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CmoCh10G002630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh10G002630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATP-dependent helicase/nuclease subunit A isoform 1
Genome locationCmo_Chr10:1170524..1171507
RNA-Seq ExpressionCmoCh10G002630
SyntenyCmoCh10G002630
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023244.1 hypothetical protein SDJN02_14269, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-3397.53Show/hide
Query:  TLPKDLNLRRKGSREIWKMMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
        TLPKDLNLRRKGS EIWKMMGSSRSWAY RIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
Subjt:  TLPKDLNLRRKGSREIWKMMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
XP_008453375.1 PREDICTED: uncharacterized protein LOC103494113 [Cucumis melo]4.2e-2279.22Show/hide
Query:  KDLNLRRKGSREIWKMMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
        K  + +R  S E  KM+GSSR WAY RIIAGTIVGGVLGFYVMHRVEVGYKEKMKERL+QYE ELKKKE+MKELEDS
Subjt:  KDLNLRRKGSREIWKMMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
XP_022922063.1 uncharacterized protein LOC111430128 [Cucurbita moschata]1.3e-23100Show/hide
Query:  MMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
        MMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
Subjt:  MMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
XP_022987318.1 uncharacterized protein LOC111484905 [Cucurbita maxima]2.2e-3992.63Show/hide
Query:  MLRKFEFHPNNTDRTLPKDLNLRRKGSREIWKMMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
        M RKF+FHPNNT  TLPKDLNLRR+GS EIWKMMGSSR+WAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
Subjt:  MLRKFEFHPNNTDRTLPKDLNLRRKGSREIWKMMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
XP_023516642.1 uncharacterized protein LOC111780454 [Cucurbita pepo subsp. pepo]2.9e-2398.41Show/hide
Query:  MMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
        MMGSSR+WAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
Subjt:  MMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
TrEMBL top hitse value%identityAlignment
A0A1S3BW37 uncharacterized protein LOC1034941132.0e-2279.22Show/hide
Query:  KDLNLRRKGSREIWKMMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
        K  + +R  S E  KM+GSSR WAY RIIAGTIVGGVLGFYVMHRVEVGYKEKMKERL+QYE ELKKKE+MKELEDS
Subjt:  KDLNLRRKGSREIWKMMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
A0A5A7USD3 ATP-dependent helicase/nuclease subunit A isoform 13.2e-2090.32Show/hide
Query:  MMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
        M+GSSR WAY RIIAGTIVGGVLGFYVMHRVEVGYKEKMKERL+QYE ELKKKE+MKELEDS
Subjt:  MMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
A0A6J1BYI4 uncharacterized protein LOC1110068982.7e-1987.1Show/hide
Query:  MMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
        M+G+ R WAY+RII GTIVGGVLGFYVMHRVEVGYKEK+KERLRQYE ELKKKEQMKELEDS
Subjt:  MMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDS
A0A6J1E2A1 uncharacterized protein LOC1114301286.3e-24100Show/hide
Query:  MMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
        MMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
Subjt:  MMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
A0A6J1JJ44 uncharacterized protein LOC1114849051.1e-3992.63Show/hide
Query:  MLRKFEFHPNNTDRTLPKDLNLRRKGSREIWKMMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
        M RKF+FHPNNT  TLPKDLNLRR+GS EIWKMMGSSR+WAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
Subjt:  MLRKFEFHPNNTDRTLPKDLNLRRKGSREIWKMMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18510.1 unknown protein4.2e-1257.14Show/hide
Query:  SSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKEL
        SS +W Y RIIAGT++GG LGFYVMHR+EV YK +M+E L QYE +++K+++ + L
Subjt:  SSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKEL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAGAAAGTTCGAGTTTCATCCCAACAATACAGATAGGACACTTCCAAAGGATCTCAATTTGAGAAGGAAAGGGAGCCGTGAAATTTGGAAAATGATGGGCAGTTC
CCGTTCATGGGCTTATATGCGGATCATCGCCGGTACCATTGTCGGCGGTGTTCTTGGCTTCTATGTAATGCACCGCGTTGAAGTTGGCTATAAGGAGAAGATGAAAGAAA
GATTAAGACAATACGAAATCGAACTAAAGAAGAAAGAACAAATGAAAGAGCTTGAAGACTCGTCATAG
mRNA sequenceShow/hide mRNA sequence
AATTAGTCGATGTGCGACTTTCATCATCCAACAAAATTGACTGATTCATGCTGAGAAAGTTCGAGTTTCATCCCAACAATACAGATAGGACACTTCCAAAGGATCTCAAT
TTGAGAAGGAAAGGGAGCCGTGAAATTTGGAAAATGATGGGCAGTTCCCGTTCATGGGCTTATATGCGGATCATCGCCGGTACCATTGTCGGCGGTGTTCTTGGCTTCTA
TGTAATGCACCGCGTTGAAGTTGGCTATAAGGAGAAGATGAAAGAAAGATTAAGACAATACGAAATCGAACTAAAGAAGAAAGAACAAATGAAAGAGCTTGAAGACTCGT
CATAG
Protein sequenceShow/hide protein sequence
MLRKFEFHPNNTDRTLPKDLNLRRKGSREIWKMMGSSRSWAYMRIIAGTIVGGVLGFYVMHRVEVGYKEKMKERLRQYEIELKKKEQMKELEDSS