TAE++WI++LL ELG+ K ++WCDN+GA Y+T+NPVFHARTKHIEVD+HF
Subjt: AGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHF
Query: VREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
VRE+VARK ++V +IS+ DQVAD TK LS NNLN+
Subjt: VREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
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| V9GZT4 Copia-like retrotransposon Hopscotch polyprotein | 0.0e+00 | 50.1 | Show/hide |
Query: ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLE
+S KLT+ NYLLW Q+LP +R+ L + G P +TI S+ + + NP + W +DQ VL + SS++ EVLS++V +T+ W TL
Subjt: ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLE
Query: RQF---------------------ASTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMR-HLRK
+ AS++A+YF K++ D L A GK ++DEE ++++L GL D++PLVT++ R+D T D+Y +LSYE R HL+
Subjt: RQF---------------------ASTIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMR-HLRK
Query: GTFEQLSSANNVNRISIRGGANGGRGSRGRSRQLNSGHGQSRRTVNNPGR-----QPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQAAL
G+ + S+ N R RG + G G RG SR G G SR + GR + +SS CQ+C + H AL CW+RFD+ Y + +A
Subjt: GTFEQLSSANNVNRISIRGGANGGRGSRGRSRQLNSGHGQSRRTVNNPGR-----QPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAENNLKQAAL
Query: ATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI--SGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNY
+G S+ WY DTGATDHIT DL+RLT ++YTGTDQI ANG G++IS+IGN+++ S SL L+ +L+VP +K+LISV RL +DN+ +EFH ++
Subjt: ATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI--SGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNY
Query: FLVKDRVTKKLLLHGRCKNGLYVLP--------HNFSQALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQ
FL+KDR TK +LLHG+C++GLY LP HNFS + ++ E WH+RLGHP+ I R++ +NNL +N ++S+C+AC KAHQLP+ S
Subjt: FLVKDRVTKKLLLHGRCKNGLYVLP--------HNFSQALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQ
Query: HVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPH
S+APL LI +DV+GP+I S KYYVSF+DD+S++ WIY LR KSDV F +FQ VE M KI + QSDWGGEY +L+ +FK+ GI H +SCPH
Subjt: HVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPH
Query: THQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFL
THQQNG ERKHRHIVE GLALLAQ++MPL YWD AF A +LINR PS+TI DTPLHKL G +PDYS LR+FGCACWPNLRPYN KL FR+TRC+FL
Subjt: THQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFL
Query: GYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLANFYTENA-----LTDIEPVVSNSHMNDGQTDNIASDNL---
GYS+ HKG+KCL+ STGRIYISRDVVFDE++FPF +LLP + N T++A + P ++ H G ++ S+N
Subjt: GYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLANFYTENA-----LTDIEPVVSNSHMNDGQTDNIASDNL---
Query: ----------------------------SGVSLSS-----ADNTRSSEEIAE------------YEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRLR
+GVS ++ AD+ S +A +A SS+ H+ P AA+ RTRL+
Subjt: ----------------------------SGVSLSS-----ADNTRSSEEIAE------------YEAESSSINAQNQTHEHVSDQPTEAASQHPMRTRLR
Query: NNIVQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERL
+ I + KQFTDGT+RY + + TEP ++ EA+ P+WR AM E AL++N TW LVPP NLID KWV+KVK ADGS++RL
Subjt: NNIVQAKQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERL
Query: KARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSR
KARLVAKGFKQ++G+DY DTFSPV+K STIR++LSLAV++ W++RQ+D+QNAFLHGIL+E VYM+QPPGF D+ P NY C L+K+LYGLKQ P+AW+SR
Subjt: KARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSR
Query: LTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNME
L+ KL LGF S AD SLFI IY+L+YVDDIII SS A + ++ KLK DFA+KDLG L YFLGIEV + DG++L Q +YA DLLKRV ME
Subjt: LTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNME
