CuGenDBv2

Gene ID	CmoCh10G002910
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	suppressor of phytochrome b 5
Genome location	Cmo_Chr10:1291459..1296434
RNA-Seq Expression	CmoCh10G002910
Synteny	CmoCh10G002910
Gene Ontology terms	GO:0009691 - cytokinin biosynthetic process (biological process) GO:0009736 - cytokinin-activated signaling pathway (biological process)
InterPro domains	IPR044670 - SOB-five-Like (SOFL) family

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6589579.1 hypothetical protein SDJN03_15002, partial [Cucurbita argyrosperma subsp. sororia]

3.3e-73

97.4

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Query:  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQN
        MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQN
Subjt:  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQN

Query:  KPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
        KPNSCF+T  KPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARK IWMGKRN
Subjt:  KPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN

XP_022921472.1 uncharacterized protein LOC111429737 isoform X1 [Cucurbita moschata]

5.8e-78

100

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Query:  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ
        VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ
Subjt:  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ

Query:  NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
        NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
Subjt:  NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN

XP_022921474.1 uncharacterized protein LOC111429737 isoform X2 [Cucurbita moschata]

5.8e-78

100

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Query:  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ
        VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ
Subjt:  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ

Query:  NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
        NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
Subjt:  NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN

XP_022921475.1 uncharacterized protein LOC111429737 isoform X3 [Cucurbita moschata]

2.2e-77

100

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Query:  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQN
        MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQN
Subjt:  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQN

Query:  KPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
        KPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
Subjt:  KPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN

XP_023516938.1 uncharacterized protein LOC111780698 [Cucurbita pepo subsp. pepo]

2.4e-71

96.15

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Query:  MEPSQMFGVSEECHSSESGWTMYIGSP--AAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTH
        MEPSQMFGVSEECHSSESGWTMYIGSP  AAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTH
Subjt:  MEPSQMFGVSEECHSSESGWTMYIGSP--AAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTH

Query:  QNKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
        QNKPNSC ET  KPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARK IWMGKRN
Subjt:  QNKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN

TrEMBL top hits

e value

%identity

Alignment

A0A6J1E0K4 uncharacterized protein LOC111429737 isoform X3

1.1e-77

100

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Query:  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQN
        MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQN
Subjt:  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQN

Query:  KPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
        KPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
Subjt:  KPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN

A0A6J1E0K6 uncharacterized protein LOC111429737 isoform X2

2.8e-78

100

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Query:  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ
        VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ
Subjt:  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ

Query:  NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
        NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
Subjt:  NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN

A0A6J1E405 uncharacterized protein LOC111429737 isoform X1

2.8e-78

100

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Query:  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ
        VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ
Subjt:  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ

Query:  NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
        NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
Subjt:  NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN

A0A6J1JFR5 uncharacterized protein LOC111485335 isoform X2

2.5e-71

96.13

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Query:  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ
        VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASD EEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ
Subjt:  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ

Query:  NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
        NKPNSC ET  KPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARK IWMGKR+
Subjt:  NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN

A0A6J1JKS2 uncharacterized protein LOC111485335 isoform X1

2.5e-71

96.13

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Query:  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ
        VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASD EEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ
Subjt:  VMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQ

Query:  NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN
        NKPNSC ET  KPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARK IWMGKR+
Subjt:  NKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKARKCIWMGKRN

SwissProt top hits

e value

%identity

Alignment

Q9FKQ9 Protein SOB FIVE-LIKE 4

3.1e-05

46.15

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Query:  EECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDIN-----------QDDSDDSMASDASSGPSHQQ
        EEC SSESGWT Y+ SP   D    VD        ED  ++GY   N             DSDDSMASDASSGP++Q+
Subjt:  EECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDIN-----------QDDSDDSMASDASSGPSHQQ

Q9LEZ1 Protein SUPPRESSOR OF PHYTOCHROME B 5

4.4e-04

43.84

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Query:  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGP
        ME + +FG  E+C S ESGWTMY+   A+     D D     D+EE+E+          D  DSM SDASSGP
Subjt:  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGP

Arabidopsis top hits

e value

%identity

Alignment

AT1G26210.1 SOB five-like 1

9.1e-05

43.04

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Query:  EECHSSESGWTMYI---------GSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRH
        EE  S ESGWTMYI          S    D   D     A D  E+++     D   ++SDDSMASDASSGPS+Q  +H
Subjt:  EECHSSESGWTMYI---------GSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRH

AT5G08150.1 suppressor of phytochrome b 5

3.1e-05

43.84

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Query:  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGP
        ME + +FG  E+C S ESGWTMY+   A+     D D     D+EE+E+          D  DSM SDASSGP
Subjt:  MEPSQMFGVSEECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGP

AT5G38790.1 unknown protein

2.2e-06

46.15

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Query:  EECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDIN-----------QDDSDDSMASDASSGPSHQQ
        EEC SSESGWT Y+ SP   D    VD        ED  ++GY   N             DSDDSMASDASSGP++Q+
Subjt:  EECHSSESGWTMYIGSPAAADGSSDVDTGAASDEEEDEEHKGYYDIN-----------QDDSDDSMASDASSGPSHQQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAGATGCGAAATTCTCCTATCAACGACGACAAAGAAAAACCAAGCAAGAACACAGGAAACGAGCAGTTTGATACTACTCCAAATATAGCCGTAATCATGGCTGGGGA
TGATCATCCCAGGATTAGTTCATCTCTTACTCGAAAATTAAGTCCCATAGACCTGAAATCAGATGGCAACCGTAGTTTACAGAGAAACATACTACATGCTCATGAGAACC
CAGAAGTTATGGAGCCATCCCAAATGTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCCCCTGCAGCTGCTGATGGTTCCAGT
GATGTTGATACTGGTGCAGCTTCTGATGAAGAAGAAGATGAAGAACACAAAGGCTATTATGATATTAACCAAGATGACAGCGATGACTCCATGGCTTCTGATGCTTCTTC
AGGCCCAAGTCATCAACAAAGACGCCACCCATTTGGAGGGATGAAGAATCCCCCCCATGCTTTGCTGCCTCTCTTCACCCACCAGAACAAGCCAAACTCTTGCTTCGAAA
CCAAACCCAAACCCAAGCCCAAACCCAAGAAGCCATTAAAGAAGAAGCAAAGAGCTGAAAGAAAAGAAGTGAAAGAGCCAAAGAGCTCAGTTCAGAGCAGCTCCAAGGCA
AGAAAGTGCATCTGGATGGGTAAAAGAAACTAA

mRNA sequence

Show/hide mRNA sequence

AGGGAACTCTCCCATCCCATATATCTTTGGAGGTTTCGCCATTGTTTTTGGAATCACTTCTGCTGTTCTTTTTTTCCTTGCTTGCTCTCACCAAATGCAGATGCGAAATT
CTCCTATCAACGACGACAAAGAAAAACCAAGCAAGAACACAGGAAACGAGCAGTTTGATACTACTCCAAATATAGCCGTAATCATGGCTGGGGATGATCATCCCAGGATT
AGTTCATCTCTTACTCGAAAATTAAGTCCCATAGACCTGAAATCAGATGGCAACCGTAGTTTACAGAGAAACATACTACATGCTCATGAGAACCCAGAAGTTATGGAGCC
ATCCCAAATGTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCCCCTGCAGCTGCTGATGGTTCCAGTGATGTTGATACTGGTG
CAGCTTCTGATGAAGAAGAAGATGAAGAACACAAAGGCTATTATGATATTAACCAAGATGACAGCGATGACTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAA
CAAAGACGCCACCCATTTGGAGGGATGAAGAATCCCCCCCATGCTTTGCTGCCTCTCTTCACCCACCAGAACAAGCCAAACTCTTGCTTCGAAACCAAACCCAAACCCAA
GCCCAAACCCAAGAAGCCATTAAAGAAGAAGCAAAGAGCTGAAAGAAAAGAAGTGAAAGAGCCAAAGAGCTCAGTTCAGAGCAGCTCCAAGGCAAGAAAGTGCATCTGGA
TGGGTAAAAGAAACTAAGGGGAAGAAGCTCAGTTCTTCTCTTCATTGGGTATTTCATTTATGTTTGTTCCTATGTTTTCCTCTACTTATGTTCTGTGGTTCCTGTTCTTT
TTGTGTAACAAGCAGCCATTTATTTACAACAATCCAGACAAACAAACTACAGTGATCCATATGAGCTTCACATTAGCCATTAATGGATGTTTTTCCTTACAGAAACCGAG
CTTCTAAAGAAC

Protein sequence

Show/hide protein sequence

MQMRNSPINDDKEKPSKNTGNEQFDTTPNIAVIMAGDDHPRISSSLTRKLSPIDLKSDGNRSLQRNILHAHENPEVMEPSQMFGVSEECHSSESGWTMYIGSPAAADGSS
DVDTGAASDEEEDEEHKGYYDINQDDSDDSMASDASSGPSHQQRRHPFGGMKNPPHALLPLFTHQNKPNSCFETKPKPKPKPKKPLKKKQRAERKEVKEPKSSVQSSSKA
RKCIWMGKRN

CmoCh10G002910 (gene) of Cucurbita moschata (Rifu) v1 genome