Query: KCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSD
CKP+ TP+ ++EKL G LS EE KYRS VGALQYLT+TRPDL++A+N+VCQ+LH PTD HW AVKRILR ++ T+ LG+ I+ S ++MLS FSD
Subjt: KCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKS-TMMLSGFSD
Query: ADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVD
ADWAGCPDDR+ST G+A+FLG NLISW+S+KQ+TVSRSSTEAEYKA+AN TAE+IW++SLL ELG+ + PRLWCDNLGATYL+S P+F+ARTKHIEVD
Subjt: ADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVD
Query: FHFVREQVARKAMEVRFISSSDQVADILTKPLS
FHFVR++V K +++R IS++DQVAD TK L+
Subjt: FHFVREQVARKAMEVRFISSSDQVADILTKPLS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.4e-137 | 28.42 | Show/hide |
Query: ENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKII--INPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS
E Y +W +I L Q+++ VDG MP + + +E II ++ F + D ++ + ++ R+ ++L+
Subjt: ENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKII--INPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS
Query: TIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDV-YTVSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGRG
++ +F L L A G +IE+ + I+++L L YD ++T+I T ++ T++ V +L E+ K + ++ V + N +
Subjt: TIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDV-YTVSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGRG
Query: SRGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAEN--NLKQAALATS-------------GYTSDTNWYVDTG
+ ++R V P ++ K S + C CG+ H C+H + + +N N KQ ATS + + +D+G
Subjt: SRGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAYQAEN--NLKQAALATS-------------GYTSDTNWYVDTG
Query: ATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGN----------SLISGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYFLVKDRVT
A+DH+ ND E L TD ++V ++++ G L + + L+ +L+ + +L+SV+RL + +EF K VT
Subjt: ATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGN----------SLISGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYFLVKDRVT
Query: KKLLLHGRCKNGLYVLPH----------NFSQALLTAKLSK--EQWHRRLGHPASPITIRILQDN---NLAIDTNIP-SSSICNACQLGKAHQLPF---G
KNGL V+ + NF + AK WH R GH + + I + N + ++ N+ S IC C GK +LPF
Subjt: KKLLLHGRCKNGLYVLPH----------NFSQALLTAKLSK--EQWHRRLGHPASPITIRILQDN---NLAIDTNIP-SSSICNACQLGKAHQLPF---G
Query: SSQHVSTAPLQLIHTDVWGP-SIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEY--HRLHNYFKSTGIEH
H+ PL ++H+DV GP + ++++ Y+V FVD F+ Y Y ++ KSDV S+F F E N K+ + D G EY + + + GI +
Subjt: SSQHVSTAPLQLIHTDVWGP-SIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEY--HRLHNYFKSTGIEH
Query: HISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTI--QQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSF
H++ PHT Q NG+ ER R I E +++ A + S+W EA TA +LINR+PSR + TP K P LRVFG + +++ NK+ F
Subjt: HISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTI--QQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSF
Query: --RTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFD------------ENIFPFEESKPPNKT-TNPHHPVL-------------LPALAKLANFYTE
++ + IF+GY + G+K + + ++RDVV D E +F + + NK N ++ + L +
Subjt: --RTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFD------------ENIFPFEESKPPNKT-TNPHHPVL-------------LPALAKLANFYTE
Query: NALTDIEPVVSNSHMNDG-QTDNIA----SDNLSGVSLSSADNTRSSEEIAEYEAESS-SINAQNQTHEHVS----DQPTEAASQHPMRTRLRNNIVQAK
N D ++ N+ + DNI S + L+ + + + + E + + + + +++T EH+ D PT+ + R +
Subjt: NALTDIEPVVSNSHMNDG-QTDNIA----SDNLSGVSLSSADNTRSSEEIAEYEAESS-SINAQNQTHEHVS----DQPTEAASQHPMRTRLRNNIVQAK
Query: QFTDGTIRYSETSRKFASAVTITTPII-ETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVA
T I Y+E V I + +Q W A+N EL+A K N TW + N++DS+WV+ VK G+ R KARLVA
Subjt: QFTDGTIRYSETSRKFASAVTITTPII-ETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVA
Query: KGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLI
+GF Q++ +DY +TF+PV + S+ R ILSL + + Q+D++ AFL+G LKEE+YMR P G ++ + +CKL KA+YGLKQA + W L
Subjt: KGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLI
Query: ELGFKASVADSSLFILKNREI--TIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKP
E F S D ++IL I IY+L+YVDD++I + + L F + DL +++F+GI ++ D I LSQ Y +L + NME C
Subjt: ELGFKASVADSSLFILKNREI--TIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKP
Query: MSTPMGSAEKLFREQGIPLSAEEQFK--YRSTVGALQYLTM-TRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKSTMM---LSGFS
+STP+ S K+ E L+++E RS +G L Y+ + TRPDL AVN + +Y W +KR+LRY+KGT+ + + +K+ + G+
Subjt: MSTPMGSAEKLFREQGIPLSAEEQFK--YRSTVGALQYLTM-TRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKSTMM---LSGFS
Query: DADWAGCPDDRRSTSGFAV-FLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIE
D+DWAG DR+ST+G+ NLI W++++Q +V+ SSTEAEY A+ E +W+K LL + + +++ DN G + +NP H R KHI+
Subjt: DADWAGCPDDRRSTSGFAV-FLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIE
Query: VDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPF
+ +HF REQV + + +I + +Q+ADI TKPL F
Subjt: VDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-164 | 31.73 | Show/hide |
Query: WYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS---TIADYFRK-------------VKHLG------DTLAAIGKRIEDEELIAYMLQG
W D+ S I ++++V++ ++ TAR W LE + S T Y +K + HL LA +G +IE+E+ +L
Subjt: WYPQDQLVLSLINSSVTEEVLSTMVGITTAREAWITLERQFAS---TIADYFRK-------------VKHLG------DTLAAIGKRIEDEELIAYMLQG
Query: LGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGR-GSRGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGI
L YD L T+I + DV + +L E + Q R R N GR G+RG+S+ + ++ N PG +
Subjt: LGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLSSANNVNRISIRGGANGGR-GSRGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGI
Query: VCQICGKPNHDALQCWHRFDQAYQAENNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTD--QIQVANGAGLSISHIGNSLIS---GS
+ G+ N D + + N ++ + SG ++ W VDT A+ H T + RY D +++ N + I+ IG+ I G
Subjt: VCQICGKPNHDALQCWHRFDQAYQAENNLKQAALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTD--QIQVANGAGLSISHIGNSLIS---GS
Query: SLVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYFLVKDRVTKKLLL--HGRCKNGLYVLPHNFSQALLTA---KLSKEQWHRRLGHPASPITIRIL
+LVLK + +VP + +LIS +A D + + N K R+TK L+ G + LY Q L A ++S + WH+R+GH S ++IL
Subjt: SLVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYFLVKDRVTKKLLL--HGRCKNGLYVLPHNFSQALLTA---KLSKEQWHRRLGHPASPITIRIL
Query: QDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGP-SIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETML
+L + C+ C GK H++ F +S L L+++DV GP I S+ +KY+V+F+DD SR +W+Y L+ K V VF +F VE
Subjt: QDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGP-SIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETML
Query: NTKIRSVQSDWGGEY--HRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFG
K++ ++SD GGEY Y S GI H + P T Q NG+ ER +R IVE ++L A +P S+W EA TAC+LINR PS + + P
Subjt: NTKIRSVQSDWGGEY--HRLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFG
Query: KSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLANFYT
K YS L+VFGC + ++ KL ++ CIF+GY GY+ + ++ SRDVVF E+
Subjt: KSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPFEESKPPNKTTNPHHPVLLPALAKLANFYT
Query: ENALTDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQH-PMRTRLRNNIVQAKQFTDGTIR
D+ V N + + T S+N + ++ + + E+ E + ++ + EH PT+ QH P+R R +
Subjt: ENALTDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQH-PMRTRLRNNIVQAKQFTDGTIR
Query: YSETSRKFASAVTITTPIIETATEPRNLQEAMQHP---RWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQR
SR++ S + +I EP +L+E + HP + AM +E+ +L++N T+ LV G + KWV+K+K+ D + R KARLV KGF+Q+
Subjt: YSETSRKFASAVTITTPIIETATEPRNLQEAMQHP---RWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQR
Query: FGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKA
G+D+ + FSPV+K ++IR ILSLA + + Q+D++ AFLHG L+EE+YM QP GF+ + K K+ +CKL K+LYGLKQAP+ W+ + + +
Subjt: FGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKA
Query: SVADSSLFILKNREIT-IYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEV--KKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPM
+ +D ++ + E I +L+YVDD++IV +L L F +KDLG + LG+++ ++T + LSQ +Y +L+R NM+ KP+STP+
Subjt: SVADSSLFILKNREIT-IYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEV--KKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPM
Query: GSAEKLFREQGIPLSAEE-----QFKYRSTVGALQY-LTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKSTMMLSGFSDADWA
KL ++ P + EE + Y S VG+L Y + TRPD+A AV V ++L P HW AVK ILRY++GT + S +L G++DAD A
Subjt: GSAEKLFREQGIPLSAEE-----QFKYRSTVGALQY-LTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQKSTMMLSGFSDADWA
Query: GCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFV
G D+R+S++G+ ISW S+ Q V+ S+TEAEY A EMIW+K L+ELG++Q K ++CD+ A L+ N ++HARTKHI+V +H++
Subjt: GCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFV
Query: REQVARKAMEVRFISSSDQVADILTKPLSKTPF
RE V ++++V IS+++ AD+LTK + + F
Subjt: REQVARKAMEVRFISSSDQVADILTKPLSKTPF
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 5.1e-55 | 49.12 | Show/hide |
Query: IYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQ
+Y+L+YVDDI++ SS+ LI +L F++KDLG + YFLGI++K G+ LSQ +YA +L M CKPMSTP+ +
Subjt: IYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQ
Query: FKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQK-STMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWS
+RS VGALQYLT+TRPD+++AVN VCQ +H PT A + +KR+LRYVKGT+ G+ I K S + + F D+DWAGC RRST+GF FLG N+ISWS
Subjt: FKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQK-STMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWS
Query: SRKQATVSRSSTEAEYKAIANLTAEMIW
+++Q TVSRSSTE EY+A+A AE+ W
Subjt: SRKQATVSRSSTEAEYKAIANLTAEMIW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.6e-280 | 38.94 | Show/hide |
Query: NTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGI
N S +++ KLT NYL+WS Q+ L GF+DGS P TI + + +NP++T W QD+L+ S + +++ V +
Subjt: NTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVGI
Query: TTAREAWITLERQFAS---------------------TIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHM
TTA + W TL + +A+ TI DY + + D LA +GK ++ +E + +L+ L +Y P++ I + T+++++ +
Subjt: TTAREAWITLERQFAS---------------------TIADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHM
Query: LSYEMRHLRKGTFEQL----SSANNVNRISIRGGANGGRGSR--GRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAY
L++E + L + + ++ ++ N + NG R +R R+ NS Q T +P SK CQICG H A +C Q +
Subjt: LSYEMRHLRKGTFEQL----SSANNVNRISIRGGANGGRGSR--GRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIVCQICGKPNHDALQCWHRFDQAY
Query: QAENNLKQ-----------AALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGSS--LVLKHILYVPKINK
+ N +Q A LA S NW +D+GAT HIT+D L+ + YTG D + VA+G+ + ISH G++ +S S L L +ILYVP I+K
Subjt: QAENNLKQ-----------AALATSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLISGSS--LVLKHILYVPKINK
Query: HLISVQRLASDNNAVVEFHPNYFLVKDRVTKKLLLHGRCKNGLYVLPHNFSQ-----ALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSS
+LISV RL + N VEF P F VKD T LL G+ K+ LY P SQ A ++K + WH RLGHPA I ++ + +L++
Subjt: HLISVQRLASDNNAVVEFHPNYFLVKDRVTKKLLLHGRCKNGLYVLPHNFSQ-----ALLTAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSS
Query: ICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYH
C+ C + K++++PF S ST PL+ I++DVW I S +N +YYV FVD F+RY W+Y L+ KS V+ F+ F+ +E T+I + SD GGE+
Subjt: ICNACQLGKAHQLPFGSSQHVSTAPLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYH
Query: RLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPN
L YF GI H S PHT + NGL ERKHRHIVETGL LL+ A++P +YW AF A +LINR+P+ +Q ++P KLFG SP+Y LRVFGCAC+P
Subjt: RLHNYFKSTGIEHHISCPHTHQQNGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPN
Query: LRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPF--------------EESK----------------PPNKTTNPHHPVL
LRPYN KL ++ +C+FLGYS + Y CL+ T R+YISR V FDEN FPF ES P ++PHH
Subjt: LRPYNNKKLSFRTTRCIFLGYSSSHKGYKCLNRSTGRIYISRDVVFDENIFPF--------------EESK----------------PPNKTTNPHHPVL
Query: LP------------ALAKLANFYTENALTDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQ
P + + L + ++ + + EP + T + + S +++ N ++E ++ A+S S AQ+ + S PT +AS
Subjt: LP------------ALAKLANFYTENALTDIEPVVSNSHMNDGQTDNIASDNLSGVSLSSADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQPTEAASQ
Query: H--------------PMRTRLRNNIVQA-----KQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVP
P ++ NN QA T + + K++ AV++ +EPR +A++ RWR AM E++A N TWDLVP
Subjt: H--------------PMRTRLRNNIVQA-----KQFTDGTIRYSETSRKFASAVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVP
Query: PKPG-INLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQD
P P + ++ +W++ K +DGS+ R KARLVAKG+ QR G+DY +TFSPVIK ++IR++L +AV + W +RQ+D+ NAFL G L ++VYM QPPGF D
Subjt: PKPG-INLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQD
Query: SAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLG
+P NY+CKL+KALYGLKQAP+AW+ L L+ +GF SV+D+SLF+L+ + +YML+YVDDI+I + + L F+VKD L YFLG
Subjt: SAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLG
Query: IEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKR
IE K+ G+ LSQRRY LDLL R NM KP++TPM + KL G L+ + +YR VG+LQYL TRPD+++AVN++ Q++H PT+ H A+KR
Subjt: IEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKR
Query: ILRYVKGTLALGVKIQK-STMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAP
ILRY+ GT G+ ++K +T+ L +SDADWAG DD ST+G+ V+LG + ISWSS+KQ V RSSTEAEY+++AN ++EM WI SLL ELG+ ++ P
Subjt: ILRYVKGTLALGVKIQK-STMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAP
Query: RLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
++CDN+GATYL +NPVFH+R KHI +D+HF+R QV A+ V +S+ DQ+AD LTKPLS+T F + + +
Subjt: RLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNM
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.1e-279 | 38.68 | Show/hide |
Query: NNTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVG
N + + ++S V KLT NYL+WS Q+ L GF+DGS P P TI + +NP++T W QD+L+ S I +++ V +
Subjt: NNTMSSPSISQVISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLVLSLINSSVTEEVLSTMVG
Query: ITTAREAWITLERQFASTIADYFRKVKHLG--DTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLSS
TTA + W TL + +A+ + +++ + D LA +GK ++ +E + +L+ L DY P++ I + ++++++ +++ E + L + E +
Subjt: ITTAREAWITLERQFASTIADYFRKVKHLG--DTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMRHLRKGTFEQLSS
Query: ANNVNRISIRG-GANGGRGSRGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIV--CQICGKPNHDALQC--WHRFDQAYQAENNLK-------QAALA
NV ++ R N + +RG +R N+ + +S + S + + CQIC H A +C H+F + + +A LA
Subjt: ANNVNRISIRG-GANGGRGSRGRSRQLNSGHGQSRRTVNNPGRQPSKTQSSSGIV--CQICGKPNHDALQC--WHRFDQAYQAENNLK-------QAALA
Query: TSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI--SGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYF
+ + NW +D+GAT HIT+D L+ + YTG D + +A+G+ + I+H G++ + S SL L +LYVP I+K+LISV RL + N VEF P F
Subjt: TSGYTSDTNWYVDTGATDHITNDLERLTTRERYTGTDQIQVANGAGLSISHIGNSLI--SGSSLVLKHILYVPKINKHLISVQRLASDNNAVVEFHPNYF
Query: LVKDRVTKKLLLHGRCKNGLYVLPHNFSQALL-----TAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVST
VKD T LL G+ K+ LY P SQA+ +K + WH RLGHP+ I ++ +++L + C+ C + K+H++PF +S S+
Subjt: LVKDRVTKKLLLHGRCKNGLYVLPHNFSQALL-----TAKLSKEQWHRRLGHPASPITIRILQDNNLAIDTNIPSSSICNACQLGKAHQLPFGSSQHVST
Query: APLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQ
PL+ I++DVW I S++N +YYV FVD F+RY W+Y L+ KS V+ F+ F+ VE T+I ++ SD GGE+ L +Y GI H S PHT +
Subjt: APLQLIHTDVWGPSIASVNNSKYYVSFVDDFSRYVWIYFLRCKSDVESVFLQFQKHVETMLNTKIRSVQSDWGGEYHRLHNYFKSTGIEHHISCPHTHQQ
Query: NGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSS
NGL ERKHRHIVE GL LL+ A++P +YW AF+ A +LINR+P+ +Q +P KLFG+ P+Y L+VFGCAC+P LRPYN KL ++ +C F+GYS
Subjt: NGLVERKHRHIVETGLALLAQANMPLSYWDEAFNTACFLINRMPSRTIQQDTPLHKLFGKSPDYSMLRVFGCACWPNLRPYNNKKLSFRTTRCIFLGYSS
Query: SHKGYKCLNRSTGRIYISRDVVFDENIFPF--------------EESKP--PNKTTNPHHPVLLPALAKLANFYTENALTDIEPVVSNSHMNDGQTDNIA
+ Y CL+ TGR+Y SR V FDE FPF +S P P+ TT P P++LPA L + T P S S + T ++
Subjt: SHKGYKCLNRSTGRIYISRDVVFDENIFPF--------------EESKP--PNKTTNPHHPVLLPALAKLANFYTENALTDIEPVVSNSHMNDGQTDNIA
Query: SDNLSGVSLSSADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQP--------TEAASQHPMRTRLRNNIVQAKQFTDGTIRYSETSRKFASA-------
S NL S+SS SSE A +QT S+ P + + + + L + + + + SE + +S+
Subjt: SDNLSGVSLSSADNTRSSEEIAEYEAESSSINAQNQTHEHVSDQP--------TEAASQHPMRTRLRNNIVQAKQFTDGTIRYSETSRKFASA-------
Query: -VTITTPIIE----------------------------------TATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLV-PPKPGINLIDSKWVYKVK
V PII+ +EPR +AM+ RWR AM E++A N TWDLV PP P + ++ +W++ K
Subjt: -VTITTPIIE----------------------------------TATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLV-PPKPGINLIDSKWVYKVK
Query: RKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGL
+DGS+ R KARLVAKG+ QR G+DY +TFSPVIK ++IR++L +AV + W +RQ+D+ NAFL G L +EVYM QPPGF D +P +Y+C+L+KA+YGL
Subjt: RKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVILSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGFQDSAKPKNYICKLKKALYGL
Query: KQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYA
KQAP+AW+ L L+ +GF S++D+SLF+L+ IYML+YVDDI+I + + + L F+VK+ L YFLGIE K+ G+ LSQRRY
Subjt: KQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYA
Query: LDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQK-
LDLL R NM KP++TPM ++ KL G L + +YR VG+LQYL TRPDL++AVN++ QY+H PTD HW A+KR+LRY+ GT G+ ++K
Subjt: LDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQK-
Query: STMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVF
+T+ L +SDADWAG DD ST+G+ V+LG + ISWSS+KQ V RSSTEAEY+++AN ++E+ WI SLL ELG+ S P ++CDN+GATYL +NPVF
Subjt: STMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSRKQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVF
Query: HARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNMYK
H+R KHI +D+HF+R QV A+ V +S+ DQ+AD LTKPLS+ F + + K
Subjt: HARTKHIEVDFHFVREQVARKAMEVRFISSSDQVADILTKPLSKTPFTTHCNNLNMYK
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 3.7e-08 | 22.22 | Show/hide |
Query: ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLV-LSLINSSVTEEVLSTMVGITTAREAWITL
+ + + + NY W L + S +++G +DG++ + N W +D +V LSL + ++ + V +T+R+ W+ +
Subjt: ISVKLTQENYLLWSTQILPYLRSQNLVGFVDGSMPAPSQTIAVEPSEETGNRKIIINPEFTVWYPQDQLV-LSLINSSVTEEVLSTMVGITTAREAWITL
Query: ERQFAST---------------------IADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMR----
+ QF + +ADY+RK+K L D+L + + D L+ Y+L GL P +D ++ I R + D + E R
Subjt: ERQFAST---------------------IADYFRKVKHLGDTLAAIGKRIEDEELIAYMLQGLGPDYDPLVTSITTRTDVYTVSDVYAHMLSYEMR----
Query: ---------HLRKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQLNSGHGQSRRTVNNP
H T S A V GG G RGR + G G N P
Subjt: ---------HLRKGTFEQLSSANNVNRISIRGGANGGRGSRGRSRQLNSGHGQSRRTVNNP
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 2.5e-113 | 43.98 | Show/hide |
Query: IETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVI
I A EP EA + W GAM+DE+ A++ TW++ P I KWVYK+K +DG++ER KARLVAKG+ Q+ G+D+ +TFSPV K +++++I
Subjt: IETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVIKPSTIRVI
Query: LSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGF---QDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIY
L+++ + + Q+DI NAFL+G L EE+YM+ PPG+ Q + P N +C LKK++YGLKQA + W + + LI GF S +D + F+ + +
Subjt: LSLAVTKGWNMRQVDIQNAFLHGILKEEVYMRQPPGF---QDSAKPKNYICKLKKALYGLKQAPKAWHSRLTGKLIELGFKASVADSSLFILKNREITIY
Query: MLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFK
+L+YVDDIII S++D A + L +LK F ++DLG L+YFLG+E+ ++ GI + QR+YALDLL + CKP S PM + G +
Subjt: MLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQFK
Query: YRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGV-KIQKSTMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSR
YR +G L YL +TR D++FAVNK+ Q+ P AH AV +IL Y+KGT+ G+ ++ M L FSDA + C D RRST+G+ +FLG +LISW S+
Subjt: YRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGV-KIQKSTMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWSSR
Query: KQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVARKA
KQ VS+SS EAEY+A++ T EM+W+ +EL + SK L+CDN A ++ +N VFH RTKHIE D H VRE+ +A
Subjt: KQATVSRSSTEAEYKAIANLTAEMIWIKSLLKELGVYQSKAPRLWCDNLGATYLTSNPVFHARTKHIEVDFHFVREQVARKA
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 1.2e-14 | 47.73 | Show/hide |
Query: YLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQ-KSTMMLSGFSDADWAGCPDDRRSTSGFAV-----FLGA
YLT+TRPDL FAVN++ Q+ A AV ++L YVKGT+ G+ S + L F+D+DWA CPD RRS +GF FLGA
Subjt: YLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQ-KSTMMLSGFSDADWAGCPDDRRSTSGFAV-----FLGA
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 3.6e-56 | 49.12 | Show/hide |
Query: IYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQ
+Y+L+YVDDI++ SS+ LI +L F++KDLG + YFLGI++K G+ LSQ +YA +L M CKPMSTP+ +
Subjt: IYMLIYVDDIIIVSSSDQATERLIQKLKIDFAVKDLGGLEYFLGIEVKKTRDGIILSQRRYALDLLKRVNMEKCKPMSTPMGSAEKLFREQGIPLSAEEQ
Query: FKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQK-STMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWS
+RS VGALQYLT+TRPD+++AVN VCQ +H PT A + +KR+LRYVKGT+ G+ I K S + + F D+DWAGC RRST+GF FLG N+ISWS
Subjt: FKYRSTVGALQYLTMTRPDLAFAVNKVCQYLHTPTDAHWGAVKRILRYVKGTLALGVKIQK-STMMLSGFSDADWAGCPDDRRSTSGFAVFLGANLISWS
Query: SRKQATVSRSSTEAEYKAIANLTAEMIW
+++Q TVSRSSTE EY+A+A AE+ W
Subjt: SRKQATVSRSSTEAEYKAIANLTAEMIW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 6.2e-24 | 49.11 | Show/hide |
Query: AVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVI
++TITT I EP+++ A++ P W AM +EL AL RN TW LVPP N++ KWV+K K +DG+++RLKARLVAKGF Q G+ + +T+SPV+
Subjt: AVTITTPIIETATEPRNLQEAMQHPRWRGAMNDELSALKRNATWDLVPPKPGINLIDSKWVYKVKRKADGSVERLKARLVAKGFKQRFGVDYTDTFSPVI
Query: KPSTIRVILSLA
+ +TIR IL++A
Subjt: KPSTIRVILSLA
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